>O95819 (88 residues) YMQRPSTEQLLKHPFIRDQPNERQVRIQLKDHIDRTRKKRGEKDETEYEYSGSEEEEEEV PEQEGEPSSIVNVPGESTLRRDFLRLQQ |
Sequence |
20 40 60 80 | | | | YMQRPSTEQLLKHPFIRDQPNERQVRIQLKDHIDRTRKKRGEKDETEYEYSGSEEEEEEVPEQEGEPSSIVNVPGESTLRRDFLRLQQ |
Prediction | CCCCCCHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC |
Confidence | 9989878898628454049727899999999999998741455553112356532111233346998763468983068999999719 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 | | | | YMQRPSTEQLLKHPFIRDQPNERQVRIQLKDHIDRTRKKRGEKDETEYEYSGSEEEEEEVPEQEGEPSSIVNVPGESTLRRDFLRLQQ |
Prediction | 8564343641262521574455440333045224534555456765535454465556645687354443362466431354245358 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 | | | | | |||||||||||||
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SS Seq | CCCCCCHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC YMQRPSTEQLLKHPFIRDQPNERQVRIQLKDHIDRTRKKRGEKDETEYEYSGSEEEEEEVPEQEGEPSSIVNVPGESTLRRDFLRLQQ | |||||||||||||||||||
1 | 3lxzA2 | 0.05 | 0.05 | 2.23 | 0.54 | CEthreader | IELYIELPARTCYAESFFGSVEPLIKEKARADLLAGFATLKNGRFAPYVAGEQLTLADLFCFSVDLANAVGKKVLNIDFLADFPQAKA | |||||||||||||
2 | 3jacA | 0.05 | 0.05 | 2.23 | 0.55 | EigenThreader | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
3 | 2x7fA2 | 0.92 | 0.40 | 11.17 | 0.62 | FFAS-3D | --QRPATEQLMKHPFIRDQPNERQVRIQLKDHIDRTKKKR------------------------------------------------ | |||||||||||||
4 | 6ao5A | 0.22 | 0.20 | 6.44 | 0.90 | SPARKS-K | PEQRATATQLLQHPFIKNAKPVSILRDLITEAMEIKAKRHEEQQREL-------EEEENWKVPQDGDFDFLKNLSLEELQMRLKALDP | |||||||||||||
5 | 2x7fA | 0.88 | 0.40 | 11.19 | 0.81 | CNFpred | HSQRPATEQLMKHPFIRDQPNERQVRIQLKDHIDRTKKKR------------------------------------------------ | |||||||||||||
6 | 6pooA | 0.06 | 0.06 | 2.42 | 1.00 | DEthreader | SDQKDILVKSISS--SK----DSQLILKFVTQATQLNNAESTKKQVDEFVAEAKKNNELQALIKAVAQKLQAKIEILDKKLDE--K-- | |||||||||||||
7 | 3wg9A | 0.12 | 0.12 | 4.38 | 1.00 | MapAlign | PRYHRYLEELLSRELSEKMVTASQIRQDVEELYNNLTKILGLDKTYNTIIIGAGNLGQAIANYTSFEKSGFNLKGIFDIVEVMDVETV | |||||||||||||
8 | 6ao5A | 0.20 | 0.20 | 6.52 | 0.78 | MUSTER | PEQRATATQLLQHPFIKNAKPVSILRDLITEAMEIKAKRHEEQEEEENWKVPQDGDFDFLKNLSLEELQMRLKALDPMMEREIEELRQ | |||||||||||||
9 | 2x7fA | 0.88 | 0.40 | 11.19 | 1.41 | HHsearch | HSQRPATEQLMKHPFIRDQPNERQVRIQLKDHIDRTKKKR------------------------------------------------ | |||||||||||||
10 | 5a2tA | 0.06 | 0.06 | 2.53 | 0.54 | CEthreader | EAFDRGSSEATTWDGITEGVEHRAAANAIKEAIHKVTYYLAKPTFAIRQSKNLPPANFAKKNVPSQYKWCAFDAFDGLYDPTCLASEL | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |