>P07437 (122 residues) DLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMMAACDPRHG RYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFI GN |
Sequence |
20 40 60 80 100 120 | | | | | | DLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGN |
Prediction | CHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCSSCCCCCCCHSHSSHHHSSCCCCHHHHHHHHHHHHHHCCCCSSSSCCCCSSSSSSCCCCCCCCSSSSSSCC |
Confidence | 94676453688887420222223212320012125777999998753413212127999721101110107888288999999988745874155378876987517899987757998529 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 | | | | | | DLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGN |
Prediction | 83441332101234121323123313343433244343442343224442331423354332120011011313343145124304444223114123532421314332462421000128 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCSSCCCCCCCHSHSSHHHSSCCCCHHHHHHHHHHHHHHCCCCSSSSCCCCSSSSSSCCCCCCCCSSSSSSCC DLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGN | |||||||||||||||||||
1 | 6gj4B | 0.82 | 0.81 | 22.90 | 1.33 | DEthreader | GVTLALRKLAVVPRLHFFMPGFAPLTSGSQQYR-ALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGN | |||||||||||||
2 | 1tubA2 | 0.34 | 0.34 | 10.07 | 2.27 | SPARKS-K | DLTEFQTNLVPYPRGHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYEPPTVVQRAVCMLSN | |||||||||||||
3 | 6kppB | 0.96 | 0.95 | 26.66 | 1.18 | MapAlign | -LRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGN | |||||||||||||
4 | 6kppB | 0.96 | 0.96 | 26.89 | 1.11 | CEthreader | DLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGN | |||||||||||||
5 | 3hkeD | 0.97 | 0.97 | 27.11 | 2.56 | MUSTER | DLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGN | |||||||||||||
6 | 1tubA2 | 0.34 | 0.34 | 10.07 | 2.88 | HHsearch | DLTEFQTNLVPYPRGHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYEPPTVVQRAVCMLSN | |||||||||||||
7 | 1tubA2 | 0.34 | 0.34 | 10.07 | 1.79 | FFAS-3D | DLTEFQTNLVPYPRGHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYEPPTVVQRAVCMLSN | |||||||||||||
8 | 6gj4B2 | 0.96 | 0.96 | 26.89 | 1.47 | EigenThreader | DLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGN | |||||||||||||
9 | 5ij9B | 0.93 | 0.93 | 26.01 | 2.56 | CNFpred | DLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMSSTFIGN | |||||||||||||
10 | 6gj4B2 | 0.82 | 0.81 | 22.90 | 1.33 | DEthreader | GVTLALRKLAVVPRLHFFMPGFAPLTSGSQQYR-ALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGN | |||||||||||||
|
|
Top 10 structural analogs in PDB (as identified by
TM-align)
|
|
Top 5 enzyme homologs in PDB
|
Template proteins with similar binding site:
|
References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |