Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHCCC MAAIAASEVLVDSAEEGSLAAAAELAAQKREQRLRKFRELHLMRNEARKLNHQEVVEEDKRLKLPANWEAKKARLEWELKEEEKKKECAARGEDYEKVKLLEISAEDAERWERKKKRKNPDLGFSDYAAAQLRQYHRLTKQIKPDMETYERLREKHGEEFFPTSNSLLHGTHVPSTEEIDRMVIDLEKQIEKRDKYSRRRPYNDDADIDYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV |
1 | 5xjcM | 1.00 | 0.53 | 14.98 | 2.08 | FFAS-3D | | -----------------------------------------------------------------------------------------------------------------KKKRKNPDLGFSDYAAAQLRQYHRLTKQIKPDMETYERLREKHGEEFFPTSNSLLHGTHVPSTEEIDRMVIDLEKQIEKRDKYSRRRPYNDDADIDYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV |
2 | 7dl2D | 0.09 | 0.07 | 2.85 | 1.03 | FFAS-3D | | ------------QKEQARYNQLQEQRDTMVTKLHSQIRQLQHDREEFYNQSQTKLEDCRNMIAELRIELKKANNKVCHTELLLSQVSQKLSNSESVQQQMEFLNREVNELYLEQLQNKHSDT--TKEVEMMKAAYRKELEKNRSHVLQQTQRLDTS-------------------QKRILELESHLAKKDHLLLEQKKYLEDVKLQARGQLQAAESRYEKRITQVFELEILDLYGRLEK---- |
3 | 5xjcM | 1.00 | 0.53 | 14.98 | 1.46 | SPARKS-K | | -----------------------------------------------------------------------------------------------------------------KKKRKNPDLGFSDYAAAQLRQYHRLTKQIKPDMETYERLREKHGEEFFPTSNSLLHGTHVPSTEEIDRMVIDLEKQIEKRDKYSRRRPYNDDADIDYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV |
4 | 6irdB | 0.10 | 0.08 | 3.07 | 1.03 | FFAS-3D | | -----------------------AAYLAHLAAQQAELNSLKAAHAAEHSTMQKLHCTQVDKIVAQYDKEKSTHEKILEKAMKTLTTDHKSKVKEIVAQHTKEWSINTHSAEEQEIRDLHLSQQCELLRKLLINAHEQQTQQLKLSHDRESKERAHQAKISMENSKAISQDKSIKNKAERERRVRELNSSNTKKFLEERKR----------LAMKQSKEMDQLKKVQLEHLEFLEKQNEQ---- |
5 | 5xjcM | 1.00 | 0.53 | 14.98 | 1.29 | MUSTER | | -----------------------------------------------------------------------------------------------------------------KKKRKNPDLGFSDYAAAQLRQYHRLTKQIKPDMETYERLREKHGEEFFPTSNSLLHGTHVPSTEEIDRMVIDLEKQIEKRDKYSRRRPYNDDADIDYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV |
6 | 5xjcM | 1.00 | 0.53 | 14.98 | 6.81 | HHsearch | | -----------------------------------------------------------------------------------------------------------------KKKRKNPDLGFSDYAAAQLRQYHRLTKQIKPDMETYERLREKHGEEFFPTSNSLLHGTHVPSTEEIDRMVIDLEKQIEKRDKYSRRRPYNDDADIDYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV |
7 | 2w6dA2 | 0.09 | 0.09 | 3.33 | 0.49 | CEthreader | | VNELKKRIDSVEPEFNKLTGIRDEFQKEIINTRDTQARTISESFRSYVLNLGNTFENDFLRYQPELNLFDFLSSGKREAFNAALQKAFEQY--ITDKSAAWTLTAEKDINAAFKELSRSASQYGASYNQITDQITEKLTGKDVEDNSPGWAKWAMGLLSLSKGNGFALAGAGFDWKNILLNYFTVIGIGGIITAVTGQADQARRELVKTAKKELVKHLPQVAHEQSQVVYNAVKECFDSYERE |
8 | 5w3sA | 0.05 | 0.05 | 2.33 | 0.60 | EigenThreader | | RRKLKFFFMNPCEKFWARPWKLAIQILKIAMVTIQLVLFGLSNQMVVAFKEENTVAFKHLFLKGYIDRMDDTYAVYTQSDVYDQIIFAVNQYLQLYQVSDAFVILTCLVSLILCIRSVISGLQLQQEFVNFFLLHYKWYIMIIISDILTIIGSILKMEIQAKSLTS-YDVCSILLGTSTMLVWLGVIRYGYCFCGWIVLGPYHNKFRSLNMVSECLFSLINLVWLFSRIYLYSFISLFIYMIL |
9 | 5gmkI | 0.14 | 0.06 | 1.95 | 1.20 | FFAS-3D | | --------------------------------------------------------------------------------------------------------------------------GGISYDQLAKLSYEKTLRNLATQTQNSSKQDKVQKDTKTGKIT------IADDDKLVNKLAVSLQSESKKRYEARKRQMKTLYGVESFINDKNKQFNEKLSRE------------------ |
10 | 6yvuB | 0.12 | 0.12 | 4.11 | 1.00 | SPARKS-K | | RSKLFQFKLLQSNSKLASTLEKISSSNKDLEDEKMKFQESLKKVDEIKAQRKEIKDRISSCSSEKTLVLERRELEGTRVSLEERTKNLVSKMEKEKTLKSTKHSISEAENMLEELRGQQTEKDLTQLLEKERSILDDIKLSLKDKTKNISAEIIRHEKELEPWDLQLQEKESQIQEETQAKLKKNVETLEEKILAKKTHKQELQDLKLNSLKDERSQGEKNFTSAHLKVLNAHRQRAMEARSS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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