Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320
| | | | | | | | | | | | | | | | |
| SS Seq | CSSSSSCCSSSSCCSSSSSSCSSCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCSSSCCCCCCCHHHHHHHHHCCCSSSSCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCSSSSSCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCSSSSSCCCCCCCCCCCCCCSSSCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCSSSSCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCSSSSSSSSSSSCCCCCCCCCCCCCCCCSSCCCCCSCHHHHHHHHHHHCCCCCSSCCCCCCCCSSCCCCCCC RTVAVTKSQFLINGKPFYFHGVNKHEDADIRGKGFDWPLLVKDFNLLRWLGANAFRTSHYPYAEEVMQMCDRYGIVVIDECPGVGLALPQFFNNVSLHHHMQVMEEVVRRDKNHPAVVMWSVANEPASHLESAGYYLKMVIAHTKSLDPSRPVTFVSNSNYAADKGAPYVDVICLNSYYSWYHDYGHLELIQLQLATQFENWYKKYQKPIIQSEYGAETIAGFHQDPPLMFTEEYQKSLLEQYHLGLDQKRRKYVVGELIWNFADFMTEQSPTRVLGNKKGIFTRQRQPKSAAFLLRERYWKIANETRYPHSVAKSQCLENSLFT |
1 | 1bhgA | 0.96 | 0.89 | 25.02 | 1.50 | DEthreader | | RTVAVTKSQFLINGKPFYFHGVNKHEDADIRGKGFDWPLLVKDFNLLRWLGANAFRTSHYPYAE-EVMQMCDYGIVVIDECPGVGLALPQFFNNVSLHHHMQVMEEVVRRDKNHPAVVMWSVANEPASHLESAGYYLKMVIAHTKSLDPSRPVTFVSNSNYAADKGAPYVDVICLNSYYSWYHDYGHLELIQLQLATQFENWYKKYQKPIIQSEYGAETIAGFHQ-PPLMFTEEYQKSLLEQYHLGLDQKRRKYVVGELIWNFADF-MTEQSPRVLGNKKGIFTRQRQPKSAAFLLRERYWKIANE------------------- |
2 | 6xxwA2 | 0.56 | 0.53 | 15.32 | 1.74 | SPARKS-K | | RTVRVEGKQFLINEKPFYFKGFGKHEDSDIRGKGLDQVINIKDFNLLKWIGANSFRTSHYPYSEEILFLADQYGIAVIEEAPAVGLNLWNRVDGKTLEHHLEIMRELIARDKNHPSVIMWSVANEAATYEDGAEEYFRRVIEETRRLDPTRPITIVENTKASETKVSKYVDVICVNRYYSWYTDSGDLSVIEYQLERDLREWYELYRKPIILSEFGADAISGFHSDPPLMFTEEYQQEMIKRFVGVLDRL--DFVVGEHIWNFADFMTKQSITRVVGNKKGVFTRNRQPKMVAHFLKERWSKLPDFWEK---------------- |
3 | 6xxwA2 | 0.57 | 0.53 | 15.21 | 0.50 | MapAlign | | RTVRVEGKQFLINEKPFYFKGFGKHEDSDIRGKGLDQVINIKDFNLLKWIGANSFRTSHYPYSEEILFLADQYGIAVIEEAPAVGLVFTGRVDGKTLEHHLEIMRELIARDKNHPSVIMWSVANEAATYEDGAEEYFRRVIEETRRLDPTRPITIVENTKASETKVSKYVDVICVNRYYSWYTDSGDLSVIEYQLERDLREWYELYRKPIILSEFGADAISGFHSDPPLMFTEEYQQEMIKRFVGVLDRL--DFVVGEHIWNFADFMTKQSITRVVGNKKGVFTRNRQPKMVAHFLKERWSK----------------------- |
4 | 6xxwA2 | 0.56 | 0.53 | 15.32 | 0.36 | CEthreader | | RTVRVEGKQFLINEKPFYFKGFGKHEDSDIRGKGLDQVINIKDFNLLKWIGANSFRTSHYPYSEEILFLADQYGIAVIEEAPAVGLNLEGRVDGKTLEHHLEIMRELIARDKNHPSVIMWSVANEAATYEDGAEEYFRRVIEETRRLDPTRPITIVENTKASETKVSKYVDVICVNRYYSWYTDSGDLSVIEYQLERDLREWYELYRKPIILSEFGADAISGFHSDPPLMFTEEYQQEMIKRFVGVLDRL--DFVVGEHIWNFADFMTKQSITRVVGNKKGVFTRNRQPKMVAHFLKERWSKLPDFWEK---------------- |
5 | 1bhgA | 0.99 | 0.93 | 26.03 | 1.64 | MUSTER | | RTVAVTKSQFLINGKPFYFHGVNKHEDADIRGKGFDWPLLVKDFNLLRWLGANAFRTSHYPYAEEVMQMCDRYGIVVIDECPGVGLALPQFFNNVSLHHHMQVMEEVVRRDKNHPAVVMWS-VANPASHLESAGYYLKMVIAHTKSLDPSRPVTFVSNSNYAADKGAPYVDVICLNSYYSWYHDYGHLELIQLQLATQFENWYKKYQKPIIQSEYGAETIAGFHQDPPLMFTEEYQKSLLEQYHLGLDQKRRKYVVGELIWNFADFMTEQSPTRVLGNKKGIFTRQRQPKSAAFLLRERYWKIANE------------------- |
6 | 6legA | 0.49 | 0.47 | 13.58 | 1.06 | HHsearch | | RSVAVKGEQFLINHKPFYFTGFGRHEDADLRGKGFDNVLMVHDHALMDWIGANSYRTSHYPYAEEMLDWADEHGIVVIDETAAVGFNLSLYVNGETQQAHLQAIKELIARDKNHPSVVMWSIANEPDTRPQGAREYFAPLAEATRKLDPTRPITCVNVMFAHTDTISDLFDVLCLNRYYGWYVQSGDLETAEKVLEKELLAWQEKLHQPIIITEYGVDTLAGLHSMYTDMWSEEYQCAWLDMYHRVFDRV--SAVVGEQVWNFADFATSQGILRVGGNKKGIFTRDRKPKSAAFLLQKRWTGMNFGEKPQ-QGG----------- |
7 | 6xxwA2 | 0.56 | 0.53 | 15.32 | 3.07 | FFAS-3D | | RTVRVEGKQFLINEKPFYFKGFGKHEDSDIRGKGLDQVINIKDFNLLKWIGANSFRTSHYPYSEEILFLADQYGIAVIEEAPAVGLNLWNRVDGKTLEHHLEIMRELIARDKNHPSVIMWSVANEAATYEDGAEEYFRRVIEETRRLDPTRPITIVENTKASETKVSKYVDVICVNRYYSWYTDSGDLSVIEYQLERDLREWYELYRKPIILSEFGADAISGFHSDPPLMFTEEYQQEMIKRFVGVL--DRLDFVVGEHIWNFADFMTKQSITRVVGNKKGVFTRNRQPKMVAHFLKERWSKLPDFWEK---------------- |
8 | 6legA2 | 0.49 | 0.47 | 13.58 | 0.78 | EigenThreader | | RSVAVKGEQFLINHKPFYFTGFGRHEDADLRGKGFDNVLMVHDHALMDWIGANSYRTSHYPYAEEMLDWADEHGIVVIDETAAVGFNLSEAVNGETQQAHLQAIKELIARDKNHPSVVMWSIANEPDTRPQGAREYFAPLAEATRKLDPTRPITCVNVCDAHTDTISDLFDVLCLNRYYGWYVQSGDLETAEKVLEKELLAWQEKLHQPIIITEYGVDTLAGLHSMYTDMWSEEYQCAWLDMYHRVFDR--VSAVVGEQVWNFADFATSQGILRVGGNKKGIFTRDRKPKSAAFLLQKRWTGM----NFGEKP--------QQGG |
9 | 1bhgA | 1.00 | 0.94 | 26.36 | 2.73 | CNFpred | | RTVAVTKSQFLINGKPFYFHGVNKHEDADIRGKGFDWPLLVKDFNLLRWLGANAFRTSHYPYAEEVMQMCDRYGIVVIDECPGVGLALPQFFNNVSLHHHMQVMEEVVRRDKNHPAVVMWSVANEPASHLESAGYYLKMVIAHTKSLDPSRPVTFVSNSNYAADKGAPYVDVICLNSYYSWYHDYGHLELIQLQLATQFENWYKKYQKPIIQSEYGAETIAGFHQDPPLMFTEEYQKSLLEQYHLGLDQKRRKYVVGELIWNFADFMTEQSPTRVLGNKKGIFTRQRQPKSAAFLLRERYWKIANE------------------- |
10 | 6xxwA | 0.55 | 0.52 | 14.90 | 1.50 | DEthreader | | RTVRVEGKQFLINEKPFYFKGFGKHEDSDIRGKGLDQVINIKDFNLLKWIGANSFRTSHYPYSEEILFLADQYGIAVIEEAPAVGLNLVTRVDGKTLEHHLEIMRELIARDKNHPSVIMWSVANEAATYEDGAEEYFRRVIEETRRLDPTRPITIVENTKASETKVSKYVDVICVNRYYSWYTDSGDLSVIEYQLERDLREWYELYRKPIILSEFGADAISGFHSDPPLMFTEEYQQEMIKRFVGVLDRL--DFVVGEHIWNFADF-MTKQSIRVVGNKKGVFTRNRQPKMVAHFLKERWSKLPDFWEK---------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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