Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620 640
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| SS Seq | CCCCCCCCCCCCSSSSSSSSCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCSSSSSSCCCCCCCSSSSSSSCCCCCHHHHHHHHHHHHHHHHCCCSSSSSSCCCCCHHHHHHHHHCHHHCCCCCCCCSSSSSCCSSSSSCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCSSSSSCCHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCSSSSSSCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC MEETMKLATMEDTVEYCLFLIPDESRDSDKHKEILQKYIERIITRFAPMLVPYIWQNQPFNLKYKPGKGGVPAHMFGVTKFGDNIEDEWFIVYVIKQITKEFPELVARIEDNDGEFLLIEAADFLPKWLDPENSTNRVFFCHGELCIIPAPRKSGAESWLPTTPPTIPQALNIITAHSEKILASESIRAAVNRRIRGYPEKIQASLHRAHCFLPAGIVAVLKQRPRLVAAAVQAFYLRDPIDLRACRVFKTFLPETRIMTSVTFTKCLYAQLVQQRFVPDRRSGYRLPPPSDPQYRAHELGMKLAHGFEILCSKCSPHFSDCKKSLVTASPLWASFLESLKKNDYFKGLIEGSAQYRERLEMAENYFQLSVDWPESSLAMSPGEEILTLLQTIPFDIEDLKKEAANLPPEDDDQWLDLSPDQLDQLLQEAVGKKESESVSKEEKEQNYDLTEVSESMKAFISKVSTHKGAELPREPSEAPITFDADSFLNYFDKILGPRPNESDSDDLDDEDFECLDSDDDLDFETHEPGEEASLKGTLDNLKSYMAQMDQELAHTCISKSFTTRNQVEPVSQTTDNNSDEEDSGTGESVMAPVDVDLNLVSNILESYSSQAGLAGPASNLLQSMGVQLPDNTDHRPTSKPTKN |
1 | 4m5dA | 0.07 | 0.06 | 2.33 | 1.00 | EigenThreader | | TNISRFDNLKYDLCYDVQL-----PLGKYNNLETSLNFLAHKITNVARYAL------GDRIEMVGGGNHFNFDFVRVLIVNPSEC----------------DKLVTKGPAHSETMS-------TEAAVFKNFWGIKSSLRRFKDTHCCVWSTSSSEPIISSIVNFALQKHVKKFHNFLTSVLNLSSFFNLKKSFDDLYKIIFQMKLPKSILPVGSAFRYTSLCQPV----------------------PFAYSDPDFFQDVIFE------------------TSPKWPDEITSLEKAKTAFLLKIQEELSANSSTYESIPYNLEIVLT-ERDEILYLRAIANARNEL------KPELEATFLKFTAKYL----------ASVRHTRTLENISHSYQFLFKRWLDTHLLLGHI-----TDELAELIAIKPFVDPAPYFIPGS--------LENGFLKVLKFISQWNWKDDPLDLV---KPEERLTLAQYKGIQMNFTNLRNSDPNGTHLQFFVASKNDPSGILYSSGIP-----LPIATRLTALAKVAVNLLQTHGLNQQTINLLFTPGLKDYDPIGLKSSCGILSAPSNFPENLNDLSEKMQLVKYLNLKYKNSKYIGVNG----GEKGDPLFKGARVNLDCNV |
2 | 2pffB | 0.06 | 0.05 | 2.40 | 1.61 | MapAlign | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--GG--G--GG--GGGGGGGGGGG--GGGGGGGGG-GGGGGGGGGGGGGG---GG--GG--GG-GGG---GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---GGGGGGGGGG------GGGGGGGGGGGGGGGGGGAAQDVWNRADNHFKDTYGFSILDIVVNLTIHFGGENYSA-MIFETIVDGTEKIFEINHSTSYFRSEKGLLSATQFTQPALTLMEKAAFEDLKSKGLIPADATFAGHSLGEYAAVMSIESLVEVVFYRGMTMQVAVPRDGMIAINPGRVAASFSQEALQYVVERVGKRTGWVEIVNYNVENQQYVAAGDLRALDTVTNVLNFIKLQKIDIIELQKSLSLEEVEGHLFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG------- |
3 | 1vt4I | 0.15 | 0.11 | 3.73 | 1.21 | HHsearch | | ----------------------MDFET----GEHQYQ-YKDILSFVDNFCKDVILSKEEIDHIIMSK-----------DAVSGTLRLFWTLLSKQEEMVQKFVEEVLRIN---YKFLPIKTEQRQPSMMTRMYNDNQVFAKYNVSRLQPYL--------------KLRQALLELRPAKNDVLGSGALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLRSDHSSNIKLRIH--SIQAELRRLLKSKPYENLVLLNVQNAKAWNAFNLSCKILLTTRFK------QVTDFLSAATTTHIS------LDHHSM--------TLTPDEVKSLLLKYLDCRP-------QDLP--------------------REVLTTNPRRLSIIAES-------I-----RDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEPSALIWFDKSDVMVVVNKLH----KYSL-----VEKQPKESTISIPSIY-LELKVKLENEYALRSI---VDHYNPKTFDSDDLIPYLDSHIGHHLKNIEHPERMTLFMVFLDFRFLEQKIRHDSTAWN--------------------------ASGSILNTLQQ-LKFYKPYICDNDPVNAILDFLKIEENLICSKYTDLLRIAL |
4 | 3snhA | 0.08 | 0.07 | 2.87 | 0.90 | CEthreader | | RDFLPRGSGTRRPLVLQLVNATTEYAEFLHCKGKKFTDFEEVRLEIEAETDRVTKGISPVPINLRVYSPHVLNLTLVDLPGMTKPDIEFQIRDMLMQFVTKENCLILAVSPANSDLANSDALKVAKEVDPQGQRTIGVITKLDLMDEGTDARDVLENKLLPLRRGYIGVVNRSQKDIDGKKDITAALAAERKFFLSHPSYRHLAD----RMGTPYLQKVLNQQLTNHIRDTLPGLRNKLQSQLLSIEKEVEEYKNFRPDDPARKTKALLQMVQQFAVDFEK-------RIEGSGGARINRIFHERFPFELVKMEFDEKELRREISYAIKPDMAFETIVKKQVKKIREPCLKCVDMVISELISTVRQCTKKQYPRLREEMERIVTTHIREREGRTKEQVMLLIDIELAYMNTNHEDFIGFANAILVIRKGWLTINNIGISKEYWFVLTAENLSWYKDDEEKEKEYMLSVDNLKLRDVEKSKHIFALFNTEQRNVYKDYRQLELACETQEEVDSWKASFLRAGVYPERVGPQLERQVETIRNLVDSYMAIVNKTVRDLMPKTIMHLMINNTKEFIFSELLANLYSCEESAEQAQRRDEMLRMYHALKEALSIIGDIN----------------------------- |
5 | 6eudA | 0.09 | 0.07 | 2.79 | 0.88 | EigenThreader | | AGKSTWHPGINGKIILLE-------PR-----------RLAARNVAQRLAELLNEKPGDTVGYRMRAQ-----NCVEVVTEG--VLTRMIQRD---------PELGLVILDEFHEQADLALALLLDVQQGLRDDLKLLIMSATVVISRYLPLPAHQRFDDAVAVATAEMLRQEQRVQEQLASRINDQRKAILNIAETSL-----TIEERVARFDP-------------RASMTQRAGRAGEQAERAAAQSEPEILQSD------LSGLLMELLQWGCSDPAQMSWLDQPP-----VVNLLAAKRLLQMLGQKMAALGNDPRLAAMLVSAKNAATAAKIAAILEEPPRMGNSDLGVAFSRQQRSQQLLKRLNVRGG---EADSSLIAPLLAGAFADRN---------GMDANDALSRHEDIDELVQRC-----PQLVAKPSEDELHQAMLNGIRDKG-------------------LSVLNWTAEAEQLRLRLLCAAKWLPEYDWPAVDDESLLAALETWLLPHMTGVHSLRGLKSLDIYQALRGLGMQQRLDSELPAHYTVPTGSHEDNPPG------EATNPTQGRVPLPAQRDLSDFWKG----------AYREVQKEMKGRYPKHVWPDDPANTAPTRRT- |
6 | 5a9q4 | 0.10 | 0.08 | 2.82 | 0.92 | FFAS-3D | | -----------------------SSSTVFDLVEEYENICGSQVNILSKIKFS------------------------KTASMLWLLQQEWRLLASLYRDRIQSAEVVEALFQRDSL---VRQSQLVVDWLE--------------------SIAKDEIGIEYAKSVYWENTLHPIRQKMPLDDLDREDEVRLLKYL---FTLIRAGM------TEEAQRLCKRCGQAWRAATLEGWKLYRRIWKISCWRMAEDELFN------RYERAIYAALSGN-------LKQLLPVCDTEDTVWAYFRVMVDSLVEQEIQTSVATLDETETDLEENQEHYHIVQKFLILGDIWLSRNNLPGHLLRFMTHLILFFRTLGLQTKEEVSIEVLKTYIQLLIREKHT-NLIAFYTCHLPQDLAVEWLVFDPAQRAEALKAEIYLPAEDDNAIREHLCIRAYLEAHETFNEWFKHMNSVPQKPALIPQPTGHLDALTADVKEKMYNVLLFVDGG------------------WMVDVREDAKEDHERTHQMVLLRKCLPMLCFLLSTGQYQECLQLADMVSSERHK-----------------LYLVFSKEELRKLLQKLRE------SSLMLLDQLGYEI--------------- |
7 | 4fyeA | 0.13 | 0.10 | 3.41 | 0.79 | SPARKS-K | | SETIPSDKAKAD-----LF--SSKKSSAAKVEGSLQQFTQAVAKASRSHNRDTLIHRFKAP---NSKEGEEQFIMYIPCRYT--------------KRQQRLSDMIAGTRHSDG----------------------TVTIHHDSFSGPGARMPYSDFKGADDYKKLAIKAVTLINQEPEEYRPPPDAEKARAQLIKLYVEHLS----VTECYTQVVTAGQQKEQFEYVRQMMDAFD------------------GSKAKITIQTTAVGYARMSSWGVNWFRQVG-ALNPLSDNSVTKNQNARFVNQMTDDVIRNLDKVAQNLGD-----YDKAGALHTLLKGPDVENALKEVKGAYREALFSYFEEYQKGEGKWDQAKLDQLKNQVDGYEKSIKKQESAIYELHNQIDALRKAYYTEHKLQELKEQISPVIQNKETDPETKSRLQHFYNSCAYLTQAQELYYENTWHHG----------KNNFKLQTLMASLSCELDYKS------------------------------------NNDRGQRLAQKIVGNALWTAMSEDGLYTGEFLDHRRTHGKEVS----------NVEQLDRELTTIQALHHTANTSGGKNGLFGKVANFAKIK---------------- |
8 | 2qmrA | 0.08 | 0.06 | 2.30 | 0.96 | CNFpred | | ------------------------------SAAALDVLADELLPHILPLLKELLFHH-EWVVKES--------GILVLGAIAEGCMQGMYLPELIPHLIQCLSDKKAL-----VRSITCWTLSRYAHWVVSQ-----------------------------PPDTYLKPLMTELLKRILD---NKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSKYQKNLLILYDAIGTL-MLMPPLIQKWNMLKDEDKDLFPLLECLSSVATALQSGFLP-------------YCEPVYQRCVNLVQKTLAQAMLNNAQPDQYEAPDKDFMIVALDLLSGLAEG--LGGNIEQLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPILGTNLNPEFISVCNNATWAIGEISIQMGIEMQP------------YIPMVLHQLVEIINRP---------------NTPKLLENTAITIGRLGYV-----------------------------------CPQEVAPMLQQFIRPWCTSLRNIRD-----------------------------------NEEKDSAFRGICTMISVNPSGVQDFIFFCDAVSWINPKDDLRDMFCKILHG |
9 | 6vr4A | 0.06 | 0.04 | 1.53 | 0.67 | DEthreader | | GLGLQGGDL----AF---------------------------------------------------------------D----LHV--E------S--K----------------------DEQKKTEFVQ-AF-YLSKIN-------------------------VSNANNPINIENNNES----------NTFKNNPGVLRQLLNTSYGQS---VTGDKIVNAFTDHFVSEVNAKSGHILSELSFITDDNELK-L---------------------YNEDGSPINP-----KG-AV-SNEQKILIKQTINKVLNQRIKENIRYFKDQGLVIDTV-NKD--GNKG----------------DIQLTEFDISHVVSDFTLNSILA---------------------------LVNNTGATLNPLTLSNADW-KLQQD-LP--VK---PTLLGSQIQKNIYSSLGSGFQAINDTVALKTNGIGYRIPNQGQSS-D---IDFPHVKDEIKRVFGDNSK---------------------VDNAKDPYINDG-NFNTYTSSVAF--------------------E-ADFTQRYE--------LNESVQLSRILHFKYHNNKITSLGTQVKNTLLDQNLLTNPADILN |
10 | 1vt4I3 | 0.05 | 0.03 | 1.48 | 1.34 | MapAlign | | LEQKIRHDSTAWNASGFYKPYICDNDPKYERLVNAILDFLPKGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--------GGGGGGGGGGGGGGGGGGGGG---GGGGGGGGGGG-GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-------GG------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--------------------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG----GGGGGGGGGGGGGGGGGGGGGGGG------------------------------------------------------------------------------------------GGGGGGGGGGGGGGGG------------------------------------------------------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--GGGGGGGGGGGGGGGGGGGGGGGG---------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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