>P02775 (128 residues) MSLRLDTTPSCNSARPLHALQVLLLLSLLLTALASSTKGQTKRNLAKGKEESLDSDLYAE LRCMCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIVQKK LAGDESAD |
Sequence |
20 40 60 80 100 120 | | | | | | MSLRLDTTPSCNSARPLHALQVLLLLSLLLTALASSTKGQTKRNLAKGKEESLDSDLYAELRCMCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIVQKKLAGDESAD |
Prediction | CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCSCCCCCCCCCHHHSSSSSSSCCCCCCCCCSSSSSSCCCCSSSCCCCCHHHHHHHHHHHHHCCCCC |
Confidence | 98667888878888841455689999999999998612410221023433223443346666221343578893342489987489989982899997389789669997899999999997166889 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 | | | | | | MSLRLDTTPSCNSARPLHALQVLLLLSLLLTALASSTKGQTKRNLAKGKEESLDSDLYAELRCMCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIVQKKLAGDESAD |
Prediction | 77243643541544433421412113213311112234344345244445444445244613041353365043630550413443450643301010366542102272620340052027566778 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 | | | | | | | |||||||||||||
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SS Seq | CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCSCCCCCCCCCHHHSSSSSSSCCCCCCCCCSSSSSSCCCCSSSCCCCCHHHHHHHHHHHHHCCCCC MSLRLDTTPSCNSARPLHALQVLLLLSLLLTALASSTKGQTKRNLAKGKEESLDSDLYAELRCMCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIVQKKLAGDESAD | |||||||||||||||||||
1 | 5me3A1 | 0.08 | 0.06 | 2.52 | 0.83 | DEthreader | -----SPDEQHDLIAHHAATQSDLEFAADHIIDTILKKFYIVALQKLRSGAIRLVAILEIVMNIIYDDTE-DII-IKAYASLRRIIIETARSEL-----------KRWICSIRVIAQ-LLV-GDKC-- | |||||||||||||
2 | 1f9pA | 1.00 | 0.63 | 17.72 | 2.71 | SPARKS-K | -------------------------------------------NLAKGKEESLDSDLYAELRCMCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIVQKKLAGD---- | |||||||||||||
3 | 1mgsA | 0.60 | 0.30 | 8.51 | 0.84 | MapAlign | ------------------------------------------------------------LRCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVKKIIEKMLNS----- | |||||||||||||
4 | 1mgsA | 0.56 | 0.32 | 9.22 | 0.74 | CEthreader | ------------------------------------------------------ASVATELRCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVKKIIEKMLNSDKSN- | |||||||||||||
5 | 1f9pA | 1.00 | 0.63 | 17.72 | 1.73 | MUSTER | -------------------------------------------NLAKGKEESLDSDLYAELRCMCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIVQKKLAGD---- | |||||||||||||
6 | 1f9pA | 1.00 | 0.63 | 17.72 | 2.02 | HHsearch | -------------------------------------------NLAKGKEESLDSDLYAELRCMCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIVQKKLAGD---- | |||||||||||||
7 | 1f9pA | 1.00 | 0.63 | 17.72 | 1.36 | FFAS-3D | -------------------------------------------NLAKGKEESLDSDLYAELRCMCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIVQKKLAGD---- | |||||||||||||
8 | 1f9pA | 0.93 | 0.59 | 16.45 | 0.58 | EigenThreader | -------------------------------------NLAK------GKEESLDSDLYAELRCMCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIVQKKLA--GD-- | |||||||||||||
9 | 1f9pA | 1.00 | 0.63 | 17.72 | 1.37 | CNFpred | -------------------------------------------NLAKGKEESLDSDLYAELRCMCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIVQKKLAGD---- | |||||||||||||
10 | 5me3A | 0.06 | 0.05 | 2.10 | 0.83 | DEthreader | -----SPDELHDLIAHHAATQSDLEFAADHIIDTILKKFIIVALQKLRSGAIRLVAILEIVMNQIIYDDTEDII-IKAYASLRRIIIETARSEL-----------KRWICSIRVIAQLLVCDK--R-- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |