>O95486 (144 residues) NPVQVQKLQKELQRYLTRSLYRVDNLSDEGALNISDRTIPQPPILQLSVEKLSRDGAFLM DAGSVLMLWVGKNCTQNFLSQVLGVQNYASIPQPMTDLPELDTPESARIIAFISWLREQR PFFPILYVIRDESPMKANFLQNMI |
Sequence |
20 40 60 80 100 120 140 | | | | | | | NPVQVQKLQKELQRYLTRSLYRVDNLSDEGALNISDRTIPQPPILQLSVEKLSRDGAFLMDAGSVLMLWVGKNCTQNFLSQVLGVQNYASIPQPMTDLPELDTPESARIIAFISWLREQRPFFPILYVIRDESPMKANFLQNMI |
Prediction | CCCCCCCHHHHHHHHCCCCSSSCCCCCCCCCCCCCCCCSSCCCCCCCCHHHHCCCCSSSSSCCCSSSSSSCCCCCHHHHHHHHCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCSSSSSSCCCCCHHHHHHHCC |
Confidence | 963337806999982386478845688334877788853078853681888306977999679889999869999999999809999677586544466789989999999999999858898628999589972799999649 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 | | | | | | | NPVQVQKLQKELQRYLTRSLYRVDNLSDEGALNISDRTIPQPPILQLSVEKLSRDGAFLMDAGSVLMLWVGKNCTQNFLSQVLGVQNYASIPQPMTDLPELDTPESARIIAFISWLREQRPFFPILYVIRDESPMKANFLQNMI |
Prediction | 863552403530042012300301304674324476541431432411253036300000103320000014423351033006273154045433403426362043024004303743442130100157452243036327 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 | | | | | | | | |||||||||||||
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SS Seq | CCCCCCCHHHHHHHHCCCCSSSCCCCCCCCCCCCCCCCSSCCCCCCCCHHHHCCCCSSSSSCCCSSSSSSCCCCCHHHHHHHHCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCSSSSSSCCCCCHHHHHHHCC NPVQVQKLQKELQRYLTRSLYRVDNLSDEGALNISDRTIPQPPILQLSVEKLSRDGAFLMDAGSVLMLWVGKNCTQNFLSQVLGVQNYASIPQPMTDLPELDTPESARIIAFISWLREQRPFFPILYVIRDESPMKANFLQNMI | |||||||||||||||||||
1 | 3eh1A | 0.53 | 0.53 | 15.25 | 1.33 | DEthreader | TFHACLNIKLHLMKMIHPNLYRIDRLTDEGAVHVNDRIVPQPPLQKLSAEKLTREGAFLMDCGSVFYIWVGKGCDNNFIEDVLGYTNFASIPQKMTHLPELDTLSSERARSFITWLRDSRPLSPILHIVKDESPAKAEFFQHLI | |||||||||||||
2 | 1pcxA2 | 0.23 | 0.22 | 6.75 | 2.67 | SPARKS-K | -------PLKYLIKNIYPDVYSLHDMADEAG--LPVGTIVLPQPINATSSLFERYGLYLIDNGNELFLWMGGDAVPALVFDVFGTQDIFDIPIGKQEIPVVESEFNQRVRNIINQLRNHDDVYQSLYIVRGASTLRLWASSTLV | |||||||||||||
3 | 1pcxA | 0.23 | 0.22 | 6.74 | 1.53 | MapAlign | --------LKYLIKNIYPDVYSLHDMADEAGL--PVGTIVLPQPINATSSLFERYGLYLIDNGNELFLWMGGDAVPALVFDVFGTQDIFDIPIGKQEIPVVNSEFNQRVRNIINQLRDDVITYQSLYIVRGVATLRLWASSTLV | |||||||||||||
4 | 1pcxA2 | 0.24 | 0.22 | 6.94 | 1.30 | CEthreader | -------PLKYLIKNIYPDVYSLHDMADEAGLPV--GTIVLPQPINATSSLFERYGLYLIDNGNELFLWMGGDAVPALVFDVFGTQDIFDIPIGKQEIPVVESEFNQRVRNIINQLRNHDDTYQSLYIVRGASTLRLWASSTLV | |||||||||||||
5 | 3eh1A2 | 0.54 | 0.53 | 15.43 | 2.07 | MUSTER | CQIKSQ-PLVHLMKMIHPNLYRIDRLTDEGAVHVNDRIVPQPPLQKLSAEKLTREGAFLMDCGSVFYIWVGKGCDNNFIEDVLGYTNFASIPQKMTHLPELDTLSSERARSFITWLRDSRPLSPILHIVKDESPAKAEFFQHLI | |||||||||||||
6 | 1pcxA2 | 0.24 | 0.22 | 6.94 | 3.58 | HHsearch | -------PLKYLIKNIYPDVYSLHDMADEAGLP--VGTIVLPQPINATSSLFERYGLYLIDNGNELFLWMGGDAVPALVFDVFGTQDIFDIPIGKQEIPVVESEFNQRVRNIINQLRNHDDTYQSLYIVRGASTLRLWASSTLV | |||||||||||||
7 | 1pcxA2 | 0.24 | 0.23 | 7.12 | 1.91 | FFAS-3D | -PL------KYLIKNIYPDVYSLHDMADEAGL--PVGTIVLPQPINATSSLFERYGLYLIDNGNELFLWMGGDAVPALVFDVFGTQDIFDIPIGKQEIPVVESEFNQRVRNIINQLRNHDDTYQSLYIVRGASTLRLWASSTLV | |||||||||||||
8 | 1pcxA2 | 0.24 | 0.22 | 6.94 | 1.65 | EigenThreader | -------PLKYLIKNIYPDVYSLHDMADEAGLPV--GTIVLPQPINATSSLFERYGLYLIDNGNELFLWMGGDAVPALVFDVFGTQDIFDIPIGKQEIPVVESEFNQRVRNIINQLRNDVITYQSLYIVRGASLLRLWASSTLV | |||||||||||||
9 | 3eh1A | 0.54 | 0.53 | 15.24 | 2.21 | CNFpred | --QIKSQPLVHLMKMIHPNLYRIDRLTDEGAVHVNDRIVPQPPLQKLSAEKLTREGAFLMDCGSVFYIWVGKGCDNNFIEDVLGYTNFASIPQKMTHLPELDTLSSERARSFITWLRDSRPLSPILHIVKDESPAKAEFFQHLI | |||||||||||||
10 | 1pcxA | 0.22 | 0.22 | 6.80 | 1.33 | DEthreader | FYGYLSFLELYLIKNIYPDVYSLHDMADEAGLP--VGTIVLPQPINATSSLFERYGLYLIDNGNELFLWMGGDAVPALVFDVFGTQDIFDIPIGKQEIPVVESEFNQRVRNIINQLRNHVITYQSLYIVRGAVALRLWASSTLV | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |