Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| SS Seq | CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHC MPRLFFFHLLGVCLLLNQFSRAVADSWMEEVIKLCGRELVRAQIAICGMSTWSKRSLSQEDAPQTPRPVAEIVPSFINKDTETINMMSEFVANLPQELKLTLSEMQPALPQLQQHVPVLKDSSLLFEEFKKLIRNRQSEAADSSPSELKYLGLDTHSRKKRQLYSALANKCCHVGCTKRSLARFC |
1 | 6lewA1 | 0.12 | 0.12 | 4.35 | 0.49 | CEthreader | | -GARALEALLTVAGELRGPPLQLDTGQLLKIAKRGGVTAVEAVHAWRNALTGAPLNASHDGGKQALETVQRLLPVLCQAHGLTPQQVVAIASHDGGKQALETVQRLLPTPEQVVAIASHDGGKQALETVQALLPVLCQAHGLTPEQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPQQVVAIA |
2 | 4kppA | 0.11 | 0.10 | 3.74 | 0.45 | EigenThreader | | TKEKFQLLAISSLTLPWLISLAFNYHHPALTQTLLSGLAVVPEYAVDGYFAWKAGSVGGEYVHY-----ATANMTGANRLLIGIGWSLVAFIAFRTLKSKEVELDDG-IRLEIFFLFLATLYAFTLPLK-GYIYLSTKAEVGGVPAYLCSLKSVVVLFLFAGFTILMSVEAFSEGLLETAAPLAS |
3 | 2kqpA | 0.21 | 0.09 | 2.92 | 0.62 | FFAS-3D | | --------------------------------HLCGSDLVEALYLVCGERGFFYTKPTRREAEDLQVGQVELGGGPGAGSLQP-------------------------------------------LALEGS-------------------------LQKR----GIVEQCCTSICSLYQLENYC |
4 | 7abhu | 0.05 | 0.05 | 2.25 | 0.73 | SPARKS-K | | SWQARHTGIKIVQQIAILVEIIEHGLVDEQ------QKVRTISALAIAALAEAATPYGIESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDA-----EYANYYTREVMLILIRFQSPDEEMKKIVLKVVKQCCGTDGVEANYIKTEILPHFWQHRMALDRRNYRQLVDTTVELANKVGAA |
5 | 3ll4A | 0.09 | 0.02 | 0.84 | 0.53 | CNFpred | | TQQIGLRLSRAIARIQNLHRKHQSEGRASDIMVFAHGHALRYFAAIW------------------------------------------------------------------------------------------------------------------------------------------ |
6 | 6h02A | 0.06 | 0.05 | 2.10 | 0.83 | DEthreader | | -------GQHSPRISYLALTFKLRAEVIAYIERNCPAYVDTFRALPYDKDLFEQLLVDMVNM-----------ACPMGALVETIY-GNGIM-------R--IPLPGMHKYEGNVCLRFLPVFDIIPTYLYNTLHYELPEPYWIVLHDRIVSVISSLTVTFQLLYLLNYMDPCA------------ |
7 | 3nm8A | 0.03 | 0.03 | 1.73 | 0.82 | MapAlign | | DTEKRDFVRTVLILKEKAGKFHTPPGSDRNAAHMSSAFLPWHREYLLRFERDLQSINPEVTLPYWEWETDSQSQIWSADFMGGNGNPIKDFIVDTGPFAAGRWTTIDEQGNPSGGLKRNFGALPTRDDVLNALKITQYDTPPWDMTSQNSFRNQLEGFINGPQLHNRVHRWVGGQMVFFLHHANV |
8 | 2kqpA | 0.22 | 0.10 | 3.23 | 0.52 | MUSTER | | ----------------------FVNQ------HLCGSDLVEALYLVCGE--------------------------------RGFFYTKPTRREAEDLQVGQVELGGG------------------------------PGAGSLQPLALEG------SLQKR----GIVEQCCTSICSLYQLENYC |
9 | 2k6tB | 0.39 | 0.06 | 1.92 | 2.40 | HHsearch | | -------------------------PTPEMREKLCGHHFVRALVRVCGGPRWSTEA--------------------------------------------------------------------------------------------------------------------------------- |
10 | 3nm8A | 0.05 | 0.05 | 2.45 | 0.49 | CEthreader | | IYDRYIAWHGAAGKFHTPPGSDRNAAHMSSAFLPWHREYLLRFERDLQSINWEWETDAQMQDPSQSQIWSADFMGGNGNPIKDFIVDTGPFAAGRWTTIDEQGNPSGGLKRNFG-ATKEAPTLPTRDDVLNALKITQYDTPPWDMTSQNSFRNQLEGFINGPQLHNRVHRWVGGQMGVVPTAPND |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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