>P01920 (125 residues) MSWKKALRIPGGLRAATVTLMLAMLSTPVAEGRDSPEDFVYQFKAMCYFTNGTERVRYVT RYIYNREEYARFDSDVEVYRAVTPLGPPDAEYWNSQKEVLERTRAELDTVCRHNYQLELR TTLQR |
Sequence |
20 40 60 80 100 120 | | | | | | MSWKKALRIPGGLRAATVTLMLAMLSTPVAEGRDSPEDFVYQFKAMCYFTNGTERVRYVTRYIYNREEYARFDSDVEVYRAVTPLGPPDAEYWNSQKEVLERTRAELDTVCRHNYQLELRTTLQR |
Prediction | CCCCSSSSCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHSSSSSSSSSSSCCCCSSSSSSSSSSCCSSSSSSSCCCCSSSSCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCCCSCCCSSSCC |
Confidence | 98515676278545999999999818722216689802348774466665697058988666655515667715776577228888732566527879999988543110136742255552159 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 | | | | | | MSWKKALRIPGGLRAATVTLMLAMLSTPVAEGRDSPEDFVYQFKAMCYFTNGTERVRYVTRYIYNREEYARFDSDVEVYRAVTPLGPPDAEYWNSQKEVLERTRAELDTVCRHNYQLELRTTLQR |
Prediction | 65410001124332110010000001233331453363012113230213323420220422013321301010223422221433344063234344304533431112012114144424266 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 | | | | | | | |||||||||||||
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SS Seq | CCCCSSSSCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHSSSSSSSSSSSCCCCSSSSSSSSSSCCSSSSSSSCCCCSSSSCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCCCSCCCSSSCC MSWKKALRIPGGLRAATVTLMLAMLSTPVAEGRDSPEDFVYQFKAMCYFTNGTERVRYVTRYIYNREEYARFDSDVEVYRAVTPLGPPDAEYWNSQKEVLERTRAELDTVCRHNYQLELRTTLQR | |||||||||||||||||||
1 | 6kvmB | 0.49 | 0.36 | 10.45 | 1.00 | DEthreader | ---------------------------------PS-AFFFCGAISECHYLNGTERVRYLQRYIYNRQQYAHFDSDVGKFVADSPLGEPQAEYWNSNAELLENRMNEVDRFCRHNYGGVESFVQRS | |||||||||||||
2 | 6t3yB1 | 0.44 | 0.38 | 11.01 | 3.85 | SPARKS-K | ------------------IESLSLNGVPNIFLSTKSAFFFCGAIFECHYLNGTERVRYLQRYIYNRQQLVHFDSDVGKFVADTPLGEPQAEYWNSNAELLENIMNIADGSCRHNYGILESFTVQR | |||||||||||||
3 | 6kvmB | 0.53 | 0.37 | 10.62 | 0.61 | MapAlign | --------------------------------------FFCGAISECHYLNGTERVRYLQRYIYNRQQYAHFDSDVGKFVADSPLGEPQAEYWNSNAELLENRMNEVDRFCRHNYGGVESFTVQ- | |||||||||||||
4 | 6kvmB1 | 0.51 | 0.38 | 10.89 | 0.43 | CEthreader | ---------------------------------RPSAFFFCGAISECHYLNGTERVRYLQRYIYNRQQYAHFDSDVGKFVADSPLGEPQAEYWNSNAELLENRMNEVDRFCRHNYGGVESFTVQR | |||||||||||||
5 | 1i3rB1 | 0.47 | 0.44 | 12.82 | 3.13 | MUSTER | KKVITAFN-------EGLKGGGGSLVGGGSGGGGSRPWFLEYCKSECHFYNGTQRVRLLVRYFYNLEENLRFDSDVGEFRAVTELGRPDAENWNSQPEFLEQKRAEVDTVCRHNYEIFDNFLVPR | |||||||||||||
6 | 1i3rB1 | 0.46 | 0.44 | 12.83 | 2.68 | HHsearch | -GKKVITAFNE-----GLKGGGGSLVGGGSGGGGSRPWFLEYCKSECHFYNGTQRVRLLVRYFYNLEENLRFDSDVGEFRAVTELGRPDAENWNSQPEFLEQKRAEVDTVCRHNYEIFDNFLVPR | |||||||||||||
7 | 6t3yB1 | 0.45 | 0.38 | 10.98 | 2.00 | FFAS-3D | ---------------------LSLNGVPNIFLSTKSAFFFCGAIFECHYLNGTERVRYLQRYIYNRQQLVHFDSDVGKFVADTPLGEPQAEYWNSNAELLENIMNIADGSCRHNYGILESFTVQR | |||||||||||||
8 | 6kyuA1 | 0.15 | 0.14 | 4.88 | 0.85 | EigenThreader | ADWFAANTDQQYWDRQTEISRGAEQIFRLDLETLRERYHTWQLMYGCDLL-EDGSTRGFRQYGYEGRDFVAFDKDTLTFTAADAGAQITKRKWEQEGTDAERWKFYLENTCIEGLRKYVSYGKDV | |||||||||||||
9 | 5ks9B | 0.96 | 0.70 | 19.74 | 1.79 | CNFpred | ---------------------------------DSPEDFVYQFKGMCYFTNGTERVRLVTRYIYNREEYARFDSDVGVYRAVTPLGPPAAEYWNSQKEVLERTRAELDTVCRHNYQLELRTTLQR | |||||||||||||
10 | 6kvmB1 | 0.52 | 0.37 | 10.65 | 1.00 | DEthreader | ---------------------------------SA--FFFCGAISECHYLNGTERVRYLQRYIYNRQQYAHFDSDVGKFVADSPLGEPQAEYWNSNAELLENRMNEVDRFCRHNYGGVESFV-QR | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |