Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300
| | | | | | | | | | | | | | | |
| SS Seq | CCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCSSSSSCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCSSSCCCHHHHHHHHHHHHHHHHHHCCCCCCSSSSCCCCHHHHHHHHHHHCCSSSSSSCCCCCCSCHHHHHHHHHHCCSSSSSSCCCCCCCCSCCHHHHHHHHHHHCCCSSSSCCCCCHHHHCHHHHCCCCCCCCCCCCCCCCSSSSCCCCCCCCCCCSSSSSSSCHHHCCHHHSSCCCCCCCCCCCCCSSCCCCHHHHHHHHHHHHHHHHHHHCC VDKEYVKALPSQGLSSSAVLEKLKEYSSMDAFWQEGRASGTVYSGEEKLTELLVKAYGDFAWSNPLHPDIFPGLRKIEAEIVRIACSLFNGGPDSCGCVTSGGTESILMACKAYRDLAFEKGIKTPEIVAPQSAHAAFNKAASYFGMKIVRVPLTKMMEVDVRAMRRAISRNTAMLVCSTPQFPHGVIDPVPEVAKLAVKYKIPLHVDACLGGFLIVFMEKAGYPLEHPFDFRVKGVTSISADTHKYGYAPKGSSLVLYSDKKYRNYQFFVDTDWQGGIYASPTIAGSRPGGISAACWAALMHFGENGYVE |
1 | 4q6rA | 0.96 | 0.82 | 23.09 | 1.33 | DEthreader | | --------------------------------------K--QVSGEEKLTELLVKAYGDFAWSNPLHPDIFPGLRKIEAEIVRIACSLFNGGPDSCGCVTSGGTESILMACKAYRDLAFEKGIKTPEIVAPQSAHAAFNKAASYFGMKIVRVPLTKMMEVDVRAMRRAISRNTAMLVCSTPQFPHGVIDPVPEVAKLAVKYKIPLHVDACLGGFLIVFMEKAGYPLEHPFDFRVKGVTSISADTH-YGYAPKGSSLVLYSDKKYRNYQFFVDTW-GGIYASP-TIAGSRPGGISAACWAALMHFGENGYEA |
2 | 4q6rA | 1.00 | 0.99 | 27.64 | 1.46 | SPARKS-K | | ---EYVKALPSQGLSSSAVLEKLKEYSSMDAFWQEGRASGTVYSGEEKLTELLVKAYGDFAWSNPLHPDIFPGLRKIEAEIVRIACSLFNGGPDSCGCVTSGGTESILMACKAYRDLAFEKGIKTPEIVAPQSAHAAFNKAASYFGMKIVRVPLTKMMEVDVRAMRRAISRNTAMLVCSTPQFPHGVIDPVPEVAKLAVKYKIPLHVDACLGGFLIVFMEKAGYPLEHPFDFRVKGVTSISADTH-YGYAPKGSSLVLYSDKKYRNYQFFVDTDWQGGIYASPTIAGSRPGGISAACWAALMHFGENGYVE |
3 | 3madA | 0.52 | 0.49 | 14.14 | 0.47 | MapAlign | | -------------LPRAEILAEIAAMGAESPAWRDGYASGAVYHGDEHHIAFLNEVYALQSQSNPLHPDLWPSTAKFEAEVVAMTAHMLGGAGTVCGTVTSGGTESLLLAMKTYRDWARAKGITAPEAVVPVSAHAAFDKAAQYFGIKLVRTPLDADYRADVAAMREAITPNTVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACLGGFILPWAERLGYPV-PPFDFRLEGVTSVSADTH-YGYGAKGTSVILYRRPDLLHYQYFIAADWPGGLYFSPTFAGSRPGALSATAWAAMLSLGEEGYL- |
4 | 3madA | 0.50 | 0.50 | 14.36 | 0.39 | CEthreader | | DRFPSHARLPRAGLPRAEILAEIAAMGAESPAWRDGYASGAVYHGDEHHIAFLNEVYALQSQSNPLHPDLWPSTAKFEAEVVAMTAHMLGGDAAVCGTVTSGGTESLLLAMKTYRDWARATGITAPEAVVPVSAHAAFDKAAQYFGIKLVRTPLDADYRADVAAMREAITPNTVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACLGGFILPWAERLGYPV-PPFDFRLEGVTSVSADTH-YGYGAKGTSVILYRRPDLLHYQYFIAADWPGGLYFSPTFAGSRPGALSATAWAAMLSLGEEGYLD |
5 | 4q6rA | 1.00 | 0.99 | 27.64 | 1.52 | MUSTER | | ---EYVKALPSQGLSSSAVLEKLKEYSSMDAFWQEGRASGTVYSGEEKLTELLVKAYGDFAWSNPLHPDIFPGLRKIEAEIVRIACSLFNGGPDSCGCVTSGGTESILMACKAYRDLAFEKGIKTPEIVAPQSAHAAFNKAASYFGMKIVRVPLTKMMEVDVRAMRRAISRNTAMLVCSTPQFPHGVIDPVPEVAKLAVKYKIPLHVDACLGGFLIVFMEKAGYPLEHPFDFRVKGVTSISADTH-YGYAPKGSSLVLYSDKKYRNYQFFVDTDWQGGIYASPTIAGSRPGGISAACWAALMHFGENGYVE |
6 | 5hsjA1 | 0.22 | 0.22 | 6.98 | 1.20 | HHsearch | | SDPQNSPAFKKTVGHMKTVLDQLSERITESVPWHSGRYWGHMNS-ETLMPALLAYNYAMLWNGNNVAYESSPATSQMEEEVGQEFARLMGYDY-GWGHIVADGSLANLEGLWYARNIKSRSGQRLGKWLVPQTKHYSWMKAADIIGIQVVPVPIDSNYRMDIQALESIIRKYILGVVGVAGSTEEGAVDGIDKIVALRQKLYFYLHVDAAYGGYARALFLDEDDQFIPYFTEAFDQAESITIDPHKMGYVPYSAGGIVIQDIRM-RDTISYFAGAIPALLGAYILEGSKAGATAASVWAAHHTLPVTGYGK |
7 | 3mc6A | 0.49 | 0.48 | 13.91 | 2.93 | FFAS-3D | | ------PQLPSNGIPQDDVIEELNKLNDLITQWKEGKVSGAVYHGGDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVVSMVLRMFNAPSTGCGTTTSGGTESLLLACLSAKMYALHHGITEPEIIAPVTAHAGFDKAAYYFGMKLRHVELDTTYQVDLGKVKKFINKNTVLLVGSAPNFPHGIADDIEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHY-GFAPKGSSVIMYRNSDLRMHQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMGENGYIE |
8 | 4q6rA | 0.87 | 0.86 | 24.17 | 0.70 | EigenThreader | | EYVKALPSQGLSSSAVLEKLKEYSSMDAFWQEGRASGT---VYSGEEKLTELLVKAYGDFAWSNPLHPDIFPGLRKIEAEIVRIACSLFNGGPDSCGCVTSGGTESILMACKAYRDLAFEKGIKTPEIVAPQSAHAAFNKAASYFGMKIVRVPLTKMMEVDVRAMRRAISRNTAMLVCSTPQFPHGVIDPVPEVAKLAVKYKIPLHVDACLGGFLIVFMEKAGYPLEHPFDFRVKGVTSISADTHYGY-APKGSSLVLYSDKKYRNYQFFVDTDWQGGIYASPTIAGSRPGGISAACWAALMHFGENGYVE |
9 | 4q6rA | 1.00 | 0.99 | 27.64 | 2.49 | CNFpred | | ---EYVKALPSQGLSSSAVLEKLKEYSSMDAFWQEGRASGTVYSGEEKLTELLVKAYGDFAWSNPLHPDIFPGLRKIEAEIVRIACSLFNGGPDSCGCVTSGGTESILMACKAYRDLAFEKGIKTPEIVAPQSAHAAFNKAASYFGMKIVRVPLTKMMEVDVRAMRRAISRNTAMLVCSTPQFPHGVIDPVPEVAKLAVKYKIPLHVDACLGGFLIVFMEKAGYPLEHPFDFRVKGVTSISADTHMYGYAPKGSSLVLYSDKKYRNYQFFVDTDWQGGIYASPTIAGSRPGGISAACWAALMHFGENGYVE |
10 | 5k1rA | 0.43 | 0.38 | 11.03 | 1.33 | DEthreader | | -------------------------------------RAV-RECGDHEHYAFLNEAYGLFSHVNALQRDLCPSMNRMESEIVAMTVALLHGEQRACGALSLGGTESILNATLAYREKARAEGIERPRMIWPASAHPAFRKAAHLFGFDVTVAPIDPVMQVDADFVRDAVDANTVMLVGSACNYPYGTIDPIGALSAIAVEKDVWLHVDGCLGGWMLPWGEALGYPDIPAFDFRLPGVTSISADTHKFGYGPKGGSVLAWRDASFRRHQYFLMTW-GGVYGS-PGLTGSRSGGLIAATWAALRSLGREGYLR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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