>O95822 (133 residues) GFTKWLLGLLNSQTKEHGRNELFTDSECKEISEITGGPINETLKLLLSSSEWVQSEKLVR ALQTPLMRLCAWYLYGEKHRGYALNPVANFHLQNGAFLEETGPNSTSYLGSKIIKASEQV LSLVAQFQKNSKL |
Sequence |
20 40 60 80 100 120 | | | | | | GFTKWLLGLLNSQTKEHGRNELFTDSECKEISEITGGPINETLKLLLSSSEWVQSEKLVRALQTPLMRLCAWYLYGEKHRGYALNPVANFHLQNGAFLEETGPNSTSYLGSKIIKASEQVLSLVAQFQKNSKL |
Prediction | CHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCSSCCCCCCCSSSSCCCHHHHHHCCCCHHHHHHHHHHHHHSHHCCCC |
Confidence | 8278999997631323354122389999999973178616999998428510037678999999999999999998550898889821203568704333021133441168989999886666530003589 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 | | | | | | GFTKWLLGLLNSQTKEHGRNELFTDSECKEISEITGGPINETLKLLLSSSEWVQSEKLVRALQTPLMRLCAWYLYGEKHRGYALNPVANFHLQNGAFLEETGPNSTSYLGSKIIKASEQVLSLVAQFQKNSKL |
Prediction | 8225103631555256664452145631540471475643530451164661363761264045102300031014135763321101433253113035335422322344345014302200111344578 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 | | | | | | | |||||||||||||
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SS Seq | CHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCSSCCCCCCCSSSSCCCHHHHHHCCCCHHHHHHHHHHHHHSHHCCCC GFTKWLLGLLNSQTKEHGRNELFTDSECKEISEITGGPINETLKLLLSSSEWVQSEKLVRALQTPLMRLCAWYLYGEKHRGYALNPVANFHLQNGAFLEETGPNSTSYLGSKIIKASEQVLSLVAQFQKNSKL | |||||||||||||||||||
1 | 4ksaA2 | 0.21 | 0.17 | 5.50 | 1.00 | DEthreader | PV-PGFAKWLKRERDNP-DSTLLDASART-AL------E--ALDTP--N-WF-DDADTADRLKPIVLQLAAAYFLQAKGNGRPLDPVARFHLGARYLYADIEANHEALFERGQIAAASAVRKLV--P------ | |||||||||||||
2 | 4ksaA2 | 0.30 | 0.24 | 7.30 | 1.33 | SPARKS-K | GFAKWLKRERDNP-----DSTLLDA-------------SARTALEALDTPNWFDDADTADRLKPIVLQLAAAYFLQAKGPGRPLDPVARFHLGNGARLGDIEANHEALFERGQIAAASAVRKLVP-------- | |||||||||||||
3 | 4ks9A3 | 0.19 | 0.17 | 5.35 | 0.92 | MapAlign | PI-PGFADWLRKRDGE-SIDRVLGVKRLARWREQHGE-VPADGAAWFS--ALSADTED-TVIRDTAMTLAAHYLVREGGKGVPADPVARFHLGACVVPDALDDNLARLG-DGNPRISRAVAKLL--------- | |||||||||||||
4 | 4ks9A3 | 0.24 | 0.20 | 6.32 | 1.03 | CEthreader | GFADWLRK-----RDGESIDRVLGVKRLARWREQHVPADGAAWFSALSADT------EDTVIRDTAMTLAAHYLVREGGKGVPADPVARFHLGNGAVPDALDDNLARLGD-GNPRISRAVAKLL--------- | |||||||||||||
5 | 4ks9A3 | 0.22 | 0.20 | 6.17 | 1.06 | MUSTER | GFADWLRKRDGE-----SIDRVLGVKRLARWREQHGEVPADGAAWFSALSADTED----TVIRDTAMTLAAHYLVREGGKGVPADPVARFHLGNGACVERV-----NWGADMSRKGRAQSCGMMVNYLYVPDA | |||||||||||||
6 | 2ygwA | 0.98 | 0.74 | 20.65 | 3.71 | HHsearch | GFTKWLLGLLNNE----------------------------TLKLLLSSSEWVQSEKLVRALQTPLMRLCAWYLYGEKHRGYALNPVANFHLQNGAFLEETGPNSTSYLGSKIIKASEQVLSLVAQFQ----- | |||||||||||||
7 | 4ks9A3 | 0.21 | 0.19 | 5.96 | 1.72 | FFAS-3D | GFADWLRKRDGES-----IDRVLGVKRLARWREQHGEVPADGAAWF----SALSADTEDTVIRDTAMTLAAHYLVREGGKGVPADPVARFHLGNGACVER-----VNWGADMSRKGRAQSCGMMVNYLYVPD- | |||||||||||||
8 | 4ks9A3 | 0.17 | 0.15 | 4.94 | 0.95 | EigenThreader | SPIPGFADWLRKRD-GESIDRVLGVKRLARWREQHGEVPADGAAWFSA--LSAD---TEDVIRDTAMTLAAHYLVREGGKGVPADPVARFHLGGADMSDALDDNLARLGD-GNPRISRAVAKLL--------- | |||||||||||||
9 | 4f0xA | 0.99 | 0.99 | 27.80 | 1.35 | CNFpred | GFTKWLLGLLNSQTKEHGRNELFTDSECKEISEITGGPINETLKLLLSSSEWVQSEKLVRALQTPLMRLCAWYLYGEKHRGYALNPVANFHLQNGAVLEETGPNSTSYLGSKIIKASEQVLSLVAQFQKNSKL | |||||||||||||
10 | 4ksaA | 0.21 | 0.17 | 5.50 | 1.00 | DEthreader | PV-PGFAKWLKRERDNP-DSTLLDASART-AL------E--ALDTP--N-WF-DDADTADRLKPIVLQLAAAYFLQAKGNGRPLDPVARFHLGARYLYADIEANHEALFERGQIAAASAVRKLV--P------ | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |