>P08183 (134 residues) SLIRKRSTRRSVRGSQAQDRKLSTKEALDESIPPVSFWRIMKLNLTEWPYFVVGVFCAII NGGLQPAFAIIFSKIIGVFTRIDDPETKRQNSNLFSLLFLALGIISFITFFLQGFTFGKA GEGLMPNTLEGNVT |
Sequence |
20 40 60 80 100 120 | | | | | | SLIRKRSTRRSVRGSQAQDRKLSTKEALDESIPPVSFWRIMKLNLTEWPYFVVGVFCAIINGGLQPAFAIIFSKIIGVFTRIDDPETKRQNSNLFSLLFLALGIISFITFFLQGFTFGKAGEGLMPNTLEGNVT |
Prediction | CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC |
Confidence | 97534566655554222222212444431256887699999980114699999999999998888999999999999960899999999888899999999999999999999999999999999999999739 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 | | | | | | SLIRKRSTRRSVRGSQAQDRKLSTKEALDESIPPVSFWRIMKLNLTEWPYFVVGVFCAIINGGLQPAFAIIFSKIIGVFTRIDDPETKRQNSNLFSLLFLALGIISFITFFLQGFTFGKAGEGLMPNTLEGNVT |
Prediction | 75454534544455565675646666456674442201201210353131002103200221133112012313113103436446313640311012113213202323332332113002300330164448 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SLIRKRSTRRSVRGSQAQDRKLSTKEALDESIPPVSFWRIMKLNLTEWPYFVVGVFCAIINGGLQPAFAIIFSKIIGVFTRIDDPETKRQNSNLFSLLFLALGIISFITFFLQGFTFGKAGEGLMPNTLEGNVT | |||||||||||||||||||
1 | 4ry2A | 0.06 | 0.05 | 2.28 | 1.17 | DEthreader | ----SKEDLL-LAAVIYVADPGK-------YT-QNMMVKFAGFLKPLKKTVLCIFLASLLYTALGIAGSFYIKFLFDDLIKFE----KLNDLHIISAGFAVIFLLQIFLNYYRSILVTKLGMSIDKSIMMEYYS | |||||||||||||
2 | 4f4cA4 | 0.17 | 0.17 | 5.62 | 1.22 | SPARKS-K | YIGVGWVHDGSLERIGKDALSRLKQELEENNAQKTNLFEILYHARPHALSLFIGMSTATIGGFIYPTYSVFFTSFMNVFAGNPAD--FLSQGHFWALMFLVLAAAQGICSFLMTFFMGIASESLTRDLRNKLFR | |||||||||||||
3 | 3jacA | 0.11 | 0.07 | 2.70 | 0.92 | MapAlign | ------------------------------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
4 | 3jacA | 0.11 | 0.07 | 2.70 | 0.77 | CEthreader | ------------------------------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
5 | 4f4cA4 | 0.18 | 0.17 | 5.59 | 1.08 | MUSTER | VGW----HDGSLERIGKDALSRLKQELEENNAQKTNLFEILYHARPHALSLFIGMSTATIGGFIYPTYSVFFTSFMNVFAGNPA--DFLSQGHFWALMFLVLAAAQGICSFLMTFFMGIASESLTRDLRNKLFR | |||||||||||||
6 | 2yl4A | 0.11 | 0.08 | 2.97 | 1.70 | HHsearch | --------------------------------GLPEARKLLGLAYPERRRLAAAVGFLTMSSVISMSAPFFLGKIIDVIYTNPTVD-YSDNLTRLCLGLSAVFLCGAAANAIRVYLMQTSGQRIVNRLRTSLFS | |||||||||||||
7 | 3wmeA1 | 0.26 | 0.19 | 5.75 | 1.22 | FFAS-3D | -----------------------------------TARRIFALAWSSATMIVIGFIASILEGATLPAFAIVFGRMFQVF--TKSKSQIEGETWKYSVGFVGIGVFEFIVAGSRTALFGIASERLARDLRVAAF- | |||||||||||||
8 | 2onjA1 | 0.04 | 0.04 | 2.01 | 0.65 | EigenThreader | VEQTKDFILTGLMNIWLDCITIIIALSIMFFLDVKLTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVSFAIEDNEAKNFDKKNTNFLTRALKHTRWNAYSFAAINTVTDIGPIIVIGVGAY | |||||||||||||
9 | 5kpiA | 0.75 | 0.57 | 16.28 | 0.92 | CNFpred | --------------------------------PPASFWRILKLNSTEWPYFVVGIFCAIINGGLQPAFSVIFSKVVGVFTNGGPPETQRQNSNLFSLLFLILGIISFITFFLQGFTFGKAGEILTKRLRYMVFK | |||||||||||||
10 | 4ry2A1 | 0.06 | 0.05 | 2.28 | 1.17 | DEthreader | ----SKEDLL-LAAVIYVADPGK-------YT-QNMMVKFAGFLKPLKKTVLCIFLASLLYTALGIAGSFYIKFLFDDLIKFE----KLNDLHIISAGFAVIFLLQIFLNYYRSILVTKLGMSIDKSIMMEYYS | |||||||||||||
|
|
Top 10 structural analogs in PDB (as identified by
TM-align)
|
|
Top 5 enzyme homologs in PDB
|
Template proteins with similar binding site:
|
References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |