Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500
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| SS Seq | CCCCCHHHHHHHHHHCCCCCCCCCCCSSSCCCCSSSSSSHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHSSSSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCC GYLFPATVVGVSAAIDYKSYGTEKACWLHVDNYFIWSFIGPVTFIILLNIIFLVITLCKMVKHSNTLKPDSSRLENIKSWVLGAFALLCLLGLTWSFGLLFINEETIVMAYLFTIFNAFQGVFIFIFHCALQKKVRKEYGKCFRHSYCCGGLPTESPHSSVKASTTRTSARYSSGTQSRIRRMWNDTVRKQSESSFISGDINSTSTLNQGMTGNYLLTNPLLRPHGTNNPYNTLLAETVVCNAPSAPVFNSPGHSLNNARDTSAMDTLPLNGNFNNSYSLHKGDYNDSVQVVDCGLSLNDTAFEKMIISELVHNNLRGSSKTHNLELTLPVKPVIGGSSSEDDAIVADASSLMHSDNPGLELHHKELEAPLIPQRTHSLLYQPQKKVKSEGTDSYVSQLTAEAEDHLQSPNRDSLYTSMPNLRDSPYPESSPDMEEDLSPSRRSENEDIYYKSMPNLGAGHQLQMCYQISRGNSDGYIIPINKEGCIPEGDVREGQMQLVTSL |
1 | 5ee7A | 0.21 | 0.06 | 1.89 | 1.01 | FFAS-3D | | GWGAPALFVVPWAVV--KCLFENVQCWT--NMGFWWILRFPVFLAILINFFIFVRIVQLLVAKLRARQMHHT--DYAFRLAKSTLTLIPLLGVHFVVFAFVTDEHRSAKLFFDLALSSFQGLLVAVLYCFLNKEVQSELRRRWHRA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
2 | 4btgA | 0.11 | 0.10 | 3.68 | 1.08 | SPARKS-K | | RGLTQAFAIGESVGALQLPLQFTRTFSASMTSELLWEVIDPYARLFFQYAQALVNQFTEYHQSTRAIKADAVPPTAILEQLRHHITTDFVCHVLSPLGATYPNFYALVDCVRASDLRMLTALSALISQHLANA---------------ATTAFERSRGNF-------DANAVVSSVLTILGRLWSPSTPKELDPSLRNTNGIDQLRSNLALFIAYVKQRGRAEVSSTIIPFIEAMSEVSPFKLRPINETTSYIGQTSAIDHMGQPSHVVVYEDWQFAKEITAFTPVKLANNSNQRFLDVEPG-----ISDRMSATLAPIGNTFAAVYEAVSQRGTVNSNGAEMDYALDRDPVDESLEARASNDLKRSMFNYYAAVMHYAVAHNPEQGVAAEQGSLYLVWNVRTELRIPVGYNGSIRTPEPLEAIAYNKPIQPSEVLQAKVLDLANHTTIHIWPWHEASTEFAYEDAYSVTIRNKR-YTAEVKEFELLGLGQRRERVRILKPTV |
3 | 6fj3A | 0.22 | 0.07 | 2.06 | 2.76 | HHsearch | | GWGLPAIFVAVWVSVRATLANT--GCWDLSSGNNKWIIQVPILASIVLNFILFINIVRVLATKGIDSKKRSDTRQQYRKLAKSTLVLMPLFGVHYIVFMLTPYTEVQVRMHYEMLFNSFQGFFVAIAYCFCNGEVQAEIKKSWSRWTLA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
4 | 1mhsA | 0.10 | 0.10 | 3.62 | 0.34 | CEthreader | | GTIIPADGRIVTDDAFLQTGESLAVDKHKGDQVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVWVSSFYRSNPIVQILEFTLAITIIGVPVGLPAVVTTTMAVGAAYLAKKKAIVQKLSAIESLAGYTVAGVDPEDLMLTACLAASRKKKGIDAIDKAFLKSLKYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKRGEGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGGGDMPGSEVYDFVEAADG--FAEVFPQHKYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAVEGSSDAAR-SAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVYRIALSIHLEIFLGLWIAILNRSLNIELVVFIAIFADVATL |
5 | 5me3A | 0.06 | 0.06 | 2.49 | 0.57 | EigenThreader | | ----RMKNIG------------KNLHITHFSYIMLSILQFDQFVTDMTTVVDLILARLLKKLLSIFKHINIESVALQGIGLIGSTILDIRLSLKLVLSLLERHKVKLRSGAIRCLALLISKDLYTPIVKETIENRLTDLVKDAILELIELGSSYIDFYQHININYNDDSMLVRKHVLRMNQIIYDDTKAYVASRILRRIEDEEDVIIETARSELLKRWILSIQCPNAKPELQIKNCRVSIRVIAQLLVGGDKICDLFEHFLIFYVLNKNAHTEDQNKLISSSLCLLTDQVIEMVIENEEEGRNIMKFLSVLSS---CQDSFITKDHITALYPYLHSDSDFQLHILKVYRNTFEQLSHFKPKFLYDLETTILSRL------------PRMNVRELDEAIPLSWSLSRHRKDDTRICKACASCLGQLSPYIANATTDPRPDGKLQRLLYLATGFARFCSFENNLKT----RENIFEYVTKCLLMFTENIHHVIRRIATKNLVKIA |
6 | 4k5yA | 0.25 | 0.06 | 1.97 | 0.99 | FFAS-3D | | GWGVPFPIIVAWAIG--KLYYDNEKCWAGKRPYTDYIYQGPMALVLLINFIFLFNIVRILMTKLR--ASTTSETIQARKAVKATLVLLPLLGITYMLAFV-NEVSRVVFIYFNAFLESFQGFFVSVFACFLNS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
7 | 7ntxA | 0.10 | 0.09 | 3.47 | 0.88 | SPARKS-K | | --------------QNHVLSLQIEFLSKQLQEISDKLDIINLNVLINSTLTEITPAYQRIKYVNSVTKNDDSFEFYLQTFHDVMTALKTASELITKENVGSEIGKVYNFLIVLTSLQAKAFLTLTACRKLLMNHHIDGQKREFRINILPTLSNNRGSDIDDPIVVLEAAPGYYQARLKPNYQVDRESMSKQLEQKYYIKDIEFTKIVFEKRLNQLGYEVTANFYDPSTGSIDLNKVKVESWKEKSCEECEDEYSIIKAETDGIYMPLGVVSETFLTPIYGLTVDEKNQK----------ITLTGKSYLRESLLETDLLNNETYLIAWNITSDNTGSWRANNNNAFVDKADTIKHKDGEFSQFIGNKLKPQYVIKGRPAIYLKNNKDTDTKNNFSDFQTVTKKFNSGVNPSEIYFLFKNILEIKSLEFLPQMLKPEDWIPSGNMKDGGRLEIL-----GDGYFKQSTYHLRLSKGTGRVSIIDESKYLLFVNSSKGECFIALEG |
8 | 7a23M | 0.08 | 0.02 | 0.87 | 0.79 | CNFpred | | --LWIAFFASFAVKVPMV----PVHIWLPEAEAPTAGSVILAGILLKFGTYGFLRFSIPMFPEATLCFTPFIYTLSAIAIIYTSLTTLRQIDLKKIIAYSSVAHMNLVTIGMFSNIQGIGGSILLMLSHGLVSSALFLCVGVLYDRH-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
9 | 3h0gA | 0.05 | 0.03 | 1.51 | 0.67 | DEthreader | | -------------------------------------------------GILSP--IRSMSVLGCQTCGETMADCPGHPPSVRPDDLTLVATYMDNEIAGQP---QALQKSGRPLKSI-ARGKEGR-GN-GKRVDFSARITLTYPEERHIRDGDVVGHRIRVMRLNLSV-GIVQDTLAGVRKFSLRLIRDDDKQSL-------------PT--------------------------------------------------------KTVGASQGGLVHTIWKKGPEICKGFFNGIQ---------G-KG--IN--Q--QQIVRIP---------NSYLRGLTPQEFFFHAMAGREGLIDTAVKTAETGIQL--ATLVEYPVNVRIIQNALQIFHLDLLDIIGLLITLFQ-----------------GEVEARFQQAVVSPMVGTAASIGPAGVRLKEILNVAKIPSLT--KIVRTYSNFVILQILGIE--ATRSALLKELRY |
10 | 4g1eA | 0.05 | 0.05 | 2.18 | 0.76 | MapAlign | | SGPEGSYFGFAVDFFVPSASSRMFLLVGAPKANTTQIVEGGQVLKCDWSSTRRCQPIEFDATGNRDYAKDDPLEFKSHQWFGASVRSKQDKILACAPLYHWRTEMKQEREPVGTCFLQDGYAPCRSQDIDAGQGFCQGGFSIDFTKADRVLLGGPGSFYWQGQLISDQVAEIVSKYDPNVYSIKYNNQLATRTAQAIFDDSYLGYSVAVGDFNGDGIDDFVSGVPRAARTLGMVYIYDGKNMSS------LYNFTGEQMAAYFGFSVAATDINGDDYADVFIGAPLFMDRGSDGKLQEVGQVSVSLQRASGDFQTTKLNGFEVFARFGSAIAPLGDLDQDGFNDIAIAA---------------PYGGEDKKGIVYIFNGRSTGLNAVPSQILEGQWAARSMPPSFGYSMKGATDIDKNGYPDLIVGAFGVDRAILYRAGVLPRKLNFQVELLLDKLKQKGAIRRALFLYSRSPSHSKNMTISRGGLMQ----CEELIAYLRD |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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