Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| SS Seq | CCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHSSSSSSCCCSSSCCCCCSSSSSSSCCCCCCCCCHHHHHHHHHHHHCCCSSSCCCCCCHHHHHHHHHHHHHHHHCCSSSSSSCCCCSSSSSSCCCSSSSSSSCCCCSSSSSSSHHHHHHCCCCCCCSSSSSCCSSSSSSCCCCSSSSSSSSCCCCCCCCCCCHHHHHCCCCCSSSSSCCCC MRREFCWDAYSKAAGSRASSPLPRQDRDSFCHQMSFCLTELHLWSLKNTLHIADRDIGIYQYYDKKDPPATEHGNLEKKQKLAESRDYPWTLKNRRPEKLRDSLKELEELMQNSRCVLSKWKNKYVCQLLFGSGVLVSLSLSGPQLEKVVIDRSLVGKLISDTISDALLTDSFIILSFLAQNKLCFIQFTKKMESSDVNKRLEKLSALDYKIFYYEIPGP |
1 | 6jp6A3 | 0.08 | 0.07 | 2.72 | 0.69 | CEthreader | | ------------SLDDIAKQCGDIFEKNESIKGFQWFSFGVIAITSLGKILKYSDVKLLLTNEKFNSYPITNGIQTQNIAVFSNNKSDILLIKFSKDSADIIETEEFHDELSKTNNCLVTEYDDDSFLLTLQSEKFVCLEISLQNLKIKSKHC--FNKPENFSSSCLTSFRNHILVGSR---FSTLVIYN--------LLDESEEPFIIRRLSPGDTT-- |
2 | 5cwwB | 0.08 | 0.07 | 2.90 | 0.88 | EigenThreader | | ADRWTFDAKKLADATYLDQDFGVSTSATNKGFSPDAFDMEVAAACFPTRDSGGWAPMLAMTYALCPLSTPEERLVAQQQLEWMSEIDNQEPFNPEDEQ------------DDEVELKDIVIGELNIICLLSTSGQVKICLDIDPPSLLTFDTLKPAEVTPDGWPMFSEDATSPYFYVTHP-AGITYISLTPSDSEAGTEFRIDLLAKGQSERDIFTQTRT |
3 | 4rckA | 0.09 | 0.07 | 2.59 | 0.41 | FFAS-3D | | --RDLVVD----LSGSAEEDKTSNGDFVDRLTAVKQVVSDF-------IDQRKGDRLGLVLFGDHAYLQTPLTFDRNTVREQLDRTVLNLVGQRTA---IGEGLGLATKTFIESN-------APQRTIILLSDGKIYTVGIGAGEQVRGFLDEDTLTKIAT------------------TGGQYFRA-----RNADELAEIYQTIDALEP---------- |
4 | 5y4gA | 0.10 | 0.09 | 3.22 | 0.59 | SPARKS-K | | TIVNRIRTDVVNVAKSF-GAEYSEAVIDQIFQGFGEKFTNFAIRVQNKR---NQKVDCNIRYGEAKENSDQGHPVDTLIQEMFQAIPAIWHLPKIVPEEAFKSVNAHIDFFKKYCALTVDYR-NKSTNLYFDACPEIAVTFNSPGIERMCFYTKFAQEAPALLDNPGF----LVGWSFKGTYIKIDVDYH--------GLVVPSFFHMHNLPL------- |
5 | 3f1vA | 0.12 | 0.08 | 2.89 | 0.77 | CNFpred | | -----------------------------GVIELMRML-PLRVQIGSNNIRAH---VGDFIFTSKL-----DGRFPDYRRVLPKNPDKHLEAG---CDLLKQAFARAAILSNKFRGVRLYVSE-NQLKITANAEEILDVTYSGAEMEIGFNVSYVLDVLN-ENVRMMLTDSSSVQIEDAASQSAAYVVMPMRL--------------------------- |
6 | 7bwmA | 0.07 | 0.06 | 2.47 | 0.83 | DEthreader | | --N----R-NSAKGIT--ASTTFALDVPVEVLLIGNLFGGNS-FLPFYVPRM---GALAGIMNKLTQPLSNWSHFSPTLS--R----F-S---NLVGSLNAQRAQLFLRGLSAWTDVGNLVVSTTVSFQLG---GWLVTFTDFVPLGLQLTGLDAQRALIWAPWAFRGSWVRESVWDLKGVAPQSLKTTTPVF-GTSSGVVGVGRLSESAAKMNDDVDG- |
7 | 1vt4I | 0.04 | 0.03 | 1.74 | 0.87 | MapAlign | | ---GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---G--GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--------------GGG---GGGGGGGGGGG |
8 | 2p1oB2 | 0.12 | 0.11 | 3.99 | 0.41 | MUSTER | | VLDYIEDAGLEVLASTFPSEPFVMEPNVALTEQGLVSVSMVLYFCRQAALTIARTRFRLCIIEPKAPDYLTLEPLDIGFGAIVE------HCKD---RRLDKVFEYIGTYAKKMEMLSVAFSDLGMHHVLSGCDSLRKLEIRDCPFGDKAL-LANASKLET-WMSSCSVSFGACLGQKMPKLNVEVIDERGAPDSRPESCPVERV------FIYRTVAGP |
9 | 1xipA1 | 0.10 | 0.04 | 1.53 | 0.48 | HHsearch | | -----------------------------------------------------------------------------------------------------------------KPVFQLKN-VNNTLVILNSVNDLSALDLRTKSTK-----------QLAQNVTSFDVTNSQLAVLLKD-RSFQSFAWREEFSLPSEEYSPLSVTILSPQDFLAVFGNV |
10 | 6xzlA | 0.05 | 0.05 | 2.33 | 0.69 | CEthreader | | TMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGTYGWSYGQLGHGDLEDHLIPHLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNFGQVGVLDQCSPVQVRFPDDQVVQVSCGWRHTLAVTERNN----VFAWGRGTNGQLGIGESVDRNFPKIIEALSVDG- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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