Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| SS Seq | CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCSSCCCCCCCCC GRGIDQCIPLFVEAALERLTREVKTSELRTMCLQVAIAALYYNPHLLLNTLENLRFPNNVEPVTNHFITQWLNDVDCFLGLHDRKMCVLGLCALIDMEQIPQVLNQVSGQILPAFILLFNGLKRAYACHAEHENDSDDDDEAEDDDETEELGSDEDDIDEDGQEYLEILAKQAGEDGDDEDWEEDDAEETALEGYSTIIDDEDNPVDEYQIFKAIFQTIQNRNPVWYQALTHGLNEEQRKQLQDIATLADQRRAAHESKMIEKHGGYKFSAPVVPSSFNFGGPAPGMN |
1 | 1wa5C | 0.08 | 0.06 | 2.19 | 1.21 | SPARKS-K | | MNRLRPYIKQIAVLLLQRLQNSKTERYVKKLTVFFGLISNKLGSDFLIHFIDEVQD-----GLFQQIWGNIITTLPTIGNLLDRKIALIGVLNMVIGQFFQSKYPTLISSTMNSIIETASS-----------QSIANLKNDY-------------------------------VEEISTFGSHFSKLVSISEKP-FDPLPEIDVNNGVRLYVAEALNKYNAISNTFLNTILPQLTQENQVKLNQLLV----------------------------------------- |
2 | 1wa5C4 | 0.11 | 0.07 | 2.64 | 2.88 | HHsearch | | MNRLRPYIKQIAVLLLQRLQNS-KTRYVKKLTVFFGLISNKLGSDFLIHFIDEVQD-----GLFQQIWNFIITTLPTIGNLLDRKIALIGVLNMVINGQFQSKYPTLISSTMNSIIETASS-QSIAN------------LK-ND-Y--------VEEISTFGSHF-SKLVSISE-------------------KPFDPLP----EINVRLYVAEALNKYNAISNTFLNTILPQLTQENQVKLNQLLV----------------------------------------- |
3 | 1wa5C4 | 0.10 | 0.07 | 2.56 | 1.33 | FFAS-3D | | ---LRPYIKQIAVLLLQRLQNSKTERYVKKLTVFFGLISNKLGSDFLIHFIDEVQDG----LFQQIWGNFIITTLPTIGNLLDRKIALIGVLNMVI---NGQFFQSKYPTLISSTMNSIIETAS---------SQSIANLKNDYVEEISTFGSHFSKL------------------------------VSISEKPFDPLPEIDVNNGVRLYVAEALNKYNAISGNFLNTILPQLTQENQVKLNQLL------------------------------------------ |
4 | 1z3hA | 0.08 | 0.05 | 2.05 | 1.01 | CNFpred | | MNRLRPYIKQIAVLLLQRLQNSKTERYVKKLTVFFGLISNKLGSDFLIHFIDEVQ----DGLFQQIWGNFIITTLPTIGNLLDRKIALIGVLNMVINGFFQSKYPTLISSTMNSIIETASSQ----------------------------------------------------------GSHFSKLVSISEK-PFDPLPEIDVNNGVRLYVAEALNKYNAIGNTFLNTILPQLTQENQVKLNQLLVG---------------------------------------- |
5 | 6n1zA | 0.11 | 0.08 | 3.00 | 0.83 | DEthreader | | HWWFEVTQMVAPVILPEMYKIFTMAEVYGIRTRSRAVEIFTTCAHMICEAAKVLI-----FPVVQQFTEAFVQALQIPDDSGFKMEVLKAVTALV-K-NFPKHMVSSMQQILPIVWNTLTESAAFYVRTENYTEEVEDP------------------------VDS-------------------D-GEVLG--F----E------NLVFSIFEFVHALL-ENSKFKS-TVK-K-A--LPELIYYIILYMQIT-QI-VWANPQQFVEDEPFLRWASRFTAMSLIFLQA |
6 | 1wa5C4 | 0.09 | 0.06 | 2.38 | 1.18 | SPARKS-K | | MNRLRPYIKQIAVLLLQRLQNSKTERYVKKLTVFFGLISNKLGSDFLIHFIDEVQD-----GLFQQIWGNIITTLPTIGNLLDRKIALIGVLNMVIGQFFQSKYPTLISSTMNSIIETASS-----------QSIANLKNDYVEEISTFGSHFSKL--------------VSISEKPFD------------------PLPEIDVNNGVRLYVAEALNKYNAISNTFLNTILPQLTQENQVKLNQLLV----------------------------------------- |
7 | 1wa5C4 | 0.09 | 0.06 | 2.37 | 0.84 | MapAlign | | MNRLRPYIKQIAVLLLQRLQNSK-TERYVKKLTVFFGLISNKGSDFLIHFIDEV-----QDGLFQQIWGFIITTLPTIGNLLDRKIALIGVLNMVIGQFFQSKYPTLISSTMNSIIETASSQSIANLKN-------------------------------------------DYVEEISTFGSHFSKLVSISEKPFDPLPEIDVNNGVRLYVAEALNKYNAIGNTFLNTILPQLTQENQVKLNQLL------------------------------------------ |
8 | 1wa5C4 | 0.10 | 0.07 | 2.48 | 0.69 | CEthreader | | MNRLRPYIKQIAVLLLQRLQNSKTERYVKKLTVFFGLISNKLGSDFLIHFIDEVQD----GLFQQIWGNFIITTLPTIGNLLDRKIALIGVLNMVINGFFQSKYPTLISSTMNSIIETASSQSIANLKNDYVEEISTFGSHFSKL-------------------------------------------VSISEKPFDPLPEIDVNNGVRLYVAEALNKYNAISNTFLNTILPQLTQENQVKLNQLLV----------------------------------------- |
9 | 1wa5C4 | 0.10 | 0.07 | 2.48 | 0.81 | MUSTER | | MNRLRPYIKQIAVLLLQRLQNSKTERYVKKLTVFFGLISNKLGSDFLIHFIDEVQ----DGLFQQIWGNFIITTLPTIGNLLDRKIALIGVLNMVINGQFQSKYPTLISSTMNSIIETASS--------------------------QSIANLKNDYVEE-----------------ISTFGSHFSKLVSISEKPFDPLPEIDVNNGVRLYVAEALNKYNAISNTFLNTILPQLTQENQVKLNQLLV----------------------------------------- |
10 | 1wa5C | 0.10 | 0.07 | 2.55 | 2.70 | HHsearch | | MNRLRPYIKQIAVLLLQRLQNS-KTERYVKKLTVFFGLISNLGSDFLIHFIDEVQD-----GLFQIWGNFIITTLPTIGNLLDRKIALIGVLNMVINGFFQSKYPTLISSTMNSIIETASS-QSIANLK-------N-D----Y-V---------EEISTFGSHF-SKLVSIS-------E------------KPFDPLP----EIGVRLYVAEALNKYNAISNTFLNTILPQLTQENQVKLNQLLV----------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
|