>P00325 (129 residues) VTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKK PIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLL LTGRTWKGA |
Sequence |
20 40 60 80 100 120 | | | | | | VTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLLLTGRTWKGA |
Prediction | CCCCCSSSSSCCCHHHHHHHHHHHHHCCCSSSSSCCCHHHHHHHHHHCCCSSSCCCCCCCHHHHHHHHHCCCCCSSSSSCCCCHHHHHHHHHHHHCCCCSSSSSCCCCCCCSSSCCHHHSSCCCSSSCC |
Confidence | 999868999889869999999999919984999809989999999919977858756884399999997199764999933899999999999625998899993789994564173553537499758 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 | | | | | | VTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLLLTGRTWKGA |
Prediction | 854421000210221010000002324244000013366125204714031002076266203400441373101000001232500320041025441100000024573615142231144342467 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 | | | | | | | |||||||||||||
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SS Seq | CCCCCSSSSSCCCHHHHHHHHHHHHHCCCSSSSSCCCHHHHHHHHHHCCCSSSCCCCCCCHHHHHHHHHCCCCCSSSSSCCCCHHHHHHHHHHHHCCCCSSSSSCCCCCCCSSSCCHHHSSCCCSSSCC VTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLLLTGRTWKGA | |||||||||||||||||||
1 | 1p0fA | 0.60 | 0.60 | 17.12 | 1.50 | DEthreader | VTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGRSLKGS | |||||||||||||
2 | 7jqaA2 | 0.85 | 0.85 | 24.02 | 1.58 | SPARKS-K | VTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGA | |||||||||||||
3 | 7jqaA | 0.85 | 0.85 | 24.02 | 0.63 | MapAlign | VTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGA | |||||||||||||
4 | 7jqaA2 | 0.85 | 0.85 | 24.02 | 0.46 | CEthreader | VTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGA | |||||||||||||
5 | 1axeA | 0.85 | 0.85 | 24.02 | 1.31 | MUSTER | VTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGA | |||||||||||||
6 | 5tnxA | 0.39 | 0.38 | 11.23 | 0.70 | HHsearch | VRTGSSFASFGAGAVGMSAVMAARIAGATTIIAVDIVPSRLALALELGATHAINSKEV--DVVDAIREITGGGVDYALESTGLPAVLSQGIDALGSR-GTMGVVGAPKLGTKAEFDVNSLLGGHTIRGI | |||||||||||||
7 | 7jqaA2 | 0.85 | 0.85 | 24.02 | 1.55 | FFAS-3D | VTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGA | |||||||||||||
8 | 1axeA2 | 0.85 | 0.85 | 24.02 | 0.42 | EigenThreader | VTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGA | |||||||||||||
9 | 1ht0A | 0.98 | 0.98 | 27.37 | 1.58 | CNFpred | VTPGSTCAVFGLGGVGLSVVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGQLDTMMASLLCCHEACGTSVIVGVPPDSQNLSINPMLLLTGRTWKGA | |||||||||||||
10 | 1p0fA2 | 0.60 | 0.60 | 17.12 | 1.50 | DEthreader | VTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGRSLKGS | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |