Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| SS Seq | CCCCCCCCSSCCCSSSSSSCCCSSCCCCCCCCCCCCCCCCCCCCCCCSSSSSCCCCSSSSSCCCCCSSCCCCSSSSCCCCCSCCCCCCCCCCCCCCCSSSSSCCCCCCCCCCSSSCCCCCSCCCCSSSSSSCCCCSSSCCCSSSSCCCCSSCCCCCSSCCCCCCCCCCCCCCCSSSCCCCCCCCCSSSSSSCCCCSSCCCCCSSSCCCCSSCCCCCSSSCCCC MGSNLSPQLCLMPFILGLLSGGVTTTPWSLARPQGSCSLEGVEIKGGSFRLLQEGQALEYVCPSGFYPYPVQTRTCRSTGSWSTLKTQDQKTVRKAECRAIHCPRPHDFENGEYWPRSPYYNVSDEISFHCYDGYTLRGSANRTCQVNGRWSGQTAICDNGAGYCSNPGIPIGTRKVGSQYRLEDSVTYHCSRGLTLRGSQRRTCQEGGSWSGTEPSCQDSFM |
1 | 3t5oA | 0.19 | 0.14 | 4.63 | 1.00 | DEthreader | | CGTKAVCT-KY-PI-VQMGNGEVLDNSFPNLVLNFTTKADLHL----------------------------------TSG--------NDDEE------DSGCPQPVPPENGFIRNEKQLYLVGEDVEISCLTGFETVGYQYFRCLPDGTWRQGDVECQR-TECI-KPVVQEVLTITFQRLYRIESIELTCPKGFVVAGPSRYTCQG-NSWTPPILTCEKDHH |
2 | 2ok5A | 1.00 | 0.85 | 23.86 | 3.03 | SPARKS-K | | ---------------------------------QGSCSLEGVEIKGGSFRLLQEGQALEYVCPSGFYPYPVQTRTCRSTGSWSTLKTQDQKTVRKAECRAIHCPRPHDFENGEYWPRSPYYNVSDEISFHCYDGYTLRGSANRTCQVNGRWSGQTAICDNGAGYCSNPGIPIGTRKVGSQYRLEDSVTYHCSRGLTLRGSQRRTCQEGGSWSGTEPSCQDSFM |
3 | 1c1zA | 0.21 | 0.19 | 5.97 | 0.97 | MapAlign | | ----------SRGGMRKFICPLTGLWPINTLKCTPRVCPFAGILENGAVRYTEYPNTISFSCNTGFYLNGADSAKCTEEGKWSPE---------LPVCAPIICPPPSIPTFATLRYAGNNSLYRDTAVFECLPQHAMFGNDTITCTTHGNWT-KLPECRE--VKCPFPSRPDNGFVNYPTLYYKDKATFGCHDGYSLDGPEEIECTKLGNWSA-MPSCKAS-- |
4 | 3erbA | 0.50 | 0.39 | 11.45 | 0.64 | CEthreader | | -----------------------------------SCP-QNVNISGGTFTLSHGGSLLTYSCPQGLYPSPA-SRLCKSSGQWQTPK---------AVCKPVRCPAPVSFENGIYTPRLGSYPVGGNVSFECEDGFILRGSPVRQCRPNGMWDGETAVCDNGAGHCPNPGISLGAVRTGFRFGHGDKVRYRCSSNLVLTGSSERECQGNGVWSGTEPICRQPYS |
5 | 2ok5A | 1.00 | 0.85 | 23.86 | 1.98 | MUSTER | | ---------------------------------QGSCSLEGVEIKGGSFRLLQEGQALEYVCPSGFYPYPVQTRTCRSTGSWSTLKTQDQKTVRKAECRAIHCPRPHDFENGEYWPRSPYYNVSDEISFHCYDGYTLRGSANRTCQVNGRWSGQTAICDNGAGYCSNPGIPIGTRKVGSQYRLEDSVTYHCSRGLTLRGSQRRTCQEGGSWSGTEPSCQDSFM |
6 | 2q7zA | 0.26 | 0.24 | 7.48 | 1.69 | HHsearch | | FVCDEGFRLKGRSASHCVLKALWNSSVPVC--EQIFCP-NPPAILNGRHTGTDIGKEISYACDTTFNLIGESSIRCTSNGVWSSP---------APRCELAACPHPPKIQNGHYIGGVSLYLPGMTISYICDPGYLLVGKGFIFCTDQGIWSQLDHYCKEV--NCSFPLFMNGISKEKKVYHYGDYVTLKCEDGYTLEGSPWSQCQADDRWDPPLAKCTSRAH |
7 | 3erbA | 0.47 | 0.37 | 10.84 | 1.63 | FFAS-3D | | -----------------------------------SCPQNVNISGGTFTLGWAPGSLLTYSCPQGLYPSP-ASRLCKSSGQWQTP---------KAVCKPVRCPAPVSFENGIYTPRLGSYPVGGNVSFECEDGFILRGSPVRQCRPNGMWDGETAVCDNGAGHCPNPGISLGAVRTGFRFGHGDKVRYRCSSNLVLTGSSERECQGNGVWSGTEPICRQP-- |
8 | 1ojyC | 0.23 | 0.20 | 6.33 | 1.33 | EigenThreader | | LPPDVPN---------AQPALEGRTSFP--EDTDIEEFCEVPTRLNSASLKFPVGTVVEYECRPGYRRELSPKLTCLQNLKWSTA---------VEFCKKKSCPNPGEIRNGQIDVPGGIL-FGATISFSCNTGYKLFGSTSSFCLSSVQWSDPLPECREI--YCPAPPQI-DNGIIRDHYGYRQSVTYACNKGFTMIGEHSIYCTNDEGEWSGPPPECRG-- |
9 | 2ok5A | 1.00 | 0.85 | 23.86 | 5.28 | CNFpred | | ---------------------------------QGSCSLEGVEIKGGSFRLLQEGQALEYVCPSGFYPYPVQTRTCRSTGSWSTLKTQDQKTVRKAECRAIHCPRPHDFENGEYWPRSPYYNVSDEISFHCYDGYTLRGSANRTCQVNGRWSGQTAICDNGAGYCSNPGIPIGTRKVGSQYRLEDSVTYHCSRGLTLRGSQRRTCQEGGSWSGTEPSCQDSFM |
10 | 2wiiC | 0.22 | 0.17 | 5.52 | 1.00 | DEthreader | | ----------------GYRS-----------KCQK-RPCGHPGDTPGTFTLTGGGVKAVYTCNEGYQLLGINYRECD-TDGWTN--------DI-PICEVVKCLPVTAPENGKIVSAMERYHFGQAVRFVCNSGYKIEGDEEMHCSDDGFWSKEKPKCVE-ISCKSPDVI--NGSPIQKIIYKEERFQYKCNMGYEYSERGDAVCTESGWRPLPSCEEA---- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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