Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC MSQQHTLPVTLSPALSQELLKTVPPPVNTHQEQMKQPTPLPPPCQKVPVELPVEVPSKQEEKHMTAVKGLPEQECEQQQKEPQEQELQQQHWEQHEEYQKAENPEQQLKQEKTQRDQQLNKQLEEEKKLLDQQLDQELVKRDEQLGMKKEQLLELPEQQEGHLKHLEQQEGQLKHPEQQEGQLELPEQQEGQLELPEQQEGQLELPEQQEGQLELPEQQEGQLELPEQQEGQLELPQQQEGQLELSEQQEGQLELSEQQEGQLKHLEHQEGQLEVPEEQMGQLKYLEQQEGQLKHLDQQEKQPELPEQQMGQLKHLEQQEGQPKHLEQQEGQLEQLEEQEGQLKHLEQQEGQLEHLEHQEGQLGLPEQQVLQLKQLEKQQGQPKHLEEEEGQLKHLVQQEGQLKHLVQQEGQLEQQERQVEHLEQQVGQLKHLEEQEGQLKHLEQQQGQLEVPEQQVGQPKNLEQEEKQLELPEQQEGQVKHLEKQEAQLELPEQQVGQPKHLEQQEKHLEHPEQQDGQLKHLEQQEGQLKDLEQQKGQLEQPVFAPAPGQVQDIQPALPTKGEVLLPVEHQQQKQEVQWPPKHK |
1 | 7kogB | 0.14 | 0.11 | 3.65 | 1.18 | FFAS-3D | | -----------------------------------------------------------------------EKKAKAIDKIIGEWKLKVDDLAAELDASQKECRNYSTELFRLKGAYEEAQEQLEAVRRENKNLADEVKDLLDQIGEGGRNIHEIEKQKKRLEVEKDELQAALEEAEAALEQ----EENKVLRSQLELSQVRQEIDRRIQEKEEEFENTRKNHQRALDSMQASLEAEAKGKAEALRMKKKLEADINELEIALDHANKANSEAQKTIKKYQQQLKDVQTAEEEQRARDDAREQLGISERRANALQNEESRTLLEQADRGRRQAEQELGDAHEQINELAAQATSASAAKRK------LEGELQTLHADLDEL-LNEAKNSEEKAKKAMVDAARLADELRAEQDHAQTQEKLRKALETQIKEKKAIAKLEQRVRELENELDGEQRRHADAQKNLRKSERRIKELSFQADEDRKNHERMQDLVDKLQQKIKTYKRQIEEAEEIAALNLAKFRKAQELEEAEERADLAEQAIAKFR-------------------------------------------- |
2 | 6yvuB | 0.10 | 0.10 | 3.76 | 1.95 | SPARKS-K | | LTLLRSKLFQFKLLQSNSKLASTLEKISSSNKDLEDEKMKFQESLKKVDEIKAQRKEKDRISSCSSKEKTLVLERRELEGTRVSLEERTKNLVSKMEKAEKTLKSTKHSISEAENMLEELRGQQTEHETEIKDLTQLLEKERSILDDIKLSLKDKTKNISAEIIRHEKELEPWD-LQLQEKESQIQLAESELSLLEETQAKLKTLEEKILAKKTHKQELQDLILDLKKKLNSLKRSQGEKNFTSAHLKLKEMQKVLNAHRQRAMEARSSLSKAQNKSKVLTALSRLQKSQHCIDYLRKNLQPISTPSERENNFRVASDTVHEMEEPDLESQISKAEMEADSLASELTLAEQQVKEAEMAYVKAVSDKAQLNVVMKNLERLRGYNDLQSETKTKKEKIKGLQDEIMLQMQNSKVESVCQKLDILVAKLKKVKSASKKSGGDVVKFQKLLQSERDVELSSDELKVIEEQLKHTKLALAENDTNMNETLNLKVELKEQSEQLKEQMEDMEESINEFKSIEIEMKNKLEKLNSLLTYIKSEITQQEKGL----ESEIKDAETSCLSEDELRELDVELIESKINELSYYV |
3 | 6ajfA | 0.04 | 0.04 | 2.01 | 1.05 | MapAlign | | WWGRTVYQFRYIVIGVMVALCLGGGVYGISLGNHVTQSGFYDEGSQSVAASLIGDEVYGRDRTSHVVAILTPPDDKKVTDKAWQKKVTEELDQVVKDPLQGDDDDEILKNYQVVELNPLASELTGTIGEDQKRAIPLVAVVLFFVFGTVIAAALPAIIGGLAIAGALGIMRLV-------------AEFTPVHFFAQPVVTLIG------------LGIAIDYGLFIVSRFREEIAEGYDTEAAVRRTVMTSGRTVVFSAVIIVASSVPLLLFPQGFLKSITYAIIASVALAILGPRVDNVVMKRPIAFAAPILVVMVLNAVRQSQEQFDKLEQDSIHSLFDKLPLMALILIVTTTVLMFLAFGSVVLPIKAALMSALTLQPLMAPMIGLIIAVIWGLSTDYEVFLVSRMVEARERSTAEAIRIGTATTGRLITGAALILAVVAGAFVFSDLVMMKYLAFGLLIALLLDATIIRMFLVPAVMKLLGDDIGHLLTKSPSLNAAKSELDKAIITKDEAEKLFNQDVDAAVRGQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYAKRVITTFRTGTWDAY---- |
4 | 6rd41 | 0.13 | 0.12 | 4.23 | 1.01 | MUSTER | | FTEEITAPKVASKQATENLMKLLQAYKDIGDAKSEPLLKNHNPRTFEDRDYPVPDFRTQNLKAGDVPKDTVISTRASAAIASKDKFWAGRKTEAEAASAKASAAVPEWKKGKTVSIENLNTVTDKYAAALVPKRKLALPVLPEGVKKAVEASVGQAKNASEVSELLAKSLAEKAVVTEGGKVVEGFSYVSKAVAAKVIATRRAEVHERLLKLWAKRLLVSPELAIVPLNEFDAQLASKFEG---ISPKYQELLSAVAQGNKTFAQRLNSSPAFSSFLLKREKAESEVPPSELELEAAQKAAELEDPEVALRTLLGPQMEALGALLLSEQIRVITEHRYTPDRLQYKEGMKKIAAQEAALKEELKVIYGDNVDVKHFQASPRTPVQQLFDSLKNAAANKERAAKEAAAAASPYLAYAVTKKQEVQADPSNIPFDEVLYPQLSEELLELELSDIREDEIALEKAEEEELWLLTLTQQFKHIQKH-----FGIDLPHSVVAHMDPLLIKKIDW-ETTNALEDFDITLDDMGAEDAKEQWGAENLSHHFLP-----------------LIRYRRDLARKNGDRYGPDLV |
5 | 6hwhV | 0.05 | 0.05 | 2.17 | 0.57 | CEthreader | | --------------------------------------------LLARRPFPQRLGPRWTLLYKLVTTTDHKLIGMMYVVACFIFFFIGGLMALLLRTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVVPLQIGAPDVAFPRLNALSFWLFLFGASIALGGFLAPGGPADFGWTAYTPLSNAMHSPGAGGDLWIFGLIVGGLGTILGAVNMITTVVCMRAPGMIMFRMPIFTWNILVTSVIVLVAFPLLTSALFGLAADRNLGAHVFDPANGGTMLWEHLFWFFGHPEVYIIALPFFGIVTEIFPVFSRKPVFGYTTLVYATISIGALSIAVWAHHLYATGAVLLPFFSFMTFMIAVPTGIKFVNWIGTMWKGQLTFETPMLFSVGFLVTFLLGGLTGVIL-ASPPLDFHVTDSYFVVAHFHYVLFGTIVFATYAGVYFWFPKMTGRLLDDRLGKLHFWLTLIGFHTTFLVHHWLGAEGMPRRYADYLPTDGFTTLNIVSTIGSFILGVSMLPFVWNVFKSWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSERPAFELHYPHM |
6 | 5l4kN | 0.07 | 0.06 | 2.74 | 0.95 | EigenThreader | | MITSALLDEDEPQLKEFLHKLNAVVNDFWAEISESVDKIEVLYEDEGFRSRQFAALVASKVFYHLGAFEESLNYALGAGDLFTIIAKCIDHYTKQCVENADLDQRLEGIVNKMFQRCLDDAIGIALETDVFEKTILEPGMLAYSLKLCMSQFRNKVLRVLVKIINVCQCLIFLDDPQAVSDILEKICFDLYESASQQFLSSVIQNLRTVGTPTLKMI--KILSGEMAIELHLQFLIRNNNTDLMILKNTKDAVFLRDWLARALQLMATYLPKDTSAYQEGGGLYALGLIHIIDYLLNQLKNASNDIVRHGGSLGLGLAAMTARQDVYDLLKTNLYVTGEAAGLALGLVMQAIEDMVGYAQETQHEKILRGLAVGIALVMYEADALIESLCLRRSGMYTVAMAYAIRRRRAAVESLGFILLLSEHVRYGAAMALGICCEAINLLEPMTNDPVNYVRQG---ALIASALIMIQKVNQFRQLYSKVAKFGAILAQGIGGHNVMPSVVGVLVFTQFWVSTAVLSITAKAKKKEKEKEKKEEELLDNPARVMPAQLKVLTMPETCRYQPFKPLS---IILKDTSEDIEEL |
7 | 5xjcI | 0.10 | 0.08 | 3.14 | 1.18 | FFAS-3D | | --RSHPLPLKLSPESAEELKS-----SDRLDEAAQRLATV-----------------NDERFVSKAGKSNYHELCDLISQNPDKQSLNVDAIIRGGLTRFTQLGKLWCSLADYYISGHFEKARDVYEEAITVMTVRDFTQVFDSYEEMIAAKMETASEEEEDDVDLELRLARFELISRRPLLLNSVLLRQNHHVHEWHKRVALGRPREIINTYTEAVQPFKATGKPHTLWKFYEDNGQLDDARVIATKVNFKQVDDLASVWCCGELELRHENYDEALRLLRKPARRAEYFDGSEPVQNRVYKSLKWSMLADLEESLGTFQSYDRILDLRIATPQILEEHKYFEESFKAYESLFKWPRKLERARDLFLDGCPPKYAKTLYLLYAQLEEEWGLARHAMAVYERATRAVEPAQQYDMFNIYIAEIYGVTHTRGIYQHAREMCLRFADMECGEIDRARAIYSTWKDFEVRHGNEDTIKEMLRIRRSVQATSGMDDMKLLEQRLAAEAERDQPLRAQSKLFVRSDASREELAELAQQVNPEE------------------------------------------------ |
8 | 7kpxC | 0.06 | 0.06 | 2.61 | 1.87 | SPARKS-K | | LRNVMEYDVKFYEIFNFDQLVEITEQIKMRDITNLQLSKTPLSIKMVAEWYLSSVNRTVLLKIFKIFCIDLEIVYHQLLSDIESLEALMDILLCYQKLFSQFINDHILFTKTFIFIAYNVTSFMPFWKFFMKNFPFVLKVDNDLRIELQSVYNDEKLKTEKLKNDKSEVLKVYSMINNSNQAVGQTWNFPEVFQVNIRFLLHNSEIIDTNTSKQFQKARNNVMLLIATNLKEYNKFMSIFLKRKDFTNKNLIQLISLKLLTFEVTQNVLGLELPINLENNDGSYGLFLKYHKEQFIKSNFEKILLTCYELEKKYHGNECEINYYEILLKILITYGSSPKLLATSTKIIMLLLNDSVENSSNILVDEIDHVEYYVMMDKKIMENNEPAMAMEDLKNFIFQIIEITNDQLKDMQTIEMIVEKDFCTSCLQNNNQKIDDNYISGMIVISMENYHLLIKIIRQLSELNEGNLSKREIQHQDSIFQRIIADLSADKPTSPFIDSICKLFDKISFNLRLKLFLYEILSSLKSFAIYSSTIDAPAFHTS----GKVELPKKLLNLPPFQVSSFVKETSFSLNLGIGIVEIAH |
9 | 4ltbA | 0.11 | 0.03 | 1.16 | 0.51 | CNFpred | | --------------------------------------------------------------------------------------------------------------------------LSQASADLEATLRHKLTVMYSQINGASRALD-----------------------------------------DVRNRQQDVRMTANRKVEQLQQEYTEMKALLDASETTSTRKIKEEEK--------------------------------------------------------------------------------------------RVNSKFDTIYQILLKKKSEIQTLKEEIEQSLTKRDEFEFLE---------------------KASKLRGISTKPVYIPEVELNHKLIKGIHQSTIDLKNELKQCIGRLQE---------------------------------------------------------------------------------------------------------------------------------------------- |
10 | 6reyc | 0.07 | 0.04 | 1.75 | 0.67 | DEthreader | | ----------------------------------PVGSSQVLVPRF---------------------SISFNGRWLNKLMLLLIPVAAQQSCIGARIATFSFTILTQFAKCCPEESLKLFVP-------------------RDGRKLLLYREQLVKILQRTLHSCLLLR--------AFYLLDSFLQPELVKLQHCDKL--V----LKGENREVIATVIRKLLNHILD----SLFLIIKIIGD-----HEFDSRWKSFNLVKKSMENRLHGKKQH--------L--RV-L----------------------------VEG--------------------NKAQQTFFAAGGVCLANL---VRLFDDLAEKIHRQYETIGLLNYENLVDTLLDGVFEHIGIGL-----------DAIVVRKMAISAVAGILKQL-------------------REDMEAEQIIFDHFSDPKF---------------NFDDAFLPVK--WTFEK--------------DPRKL-----AQQEWRVPEL--L--E-T----R--IGSVLTYIFVFTRILEKLTQGIKLKTKW-A- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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