Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360
| | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCHHHHHHHHSSCCCCCCCSSSSSCCCCCCHHHHHHCHHHHHHHCCHHHHHHHHCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHCHHHHHHHHHHHHHHCCCCCSSSSSCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCSSCCCCCCSSSSCCCCCCHHHHHHHHHCCCCCCCSSSSSSCCCCCCCCCCCCHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCSSSSSSSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCC MAALTRDPQFQKLQQWYREHRSELNLRRLFDANKDRFNHFSLTLNTNHGHILVDYSKNLVTEDVMRMLVDLAKSRGVEAARERMFNGEKINYTEGRAFDNFEQLLSGAHWMDQHFRTTPLEKNAPVLLALLGIWYINCFGCETHAMLPYDQYLHRFAAYFQQGDMESNGKYITKSGTRVDHQTGPIVWGEPGTNGQHAFYQLIHQGTKMIPCDFLIPVQTQHPIRKGLHHKILLANFLAQTEALMRGKSTEEARKELQAAGKSPEDLERLLPHKVFEGNRPTNSIVFTKLTPFMLGALVAMYEHKIFVQGIIWDINSFDQWGVELGKQLAKKIEPELDGSAQVTSHDASTNGLINFIKQQREARVQ |
1 | 1gzdA1 | 0.87 | 0.74 | 20.85 | 1.17 | DEthreader | | -AALTQNPQFKKLQTWYHEHRSDLNLRRLFEGDKDRFNHFSLNLNTNHGRILLDYSKNLVTEAVMQMLVDLAKSRGVEAARERMFNGAVLVGGSLIGIANFEQLLSGAHWMDQHFRTTPLEKNAPVLLALLGIWYINFFGCETHAMLPYDQYLHRFAAYFQQGDMESNGKYITKSGTRVDHQTGPIVWGEPGTNGQHAFYQLIHQGTKMIPCDFLIPVQTQHPIRKGLHHKILLANFLAQTEALMKGKSTEEARKELQAAKDFEKLLP-HK--VF-EGNRPTNSIVFTKLTPFILGALIAMYEHKIFVQGVIWDINSF------------------------------------------------ |
2 | 3hjbA3 | 0.57 | 0.49 | 14.06 | 2.74 | SPARKS-K | | NINPTQTQAWKALTAHFESAQD-MDLKALFAQDSERFAKYSARFG---QDILVDYSKNLVNAETMQHLFALAKETDLQSAITAMFKGEAINQTEDRAYDNFVELLAGAHEMDQHFVNTPFESNIPVILALIGIWYNNFHGAESEAILPYDQYLHRFAAYFQQGNMESNGKYVDRNGNPVTYQTGPIIWGEPGTNGQHAFYQLIHQGTKLIPCDFIAPAVSHN--LVGDHHQKLMSNFFAQTEALAFGKSAQAVQAELEKAGKSAAEIAALVPFKVFEGNRPTNSILVKQITPRTLGNLIAMYEHKIFVQGVIWNIFSFD----------------------------------------------- |
3 | 2o2dB | 0.51 | 0.50 | 14.40 | 1.50 | MapAlign | | -ADLTSCASWTQLQKLYEQY-GDEPIKKHFETDSERGQRYSVKVSLGENFLFLDYSKSHINDEIKCALLRLAEERGIRQFVQSVFRGERVPIMISIGYENFVELLTGAHVIDEHFANAPPEQNVPLLLALVGVWYINFFGAVTHAILPYDQYLWRLPAYLQQLDMESNGKYVTRSGKTVSTLTGPIIFGEAGTNGQHAFYQLIHQGTNLIPCDFIGAIQSQ--NKIGDHHKIFMSNFFAQTEALMIGKSPSEVRRELEAAGESAEKINALLPHKTFIGGRPSNTLLIKSLTPRALGAIIAMYEHKVLVQGAIWGIDSYDQWGVELGKVLAKSILPQLRPGMRVNNHDSSTNGLINMFNELS----- |
4 | 2o2dB | 0.52 | 0.51 | 14.70 | 1.02 | CEthreader | | DTTLTSCASWTQLQKLYEQY-GDEPIKKHFETDSERGQRYSVKVSLGENFLFLDYSKSHINDEIKCALLRLAEERGIRQFVQSVFRGERVNTTENRPYENFVELLTGAHVIDEHFANAPPEQNVPLLLALVGVWYINFFGAVTHAILPYDQYLWRLPAYLQQLDMESNGKYVTRSGKTVSTLTGPIIFGEAGTNGQHAFYQLIHQGTNLIPCDFIGAIQSQNKI--GDHHKIFMSNFFAQTEALMIGKSPSEVRRELEAAGESAEKINALLPHKTFIGGRPSNTLLIKSLTPRALGAIIAMYEHKVLVQGAIWGIDSYDQWGVELGKVLAKSILPQLRPGMRVNNHDSSTNGLINMFNELSH---- |
5 | 3hjbA3 | 0.57 | 0.49 | 13.99 | 2.35 | MUSTER | | NINPTQTQAWKALTAHFESAQD-MDLKALFAQDSERFAKYSARF---GQDILVDYSKNLVNAETMQHLFALAKETDLQSAITAMFKGEAINQTEDRAYDNFVELLAGAHEMDQHFVNTPFESNIPVILALIGIWYNNFHGAESEAILPYDQYLHRFAAYFQQGNMESNGKYVDRNGNPVTYQTGPIIWGEPGTNGQHAFYQLIHQGTKLIPCDFIAPAVSHNLVG--DHHQKLMSNFFAQTEALAFGKSAQAVQAELEKAGKSAAEIAALVPFKVFEGNRPTNSILVKQITPRTLGNLIAMYEHKIFVQGVIWNIFSFD----------------------------------------------- |
6 | 4em6D2 | 0.47 | 0.46 | 13.29 | 3.05 | HHsearch | | RDATKLEATVAKLKKHWAESA-PRDMRAAFSADPGRFGRYSLCLD----DLLFDWSKCRVNDETMALLKELAVAADVEGRRAAMFAGEHINNTEDRAWDDFRKFLAGAHAMDVHFRDAPLEKNLPVMLGLIGYWHRAICGYGSRAIIPYDQRLSRLPAYLQQLDMESNGKSVTLDGKPVSGPTGPVVWGEPGTNGQHAFFQLLHQGTDTIPLEFIVAAKGHEPTLD-HQHEMLMANCLAQSEALMKGRTLDEARAQLQAKNLPASQVERIAPHRVFSGNRPSLTLIHDMLDPYTLGRLIALYEHRVFVEAQIFGINAFDQWGVELGKELATELLPVVSGKEGASGRDASTQGLVAHLHARRK---- |
7 | 4em6D2 | 0.45 | 0.43 | 12.63 | 4.00 | FFAS-3D | | -RDATKLATVAKLKKHWAE-SAPRDMRAAFSADPGRFGRYSLCL----DDLLFDWSKCRVNDETMALLKELAVAADVEGGRYSVWSAIGLPVMIAVGPDNFRKFLAGAHAMDVHFRDAPLEKNLPVMLGLIGYWHRAICGYGSRAIIPYDQRLSRLPAYLQQLDMESNGKSVTLDGKPVSGPTGPVVWGEPGTNGQHAFFQLLHQGTDTIPLEFIVAAKGHEPTLDH-QHEMLMANCLAQSEALMKGRTLDEARAQLQAKNLPASQVERIAPHRVFSGNRPSLTLIHDMLDPYTLGRLIALYEHRVFVEAQIFGINAFDQWGVELGKELATELLPVVSGKEGASGRDASTQGLVAHLHARRK---- |
8 | 3hjbA3 | 0.57 | 0.49 | 13.99 | 1.83 | EigenThreader | | NINPTQTQAWKALTAHFESAQ-DMDLKALFAQDSERFAKYSARFGQ---DILVDYSKNLVNAETMQHLFALAKETDLQSAITAMFKGEAINQTEDRAVDNFVELLAGAHEMDQHFVNTPFESNIPVILALIGIWYNNFHGAESEAILPYDQYLHRFAAYFQQGNMESNGKYVDRNGNPVTYQTGPIIWGEPGTNGQHAFYQLIHQGTKLIPCDFIAPAVSHNLVGD--HHQKLMSNFFAQTEALAFGKSAQAVQAELEKAGKSAAEIAALVPFKVFEGNRPTNSILVKQITPRTLGNLIAMYEHKIFVQGVIWNIFSFD----------------------------------------------- |
9 | 2cvpA | 0.71 | 0.68 | 19.41 | 2.33 | CNFpred | | --------GPLMVTEALKPYSPRVWFVSN--IDGTHIAKTLASLS-PETSLFIIASKTFTTQETITNAETAKEWFLEAAKDPSAVAKHFVALSTN-GFDHFEQLLSGAHWMDQHFLKTPLEKNAPVLLALLGIWYINCYGCETHALLPYDQYMHRFAAYFQQGDMESNGKYITKSGARVDHQTGPIVWGEPGTNGQHAFYQLIHQGTKMIPCDFLIPVQTQHPIRKGLHHKILLANFLAQTEALMKGKLPEEARKELQAAGKSPEDLEKLLPHKVFEGNRPTNSIVFTKLTPFILGALIAMYEHKIFVQGIMWDINSFDQWGVELGKQLAKKIEPELEGSSAVTSHDSSTNGLISFIKQQRDTKL- |
10 | 1gzdA | 0.87 | 0.74 | 20.85 | 1.17 | DEthreader | | -AALTQNPQFKKLQTWYHEHRSDLNLRRLFEGDKDRFNHFSLNLNTNHGRILLDYSKNLVTEAVMQMLVDLAKSRGVEAARERMFNGAVLVGGSLIGIANFEQLLSGAHWMDQHFRTTPLEKNAPVLLALLGIWYINFFGCETHAMLPYDQYLHRFAAYFQQGDMESNGKYITKSGTRVDHQTGPIVWGEPGTNGQHAFYQLIHQGTKMIPCDFLIPVQTQHPIRKGLHHKILLANFLAQTEALMKGKSTEEARKELQAAKDFEKLLP-HK--VF-EGNRPTNSIVFTKLTPFILGALIAMYEHKIFVQGVIWDINSF------------------------------------------------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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