>P04211 (117 residues) MAWTPLFLFLLTCCPGSNSQTVVTQEPSLTVSPGGTVTLTCASSTGAVTSGYYPNWFQQK PGQAPRALIYSTSNKHSWTPARFSGSLLGGKAALTLSGVQPEDEAEYYCLLYYGGAQ |
Sequence |
20 40 60 80 100 | | | | | MAWTPLFLFLLTCCPGSNSQTVVTQEPSLTVSPGGTVTLTCASSTGAVTSGYYPNWFQQKPGQAPRALIYSTSNKHSWTPARFSGSLLGGKAALTLSGVQPEDEAEYYCLLYYGGAQ |
Prediction | CCCHHHHHHHHHHHCCCCCCSCSCCCCCSCCCCCCCSSSSSCCCCCCCCCCCCSSSSCCCCCCCCSSSSSCCCCCCCCCCCCCCCCCCCCSSSSSSCCCCHHHCSSSSSSSSCCCCC |
Confidence | 971689999999815631210113596403499931999972577887898605776259999987999758965899997752578898056764589922441232322148999 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 | | | | | MAWTPLFLFLLTCCPGSNSQTVVTQEPSLTVSPGGTVTLTCASSTGAVTSGYYPNWFQQKPGQAPRALIYSTSNKHSWTPARFSGSLLGGKAALTLSGVQPEDEAEYYCLLYYGGAQ |
Prediction | 733221323322322223013332033324434433030304133343234420142113444322100142463333325221225343413020343345130201002125668 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 | | | | | | |||||||||||||
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SS Seq | CCCHHHHHHHHHHHCCCCCCSCSCCCCCSCCCCCCCSSSSSCCCCCCCCCCCCSSSSCCCCCCCCSSSSSCCCCCCCCCCCCCCCCCCCCSSSSSSCCCCHHHCSSSSSSSSCCCCC MAWTPLFLFLLTCCPGSNSQTVVTQEPSLTVSPGGTVTLTCASSTGAVTSGYYPNWFQQKPGQAPRALIYSTSNKHSWTPARFSGSLLGGKAALTLSGVQPEDEAEYYCLLYYGGAQ | |||||||||||||||||||
1 | 5c6wJ | 0.38 | 0.35 | 10.38 | 1.33 | DEthreader | ----PG--QG--LEWMGAQQSALTQPASVSASPGQSITISCTG-TSSDGAYDWVSWYQQHPGKAPKLLIFDVNNRPSGVSHRFSGSKSGNTASLTISGLQAEDEADYYCASATLLDT | |||||||||||||
2 | 6mtsL1 | 0.80 | 0.67 | 18.84 | 1.10 | SPARKS-K | -------------------QTVVTQEPSLTVSPGGTVTLTCASSAGAVTSDFSPNWFLQKPGQVPRSLIYNTDKRHSWTPARFSGSLIGGKAALTLSGAQPDDEGDYYCLVHYRGAW | |||||||||||||
3 | 6vyvM1 | 0.58 | 0.48 | 13.75 | 0.63 | MapAlign | --------------------AVVTQESALTTSPGETVTLTCRSNIGAVTSSNCANWVQEKPDHFFTGLIGDTNNRRSGVPARFSGSLIGDKAALTITGAQTEDEAIYFCALWYNNLW | |||||||||||||
4 | 6vyvM1 | 0.58 | 0.49 | 13.99 | 0.36 | CEthreader | -------------------QAVVTQESALTTSPGETVTLTCRSNIGAVTSSNCANWVQEKPDHFFTGLIGDTNNRRSGVPARFSGSLIGDKAALTITGAQTEDEAIYFCALWYNNLW | |||||||||||||
5 | 5c6wJ2 | 0.41 | 0.34 | 10.07 | 1.12 | MUSTER | -------------------QSALTQPASVSASPGQSITISCTGTSSDVGAYDWVSWYQQHPGKAPKLLIFDVNNRPSGVSHRFSGSKSGNTASLTISGLQAEDEADYYCASATLLDT | |||||||||||||
6 | 6wznA | 0.41 | 0.35 | 10.31 | 0.36 | HHsearch | ---------------GAHADIQMQSPSFLSASVGDRVTITCRASQGI---SSWLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQANSFPL | |||||||||||||
7 | 5c6wJ2 | 0.41 | 0.34 | 10.07 | 1.69 | FFAS-3D | -------------------QSALTQPASVSASPGQSITISCTGTSSDVGAYDWVSWYQQHPGKAPKLLIFDVNNRPSGVSHRFSGSKSGNTASLTISGLQAEDEADYYCASATLLDT | |||||||||||||
8 | 2kh2B2 | 0.28 | 0.25 | 7.58 | 0.32 | EigenThreader | GSG-----------GGGSEVQLVESGGGL-VQPGGSLRLSCAASG-FDFSRYDMSWVRQAPGKRLEWVAYISSYFPDTVKGRFTISRDNNTLYLQMNSLRAEDTAVYYCARQNKKLT | |||||||||||||
9 | 4k3gA | 0.77 | 0.63 | 17.90 | 1.69 | CNFpred | ---------------------VVTQEPSVTVSPGGTVILTCGSSTGAVTSGHYANWFQQKPGQAPRALIFETDKKYSWTPGRFSGSLLGAKAALTISDAQPEDEAEYYCSLSDVDGY | |||||||||||||
10 | 2gjjA | 0.19 | 0.18 | 5.77 | 1.33 | DEthreader | ----PG--QS--PKLLKSGEVQLQQSGPEVVKTGASVKISCKASGYSF-TGYFINWVKKNSGKSPEWIGHISTSTYQKFKNKAAFTVDTSTAFMQLNSLTSEDSADYYCVRSGNYEY | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |