Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCCCCCSSCCCSSCCCCCHHHHHHSCCCCSSSCCCCCCCCSCHHHHCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC MTMTLHTKASGMALLHQIQGNELEPLNRPQLKIPLERPLGEVYLDSSKPAVYNYPEGAAYEFNAAAAANAQVYGQTGLPYGPGSEAAAFGSNGLGGFPPLNSVSPSPLMLLHPPPQLSPFLQPHGQQVPYYLENEPSGYTVREAGPPAFYRPNSDNRRQGGRERLASTNDKGSMAMESAKETRYCAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACRLRKCYEVGMMKGGIRKDRRGGRMLKHKRQRDDGEGRGEVG |
1 | 6vyvE | 0.08 | 0.07 | 2.93 | 0.62 | CEthreader | | ------------------------SVTEHFNVYKATRPYLAYCADCGDGYFCYSPVAIEKIRDEAPDGMLKIQVSAQIGLDKAGTHAHTKIRYMAGHDVQESKRDSLRVYTSAACSIHGTMGHFIVAHCPPGDYLKVSFEDADSHVKACKVQYKHDPLPVGREKFVVRPHFGV-ELPCTSYQLTTAPTDEEIDMHTPPDIPSQTAGNVKITAGGRTIRYNCTCGRDNVGTTSTDKTINTCKIDQCHAAVTSHDKWQFTSPFVPRADQTARRGKVHVPFPLT |
2 | 7abi4 | 0.05 | 0.05 | 2.28 | 0.58 | EigenThreader | | HPNEICVPMSVEFEELLKARENPSEEAQNLVEFTDEEGYGRYLDLHDCYLKYINLKASEKLDYITYLSIFDQLFDIPKERKNAEYKRYLE-----MLLEYLQDYTDRVKPLQDQNELFGKIQAEFEKKWENGTFPGWEERAQRLFSTKGKSLESLDTSLFAKNPKSKGTKRDTERNHGLNINYNCEICGNYGPKAFQRHFAEWRHAHGMRCLGIPNT------------AHFANVTQIEDAVSLWAKLKLQKASERWQPDTEEEYEDSSGNVVNKKTYEDL |
3 | 4nqaB | 0.35 | 0.13 | 3.93 | 1.28 | FFAS-3D | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------APKMLGHELCRVCGDKASGFHYNVLSCEGCKGFFRRSVVRGGARRCRGGGTCQMDAFMRRKCQQCRLRKCKEAGMREQCVLSEEQIRKKKIRKQQQQESQSQSQS- |
4 | 3jb9A | 0.07 | 0.05 | 2.02 | 0.67 | DEthreader | | E-------------------SH--------------LVYKWCQINNLDVWCNVLME--TRLSKVF-EKV-D--------TLLNR-ASAKNNVTNSYGLVSSFIWQGLVLDLLILGL--------RYIDKVYIMFRFT-------FSMTGDGNQGNRIRQ---I--SSSTKIKWTALALMLLLV--------LSMGH-VL----------IPQ--SDLRWSKQTGITHFRS--GMTTNGEHIQALGG--VEGIEHTRANVYVGFQVQGKMSSCADIIDVQLI |
5 | 2a66A | 0.42 | 0.14 | 4.18 | 1.79 | SPARKS-K | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCPYCRFQKCLSVGMKLEAVRADRMRGGRNKFGPMYKRDRAL---- |
6 | 6w09E | 0.05 | 0.04 | 1.98 | 1.37 | MapAlign | | PYLAHCPDCGEGHSCHSP-----------------VALERIRNEATDGTLKIQVSLQIGIKTDDSHDWTKLRYMDNHMPADAERARLFVRTSAPCTITGTMGHFILAR--------------CPKGETLTVGFTDSGKISHSCTHPTAEEIEVHMPPDTPDRTLMSQQSGNVKITVNSQTVRYKCNCGNEGLTTCKVDQCHAAQVIMLLYPDHPTLLSYRNMGEEPNYQEE--WVTHKKEVIRTVPTEGLEVTWGNNEPYKYWPQ---------------- |
7 | 3dzuA | 0.47 | 0.12 | 3.63 | 3.12 | CNFpred | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQ------------------------- |
8 | 6vyvE | 0.05 | 0.04 | 1.88 | 1.32 | MapAlign | | PYLAYCADCGDGYFCYSP-----------------VAIEKIRDEAPDGMLKIQVSAQIGLDKAGTHAHTKIRYMAGHDVQESKRDSLRVYTSAACSIHGTMGHFIV--------------AHCPPGDYLKVSFEDADSHVKACKVQTDEEIDMHTPPDIPDRTLLSQTAGNVKITAGGRTIRYNCTCGRDNVGTTSTDKTINTCKIDQCHPDHPTLFSYRSLGAEPHPYEE--WVDKFSERIIPVTEEGIEYQWGNNPPVRLWAQ---------------- |
9 | 1lo1A | 0.63 | 0.20 | 5.80 | 1.05 | MUSTER | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AIPKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQACRFMKALKVGMLKEGVRLDRVRGGRQKYK------------- |
10 | 3fm8C | 0.08 | 0.07 | 2.86 | 1.18 | MapAlign | | PGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNIPQVSKVKSVRLDAWEEAQVEFMASHGNDAARAYREGFLWKRGRDNGQFLSRKFVLTEREGALKYFNREPKAVMKIEHLNATFQPAKIGHPHGLQVTYLKDNSTRNIFIYDWFNALRAARFHYLQVAFPGASDADLVPKLSRNYLKEGYMEKFKRWFTMDDRRLMYFKARGEVFIGSKESGYTVGFPWPHGITIVFLFACETESDQREWVAAF-QKAVDRPMLPQEYAVE---------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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