>P04066 (372 residues) MRAPGMRSRPAGPALLLLLLFLGAAESVRRAQPPRRYTPDWPSLDSRPLPAWFDEAKFGV FIHWGVFSVPAWGSEWFWWHWQGEGRPQYQRFMRDNYPPGFSYADFGPQFTARFFHPEEW ADLFQAAGAKYVVLTTKHHEGFTNWPSPVSWNWNSKDVGPHRDLVGELGTALRKRNIRYG LYHSLLEWFHPLYLLDKKNGFKTQHFVSAKTMPELYDLVNSYKPDLIWSDGEWECPDTYW NSTNFLSWLYNDSPVKDEVVVNDRWGQNCSCHHGGYYNCEDKFKPQSLPDHKWEMCTSID KFSWGYRRDMALSDVTEESEIISELVQTVSLGGNYLLNIGPTKDGLIVPIFQERLLAVGK WLSINGEAIYAS |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | MRAPGMRSRPAGPALLLLLLFLGAAESVRRAQPPRRYTPDWPSLDSRPLPAWFDEAKFGVFIHWGVFSVPAWGSEWFWWHWQGEGRPQYQRFMRDNYPPGFSYADFGPQFTARFFHPEEWADLFQAAGAKYVVLTTKHHEGFTNWPSPVSWNWNSKDVGPHRDLVGELGTALRKRNIRYGLYHSLLEWFHPLYLLDKKNGFKTQHFVSAKTMPELYDLVNSYKPDLIWSDGEWECPDTYWNSTNFLSWLYNDSPVKDEVVVNDRWGQNCSCHHGGYYNCEDKFKPQSLPDHKWEMCTSIDKFSWGYRRDMALSDVTEESEIISELVQTVSLGGNYLLNIGPTKDGLIVPIFQERLLAVGKWLSINGEAIYAS |
Prediction | CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCSSSSSSCCCCSCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCSSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCSSSSSSCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCSSSSSCCCCCCCCCCCHHHHHHHHHHHCHCCCCSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCSSSSSCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCSCCC |
Confidence | 981234578999999999999999876540367788899810124452658998536239999378610166652023002589981489998861799755788875189644999999999999299789998762899745689999998554679997629999999998299589996231205865677877887625899999999999999733875798626888986544479999999985301594799711158888876862257535788887998850021068888777789985578999999999999963696699814999999959999999999999998603301189 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | MRAPGMRSRPAGPALLLLLLFLGAAESVRRAQPPRRYTPDWPSLDSRPLPAWFDEAKFGVFIHWGVFSVPAWGSEWFWWHWQGEGRPQYQRFMRDNYPPGFSYADFGPQFTARFFHPEEWADLFQAAGAKYVVLTTKHHEGFTNWPSPVSWNWNSKDVGPHRDLVGELGTALRKRNIRYGLYHSLLEWFHPLYLLDKKNGFKTQHFVSAKTMPELYDLVNSYKPDLIWSDGEWECPDTYWNSTNFLSWLYNDSPVKDEVVVNDRWGQNCSCHHGGYYNCEDKFKPQSLPDHKWEMCTSIDKFSWGYRRDMALSDVTEESEIISELVQTVSLGGNYLLNIGPTKDGLIVPIFQERLLAVGKWLSINGEAIYAS |
Prediction | 854640322000100111101001012244354555152536415556335104512000000000000001000000121424424203401564324433044007504165020630050036050300000010011000020631442202423231000220050037360200000000000011022345442433510342025202100341222000000014124333304300410241233341000001124424043110001223132741351200000002210000233243641220430041004000320000000103560403650250043005005412500157 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCSSSSSSCCCCSCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCSSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCSSSSSSCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCSSSSSCCCCCCCCCCCHHHHHHHHHHHCHCCCCSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCSSSSSCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCSCCC MRAPGMRSRPAGPALLLLLLFLGAAESVRRAQPPRRYTPDWPSLDSRPLPAWFDEAKFGVFIHWGVFSVPAWGSEWFWWHWQGEGRPQYQRFMRDNYPPGFSYADFGPQFTARFFHPEEWADLFQAAGAKYVVLTTKHHEGFTNWPSPVSWNWNSKDVGPHRDLVGELGTALRKRNIRYGLYHSLLEWFHPLYLLDKKNGFKTQHFVSAKTMPELYDLVNSYKPDLIWSDGEWECPDTYWNSTNFLSWLYNDSPVKDEVVVNDRWGQNCSCHHGGYYNCEDKFKPQSLPDHKWEMCTSIDKFSWGYRRDMALSDVTEESEIISELVQTVSLGGNYLLNIGPTKDGLIVPIFQERLLAVGKWLSINGEAIYAS | |||||||||||||||||||
1 | 2zx9A | 0.38 | 0.33 | 9.73 | 1.33 | DEthreader | ----------------------------------RYKPDW-ESLREHTVPKWFDKAKFGIFIHWGIYSVPWANAEWYENSLRIKES-PTWEYHVKTYGENFEYEKFADLFTAEKWDPQEWADLFKKAGAKYVIPTTKHHDGFCLWGTKYT-DFNSVKRGPKRDLVGDLAKAVREAGLRFGVYYSGLDWRFTTEPDLSYIRPNTYEYAD-YAYKQVMELVDLYLPDVLWNDMGW-P-E-KGK-EDLKYLFAYYYNKHPEGSVNDRWG--V-P-HWDFKTAEYHVYPGDLPGYKWEFTRGIGL-SFGYNRNEGPEHMLSVEQLVYTLVDVVSKGGNLLLNVGPKGDGTIPDLQKERLLGLGEWLRKYGDAIYGT | |||||||||||||
2 | 2zx9A1 | 0.40 | 0.35 | 10.31 | 3.38 | SPARKS-K | -----------------------------------RYKPDWESLREHTVPKWFDKAKFGIFIHWGIYSVPGWATEWYENSLRIKES-PTWEYHVKTYGENFEYEKFADLFTAEKWDPQEWADLFKKAGAKYVIPTTKHHDGFCLWGTKYT-DFNSVKRGPKRDLVGDLAKAVREAGLRFGVYYSGLDWRPIRYPEDLSYIRPNTYEYADYAYKQVMELVDLYLPDVLWNDMGW-PEKGKEDLKYLFAYYYNKH---PEGSVNDRWGVP----HWDFKTAEYHVYPGDLPGYKWEFTRGIGL-SFGYNRNEGPEHMLSVEQLVYTLVDVVSKGGNLLLNVGPKGDGTIPDLQKERLLGLGEWLRKYGDAIYGT | |||||||||||||
3 | 2zx9A | 0.40 | 0.34 | 10.16 | 1.00 | MapAlign | -----------------------------------RYKPDWESLREHTVPKWFDKAKFGIFIHWGIYSVPGWAAEWYENSLRIKES-PTWEYHVKTYGENFEYEKFADLFTAEKWDPQEWADLFKKAGAKYVIPTTKHHDGFCLWGTKYT-DFNSVKRGPKRDLVGDLAKAVREAGLRFGVYYSGGDWRFTTEPIDLSYIRPNTYEYADYAYKQVMELVDLYLPDVLWNDMGW-PE--KEDLKYLFAYYYN---KHPEGSVNDRWG----VPHWDFKTAEYVNYPGDLPGYKWEFTRGIG-LSFGYNRNEGPEHMLSVEQLVYTLVDVVSKGGNLLLNVGPKGDGTIPDLQKERLLGLGEWLRKYGDAIYGT | |||||||||||||
4 | 2zx9A1 | 0.39 | 0.34 | 10.10 | 0.89 | CEthreader | -----------------------------------RYKPDWESLREHTVPKWFDKAKFGIFIHWGIYSVPGWYAEWYENSLRIKE-SPTWEYHVKTYGENFEYEKFADLFTAEKWDPQEWADLFKKAGAKYVIPTTKHHDGFCLWGTK-YTDFNSVKRGPKRDLVGDLAKAVREAGLRFGVYYSGLDWRFTTEPIRYPEDLSYIYEYADYAYKQVMELVDLYLPDVLWNDMGWPEKGKE-DLKYLFAYYYNKH---PEGSVNDRWGVP---HWDFKTAEYHVNYPGDLPGYKWEFTRGIGL-SFGYNRNEGPEHMLSVEQLVYTLVDVVSKGGNLLLNVGPKGDGTIPDLQKERLLGLGEWLRKYGDAIYGT | |||||||||||||
5 | 2zx9A1 | 0.40 | 0.35 | 10.24 | 2.54 | MUSTER | -----------------------------------RYKPDWESLREHTVPKWFDKAKFGIFIHWGIYSVPGWATEWYENSLRIKES-PTWEYHVKTYGENFEYEKFADLFTAEKWDPQEWADLFKKAGAKYVIPTTKHHDGFCLWGTKYTD-FNSVKRGPKRDLVGDLAKAVREAGLRFGVYYSGLDWRFTTEPIRYSYIRPNTYEYADYAYKQVMELVDLYLPDVLWNDMGWPEKGKE-DLKYLFAYYYNKHP---EGSVNDRWGVP----HWDFKTAEYHVYPGDLPGYKWEFTRGIG-LSFGYNRNEGPEHMLSVEQLVYTLVDVVSKGGNLLLNVGPKGDGTIPDLQKERLLGLGEWLRKYGDAIYGT | |||||||||||||
6 | 2zx9A1 | 0.39 | 0.34 | 10.16 | 2.95 | HHsearch | -----------------------------------RYKPDWESLREHTVPKWFDKAKFGIFIHWGIYSVPGWAAEWYENSLRIKE-SPTWEYHVKTYGENFEYEKFADLFTAEKWDPQEWADLFKKAGAKYVIPTTKHHDGFCLWGTKYT-DFNSVKRGPKRDLVGDLAKAVREAGLRFGVYYSGLDWRFTTEPIRYPIRPNTYEY-ADYAYKQVMELVDLYLPDVLWNDMGWPEKGKE-DLKYLFAYYYN---KHPEGSVNDRWGVP----HWDFKTAEYHVNYGDLPGYKWEFTRGIGL-SFGYNRNEGPEHMLSVEQLVYTLVDVVSKGGNLLLNVGPKGDGTIPDLQKERLLGLGEWLRKYGDAIYGT | |||||||||||||
7 | 2zx9A1 | 0.38 | 0.33 | 9.88 | 3.17 | FFAS-3D | -----------------------------------RYKPDWESLREHTVPKWFDKAKFGIFIHWGIYSVPGWATEWYENSLRIKESP-TWEYHVKTYGENFEYEKFADLFTAEKWDPQEWADLFKKAGAKYVIPTTKHHDGFCLWGTKYTD-FNSVKRGPKRDLVGDLAKAVREAGLRFGVYYSGGDWRFTTEPIRYSYIRPNTYEYADYAYKQVMELVDLYLPDVLWNDMGWPEKGKE----DLKYLFAYYYNKHPEGSVNDRWGVPHWD---FKTAEYHVNYPGDLPGYKWEFTRGIG-LSFGYNRNEGPEHMLSVEQLVYTLVDVVSKGGNLLLNVGPKGDGTIPDLQKERLLGLGEWLRKYGDAIYGT | |||||||||||||
8 | 2zx9A1 | 0.36 | 0.31 | 9.29 | 1.08 | EigenThreader | -----------------------------------RYKPDWESLREHTVPKWFDKAKFGIFIHWGIYSVPGWAYAEWYENSLRIKESPTWEYHVKTYGENFEYEKFADLFTAEKWDPQEWADLFKKAGAKYVIPTTKHHDGFCLWGTKYT-DFNSVKRGPKRDLVGDLAKAVREAGLRFGYYSGGL---DWRFTTEPIRIRPNTYEYADYAYKQVMELVDLYLPDVLWNDMGWPEK--GKEDLKYLFAYYYNKHPEG--SVNDRWGVPH----WDFKTAEYHVNYPGDLPGYKWEFTRGIGLSFGYNRNEGPEHMLSVEQLVYTLVDVVSKGGNLLLNVGPKGDGTIPDLQKERLLGLGEWLRKYGDAIYGT | |||||||||||||
9 | 2zwyA | 0.39 | 0.34 | 10.02 | 3.42 | CNFpred | -----------------------------------RYKPDWESLREHTVPKWFDKAKFGIFIHWGIYSVPGWAAEWYENSLRIK-ESPTWEYHVKTYGENFEYEKFADLFTAEKWDPQEWADLFKKAGAKYVIPTTKHHDGFCLWGTKYT-DFNSVKRGPKRDLVGDLAKAVREAGLRFGVYYSGLDWRFTTEPIRYP-IRPNTYEYADYAYKQVMELVDLYLPDVLWNDMGWPEKG-KEDLKYLFAYYYNKH---PEGSVNDRWGVPH----WDFKTAEYHVNYPDLPGYKWEFTRGIG-LSFGYNRNEGPEHMLSVEQLVYTLVDVVSKGGNLLLNVGPKGDGTIPDLQKERLLGLGEWLRKYGDAIYGT | |||||||||||||
10 | 2zx9A1 | 0.38 | 0.33 | 9.73 | 1.33 | DEthreader | ----------------------------------RYKPDW-ESLREHTVPKWFDKAKFGIFIHWGIYSVPWANAEWYENSLRIKES-PTWEYHVKTYGENFEYEKFADLFTAEKWDPQEWADLFKKAGAKYVIPTTKHHDGFCLWGTKYT-DFNSVKRGPKRDLVGDLAKAVREAGLRFGVYYSGLDWRFTTEPDLSYIRPNTYEYA-DYAYKQVMELVDLYLPDVLWNDMGW-P---EKGKEDLKYLFAYYYNKHPEGSVNDRWG--V-P-HWDFKTAEYHVYPGDLPGYKWEFTRGIGL-SFGYNRNEGPEHMLSVEQLVYTLVDVVSKGGNLLLNVGPKGDGTIPDLQKERLLGLGEWLRKYGDAIYGT | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |