>O95835 (373 residues) GIGAFGEVCLARKVDTKALYATKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYS FQDKDNLYFVMDYIPGGDMMSLLIRMGIFPESLARFYIAELTCAVESVHKMGFIHRDIKP DNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHPRQDSMDFSNEWGDPSSCRCGDRL KPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILFEMLVGQPPFL AQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLCRGPEDRLGKNGADEIKAHPFFK TIDFSSDLRQQSASYIPKITHPTDTSNFDPVDPDKLWSDDNEEENVNDTLNGWYKNGKHP EHAFYEFTFRRFF |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | GIGAFGEVCLARKVDTKALYATKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFPESLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHPRQDSMDFSNEWGDPSSCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILFEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLCRGPEDRLGKNGADEIKAHPFFKTIDFSSDLRQQSASYIPKITHPTDTSNFDPVDPDKLWSDDNEEENVNDTLNGWYKNGKHPEHAFYEFTFRRFF |
Prediction | CCCCCSSSSSSSSCCCCCSSSSSSSCHHHHHHHHHHHHHHHHHHHHHHCCCCCSCCSSSSSSCCCSSSSSSSCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCSCCCCCHHHSSSCCCCCSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHCCCCCCHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCSSCCCC |
Confidence | 9466569999999489958999984199999883799999999999976999563357899669947999825788079999986398986899999999999999999819651478823468769997898047666565545664201233443334445566677764445554222034554432244333443225355670554268998541303454567875179899999998999999970864379999777899999999997258421478999899971966589997788872899977889995400137998755566667666531221145455676656675775221579 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | GIGAFGEVCLARKVDTKALYATKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFPESLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHPRQDSMDFSNEWGDPSSCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILFEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLCRGPEDRLGKNGADEIKAHPFFKTIDFSSDLRQQSASYIPKITHPTDTSNFDPVDPDKLWSDDNEEENVNDTLNGWYKNGKHPEHAFYEFTFRRFF |
Prediction | 8620203010023262530000000316301545215103202400431612000301000106610000000000000010045363051620000000000001000632000000102000014700000000000241444544432544433445245354434444444444434444324243254334431100142011511475514310000000000000000210031633540152026254505126536016201300430044265313442061026131047040551147350213050637500320273457533554545763464255344446445210101013235 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCCCSSSSSSSSCCCCCSSSSSSSCHHHHHHHHHHHHHHHHHHHHHHCCCCCSCCSSSSSSCCCSSSSSSSCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCSCCCCCHHHSSSCCCCCSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHCCCCCCHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCSSCCCC GIGAFGEVCLARKVDTKALYATKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFPESLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHPRQDSMDFSNEWGDPSSCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILFEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLCRGPEDRLGKNGADEIKAHPFFKTIDFSSDLRQQSASYIPKITHPTDTSNFDPVDPDKLWSDDNEEENVNDTLNGWYKNGKHPEHAFYEFTFRRFF | |||||||||||||||||||
1 | 2f2uA | 0.45 | 0.35 | 10.10 | 1.17 | DEthreader | GRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNY-DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKM-DE--------------------------------------------TG-MVHCDTAVGTPDYISPEVLKSGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPEDAEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKNQWNWDNIRETAAPVVPELSSDIDSSNFDDIE----------------------------------------- | |||||||||||||
2 | 6bxiA | 0.49 | 0.42 | 12.07 | 2.05 | SPARKS-K | GRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKRTEFYRNLNHSLPSDFTFQNMN---------------SKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLTFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKSNSFFEGVDWE-HIRERPAAISIEIKSIDDTSNFDEFP----------------------------------------- | |||||||||||||
3 | 6pjxA | 0.31 | 0.25 | 7.69 | 0.50 | MapAlign | GKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMNGGDLKFHIYGNPGFEEERALFYAAEILCGLEDLHHENTVYRDLKPENILLDDYGHIRISDLGLAVKIPE------------------------------------------------GDLIRGRVGTVGYMAPEVLNNQRYGLSPDYWGLGCLIYEMIEGQSPFRGVKREEVDRRVL--ETEEVYS--HKFSEEAKSICKMLLTKAKQRLGCEEAAEVKRHPFFRNMNFKR-LEMLDPPFVPDP----RAVYCKSIPWQNEMIETECFKELNVFGPNGTLPPDLN------------- | |||||||||||||
4 | 3tkuA | 0.41 | 0.34 | 9.94 | 0.36 | CEthreader | GRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMND----------------------------------------------DGTVQSSVAVGTPDYISPEILQAGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSVTDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGLNWE-NIRNLEAPYIPDVSSPSDTSNFDVSGLHLPFIGFTFTTESCFSDRGSL------------------- | |||||||||||||
5 | 6bxiA | 0.50 | 0.43 | 12.36 | 1.72 | MUSTER | GRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNM------------NSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLTFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKSNSFFEGVDWEH-IRERPAAISIEIKSIDDTSNFDEFP----------------------------------------- | |||||||||||||
6 | 3pfqA | 0.35 | 0.29 | 8.57 | 0.85 | HHsearch | GKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD------------------------------------------------GVTTKFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH--NVAYPKS--MSKEAVAICKGLMTHPGKRLGCEGERDIKEHAFFRYIDWE-KLERIQPPYKPKASGR-NAENFDRFFTRHPPVLPP-----D---Q-E-VIRNIDQSEFEGFFVNSEF | |||||||||||||
7 | 6bxiA | 0.50 | 0.42 | 12.29 | 3.33 | FFAS-3D | GRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQN------------MNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLTFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKSNSFFEGVDWEHIRER-PAAISIEIKSIDDTSNFDEFP----------------------------------------- | |||||||||||||
8 | 1cdkA | 0.38 | 0.30 | 8.82 | 0.72 | EigenThreader | GTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRK----------------------------------------------------GRTWLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQDLTKRFGNLGVNDIKNHK--WFATTDWIAIYQRAPFIPKFKGPGDTSNFDDYEE------------EEIRVSINEKCGKEFSEF---------- | |||||||||||||
9 | 6bxiA | 0.50 | 0.43 | 12.36 | 3.00 | CNFpred | GRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNM------------NSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLTFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKSNSFFEGVDWE-HIRERPAAISIEIKSIDDTSNFDEFP----------------------------------------- | |||||||||||||
10 | 6c0tA | 0.35 | 0.26 | 7.85 | 1.17 | DEthreader | GVGGFGRVELVQLKSEEKTFAMKILKKRHIVDTRQQEHIRSEKQIMQGAHSDFIVRLYRTFKDSKYLYMLMEACLGGELWTILRDRGSFEDSTTRFYTACVVEAFAYLHSKGIIYRDLKPENLILDHRGYAKLVDFGFAKKIGF----------------------------------------------G--KKTW-FCGTPEYVAPEIILNKGHDISADYWSLGILMYELLTGSPPFSGPDPMKTYNIILRGIDMIEFPK-K-IAKNAANLIKKLCRDPSERLGNNGVKDIQKHKWFEGFNWEGLRKGLTPPIIPSVASPTDTSNFDSFP----------------------------------------- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |