>O95831 (235 residues) QKKAALSASEGEEVPQDKAPSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELP YMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQPPSFYVSAQDLPHIENGGVAVLT GKKVVQLDVRDNMVKLNDGSQITYEKCLIATGGTPLEPNVELAKTGGLEIDSDFGGFRVN AELQARSNIWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMTGAAKPYWHQ |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | QKKAALSASEGEEVPQDKAPSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQPPSFYVSAQDLPHIENGGVAVLTGKKVVQLDVRDNMVKLNDGSQITYEKCLIATGGTPLEPNVELAKTGGLEIDSDFGGFRVNAELQARSNIWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMTGAAKPYWHQ |
Prediction | CCCCCCCCCCCCCCCHHHCCCCCCSSSSCCCHHHHHHHHHHHHHCCCCCSSSSSCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHCHHHHHHHHCCCSSSCCCSSSSSSCCCCSSSSCCCCSSSCCSSSSSCCCCCCCCCCCCCCCCCSSSCCCCCHHHHHHHCCCCCSSSSSCCCCCCHHHHHCCSSSSCHHHHHHHHHHHHHHHCCCCCCCCCC |
Confidence | 9865555432211115452468939998894999999999996199982999938999999887576888548764211112211134422333147867753100112477719199779779999779989997899899818799931786667899865677589825656477876336698099973752110233165577445899999999999961999898889 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | QKKAALSASEGEEVPQDKAPSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQPPSFYVSAQDLPHIENGGVAVLTGKKVVQLDVRDNMVKLNDGSQITYEKCLIATGGTPLEPNVELAKTGGLEIDSDFGGFRVNAELQARSNIWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMTGAAKPYWHQ |
Prediction | 8565535465545345762475251042422300120032117543704000004163321620200321034544543441424434444440203244113445435315634030224340340237623040554440403200000113023151514523302013323012024305636533021201122113222220212410340021003100456441427 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCCCCCCCCCCCCCHHHCCCCCCSSSSCCCHHHHHHHHHHHHHCCCCCSSSSSCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHCHHHHHHHHCCCSSSCCCSSSSSSCCCCSSSSCCCCSSSCCSSSSSCCCCCCCCCCCCCCCCCSSSCCCCCHHHHHHHCCCCCSSSSSCCCCCCHHHHHCCSSSSCHHHHHHHHHHHHHHHCCCCCCCCCC QKKAALSASEGEEVPQDKAPSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQPPSFYVSAQDLPHIENGGVAVLTGKKVVQLDVRDNMVKLNDGSQITYEKCLIATGGTPLEPNVELAKTGGLEIDSDFGGFRVNAELQARSNIWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMTGAAKPYWHQ | |||||||||||||||||||
1 | 1gv4A | 0.85 | 0.71 | 20.14 | 1.17 | DEthreader | ---------------------HVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSK--------------ELWFSDDPTLFRQWKERSIYFQ--PPSFYVIGGVAVLTGKKVVHLDVRGNMVKLNDGSQITFEKCLIATGGTPLEPNVELAKTGGLEIDSDFGGFRVNAELQARSNIWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMTGAAKPYWHQ | |||||||||||||
2 | 1gv4A1 | 0.95 | 0.89 | 24.94 | 1.96 | SPARKS-K | ------------TVPQIRAPSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLQFRQWNGKERSIYFQPPSFYVSAQDLPNIENGGVAVLTGKKVVHLDVRGNMVKLNDGSQITFEKCLIATGGTL-EPNVELAKTGGLEIDSDFGGFRVNAELQARSNIWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMTGAAKPY--- | |||||||||||||
3 | 6pfzD | 0.26 | 0.21 | 6.44 | 0.39 | MapAlign | ----------------------MNVVVIGGGAAGLKAASRIRRKDGDASITVVEAGKYVSLGR------------------CGLPYYVGGLVHEVLRETTVR----DEAYFKKKNIDVLTETVATEIDRSRKTVKIVREDELNYDYLVIATGARGIKPNSELAEKAGLKIG-ETGAIWVDEYMRTDESIYAGGDCVETTCLVTGKKIAPFGDVANKQGRVIGENITGGRAVFPGV | |||||||||||||
4 | 6pfzD2 | 0.25 | 0.21 | 6.45 | 0.34 | CEthreader | ----------------------MNVVVIGGGAAGLKAASRIRRKDGDASITVVEAGKYVS--LGRCGLPYYVGGLVHEVDNLRE-----------------TTVRDEAYFKKLKNIDVLTETVATEIDRSRKTVKIVREDELNYDYLVIATGARPIKPNSELAEKAGLKIGE-TGAIWVDEYMRTDESIYAGGDCVETTCLVTGKKIIPFGDVANKQGRVIGENITGGRAVFPGV | |||||||||||||
5 | 1gv4A1 | 0.96 | 0.89 | 25.06 | 1.66 | MUSTER | ------------TVPQIRAPSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLQFRQWNGKERSIYFQPPSFYVSAQDLPNIENGGVAVLTGKKVVHLDVRGNMVKLNDGSQITFEKCLIATGGT-LEPNVELAKTGGLEIDSDFGGFRVNAELQARSNIWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMTGAAKPY--- | |||||||||||||
6 | 1gv4A1 | 0.96 | 0.89 | 25.06 | 0.79 | HHsearch | ------------TVPQIRAPSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLQFRQWNGKERSIYFQPPSFYVSAQDLPNIENGGVAVLTGKKVVHLDVRGNMVKLNDGSQITFEKCLIATGGT-LEPNVELAKTGGLEIDSDFGGFRVNAELQARSNIWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMTGAAKPY--- | |||||||||||||
7 | 1gv4A1 | 0.94 | 0.86 | 24.24 | 2.07 | FFAS-3D | ---------------QIRAPSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLQFRQWNGKERSIYFQPPSFYVSAQDLPNIENGGVAVLTGKKVVHLDVRGNMVKLNDGSQITFEKCLIATGGTLEPNV-ELAKTGGLEIDSDFGGFRVNAELQARSNIWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMTGAAKPY--- | |||||||||||||
8 | 1gv4A1 | 0.84 | 0.75 | 21.11 | 0.60 | EigenThreader | ---------------TVPQIRAPSFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRELWFS-----DDPNVTKTLQFRQWNGKERSIYFQPPSFYVSAQDLPNIENGGVAVLTGKKVVHLDVRGNMVKLNDGSQITFEKCLIATGGTL-EPNVELAKTGGLEIDSDFGGFRVNAELQARSNIWVAGDAACFYDI--KLGRRRVHDHAVVSGRLAGENMT--GAAKPY- | |||||||||||||
9 | 5fmhA | 0.56 | 0.41 | 11.89 | 2.59 | CNFpred | -----------------------SITIIGGGFLGSELACALGRKALGTEVIQLFPEKGNMGK--ILPEYLSNW---------------------------------TMEKVRREGVKVMPNAIVQSVGVSKLLIKLKDGRKVETDHIVAAVGLEP---NVKLAKTGGLEIDSDFGGFRVNAELQARSNIWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMTGAAKPYWHQ | |||||||||||||
10 | 1gv4A1 | 0.84 | 0.69 | 19.44 | 1.17 | DEthreader | ---------------------HVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSK--------------ELWFSDDPTLFRQWKERSIYFQ--PPSFYVIGGVAVLTGKKVVHLDVRGNMVKLNDGSQITFEKCLIATGGTLE-PNVELAKTGGLEIDSDFGGFRVNAELQARSNIWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMTGAAKPY--- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |