Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340
| | | | | | | | | | | | | | | | | |
| SS Seq | CCSSSSSCCSSSCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCSSCCCCCCCSCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSCCCCCSSSCCCCCCCCCCSSCCCCCCCCCCCCCCCSSSCCCCCSSSSCCCCCCCCCCCSCCCCCCCCCCCCCCCCSSCCCCCCCSCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCCSCSSSSCCCCCCCCCCCCCCCCCCCCCSCCCCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MRALLLLGFLLVSLESTLSIPPWEAPKEHKYKAEEHTVVLTVTGEPCHFPFQYHRQLYHKCTHKGRPGPQPWCATTPNFDQDQRWGYCLEPKKVKDHCSKHSPCQKGGTCVNMPSGPHCLCPQHLTGNHCQKEKCFEPQLLRFFHKNEIWYRTEQAAVARCQCKGPDAHCQRLASQACRTNPCLHGGRCLEVEGHRLCHCPVGYTGAFCDVDTKASCYDGRGLSYRGLARTTLSGAPCQPWASEATYRNVTAEQARNWGLGGHAFCRNPDNDIRPWCFVLNRDRLSWEYCDLAQCQTPTQAAPPTPVSPRLHVPLMPAQPAPPKPQPTTRTPPQSQTPGALPAKREQPPSL |
1 | 4xbmB | 0.14 | 0.12 | 4.16 | 1.25 | FFAS-3D | | ------SGVFELKLQEFNKKGLLGNRNCCRAGPPPCACRTFF--RVCLKHYQASVSPEPPCTYGSAVTPVIEALHTDSPDPERLISRLATQRHLTVGEEW-SQDLHSSGRTDLKYSYRFVCDEHYYGEGCSVFCRPRDDAFGHCGERGEKVCNPGPWQCNCQEGWGGLFCNQDLNYCTHHKPCKNGATCTNTQGSYTCSCRPGYTGATCELGIDECSCTDLENSYSCTCPPGFYGKICELSAMTCADGPCFNGGRCSDSPDGGYSCRCPVGYSGFNC------EKKIDYCSSSPCSNGAKCVDLGDAYLCRCH-------------------------------------- |
2 | 4xbmB | 0.16 | 0.13 | 4.34 | 3.58 | SPARKS-K | | HTDSPDPERLISRLATQRHLTVGEEWSQDLHSSGRT---DLKYSYRFVCDEHYYGEGSVFCRPRDDAFGHFTCGCNPGWKGPYC---------TEPICLPGC-DEQHGFC---DKPGECKCRVGWQGRYCDE--CIRYPG----CLHGTC---QQPWQ--CNCQEGWLFCN-QDLNYCTHKPCKNGATCTNTQGSYTCSCRPGYTGATCELGIDGSCTDLENS-YSCTCPPGFYGKICEL-SAMTCADGPCFNGGRCSDSPDGYSCRCPVGYS------GFNCEKKIDYCSSSPCSNGAKCVDLGDAYLCRCHCDD----------------------------------- |
3 | 6pogB | 0.20 | 0.11 | 3.66 | 3.71 | CNFpred | | -----------------------------------------------------------------------------------------------DFCSERHNCMENSICRNLNDRAVCSCRDGFRALREDNAYCEDIDERHYCRENTMCVNTP--GSFMCICKTGYIRIDYSCTDECIQHNCDENALCFNTVGGHNCVCKPGYTGNTCKAFCKDGCRNG-IAANVCACPQGFTGPSCETDIDECSDFVQCDSRANCINLPGWYHCECRDGYHDNGMFSPSESCEDIDECGT-SCANDTICFNL----------------------------------------------- |
4 | 4xbmB | 0.15 | 0.11 | 3.84 | 2.12 | MUSTER | | SGRTDLKYSYRFVCDEHYYGEGCSVFCRPRDDAFGHTCG---ERGEKVCNPGWKGPYCTEPICLPGCDEQ-HGFCDKPGECKCRVGWQGRYCDE----CIRYPGCLHGTC---QQPWQCNCQEGWGGLFCNQDLNYCTH-HKPCKNGATCTNTQGSYTCSCRPGYTGATCEL-GIDECDPSPCKNGGSCTDLENSYSCTCPPGFYGKICELSAMTCADGPCFNGGRCSDSPD-----------------------------GGYSCRCPVG------YSGFNCEKKIDYCSSSPCSNGAKCVDLGDAYLCRCHCDD----------------------------------- |
5 | 4xbmB | 0.17 | 0.14 | 4.49 | 1.96 | HHsearch | | IRFPFFTWPGTFSIIEALHTDSPETEEWSQD-LHSSGRTDLKYSYRFVCDEHYYGEGCSFCRPRDDCGERGEKVCNPGWKGPYCT---------EPIC-LPGCDEQHGFCDK---PGECKCRVGWQGRYCDE--CIRYPG----CLHGTCQQ-----PWQCNCQEGWLFCN-QDLNYCTHKPCKNGATCTNTQGSYTCSCRPGYTGATCELGNGGSCTD-LENSYSCTCPPGFYGKICELAMTCA--DGPCFNGGRCSDSPDGYSCRCPVG------YSGFNCEKKIDYCSSSPCSNGAKCVDLGD------------AYLCRCHCDD----------------------- |
6 | 2vj3A | 0.29 | 0.10 | 2.95 | 1.05 | FFAS-3D | | --------------------------------------------------------------------------------------------QDVDECLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDV--NECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEVN-TDECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQVDLH----------------------------------------------------------------------------------------------------------------------------------------- |
7 | 6pogB | 0.17 | 0.11 | 3.46 | 3.55 | SPARKS-K | | -----------------------------------------------------------------------------------------------DFCSERHNCMENSICRNLNDRAVCSCRDGFRALREDNAYCIDECAEHYCRENTMCVNTP--GSFMCICKTGYIRIDDYEHDECIQHNCDENALCFNTVGGHNCVCKPGYTGNFCKCRNGGACIAAN----VCACPQGFTGPSCEDIDECSDGFVQCDSRANCINLPGWYHCECRDGYNGMFSPSGESC-EDIDEC-GTSCANDTICFNLDGGYDCRCCTGHHHH-------------------------------- |
8 | 5uk5A | 0.26 | 0.13 | 3.96 | 3.53 | CNFpred | | -------------------------------------------------------------------------------------------------CQLMNACQNGGTCHNSHGGYNCVCVNGWTGEDCSENID--DCASAACFQGATCHDRV--ASFYCECPHGRTLCHLN--DACISNPCNEGSNCDTNNGKAICTCPSGYTGPACSQD-AGKCLNTL-GSFECQCLQGYTGPRCEIDVNE-CISNPCQNDATCLDQIGEFQCICMPGYEGVYCESGR---------------------------------------------------------------------- |
9 | 5uk5A | 0.20 | 0.11 | 3.46 | 1.74 | MUSTER | | -------------------------ECMPNACQNGGTCHNSHGGYNCVCVNGWTGEDCSENIDD----------------------------------CASAACFQGATCHDRVASFYCECPHGRTGLLCHLN---DACISNPCNEGSNCDTNPVNGKAICTCPSGGPACSQDVDECALANPCEHAGKCLNTLGSFECQCLQGYTGPRCEIDVNE----------------------C--------ISNPCQNDATCLDQIGEFQCICMPG------YEGVYCESGR---------------------------------------------------------------- |
10 | 4xbmB | 0.20 | 0.14 | 4.55 | 1.88 | HHsearch | | ISRLATQRHLTVGEWSQHDLEHGCSFCRPRDAFGHFTCGE---RGEKVCNPGWKGPYCTICLPGGFCDKPGECKCRVGWQGRYC-----------DEC-IRYPGCLHGTCQQ---PWQCNCQEGWGGLFCNQDLCTH---HKPCKNGATCTNT-GQGSYTCSCRPGYATCE-LGIDECDPSPCKNGGSCTDLENSYSCTCPPGFYGKICELSNGGRCSDSPDGGYSCRCPVGYSGFNCEKIDYCSS--SPCSNGAKCVDLGDAYLCRCHCDD------------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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