>O95256 (149 residues) MLCLGWIFLWLVAGERIKGFNISGCSTKKLLWTYSTRSEEEFVLFCDLPEPQKSHFCHRN RLSPKQVPEHLPFMGSNDLSDVQWYQQPSNGDPLEDIRKSYPHIIQDKCTLHFLTPGVNN SGSYICRPKMIKSPYDVACCVKMILEVKP |
Sequence |
20 40 60 80 100 120 140 | | | | | | | MLCLGWIFLWLVAGERIKGFNISGCSTKKLLWTYSTRSEEEFVLFCDLPEPQKSHFCHRNRLSPKQVPEHLPFMGSNDLSDVQWYQQPSNGDPLEDIRKSYPHIIQDKCTLHFLTPGVNNSGSYICRPKMIKSPYDVACCVKMILEVKP |
Prediction | CCHHHHHHHHHHCCCSSCCCCCCCCCCCCSSSSSSCCCCCSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSCCCCCCHHHHHCCCCCCSCCCCSSSSCCCCCCCCSSSSSSCCCCCCCCCCCCSSSSSSSSCC |
Confidence | 93277878776306521210047762442135762378843899827998101145563335777776555567888620227887258999378875478650126866887151346662699802334686555433789997469 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 | | | | | | | MLCLGWIFLWLVAGERIKGFNISGCSTKKLLWTYSTRSEEEFVLFCDLPEPQKSHFCHRNRLSPKQVPEHLPFMGSNDLSDVQWYQQPSNGDPLEDIRKSYPHIIQDKCTLHFLTPGVNNSGSYICRPKMIKSPYDVACCVKMILEVKP |
Prediction | 43231112001124441452424614444331413345643000103145556541354441454633642414546424304013347755334513752333345621020224425421110032453454453100030105248 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCHHHHHHHHHHCCCSSCCCCCCCCCCCCSSSSSSCCCCCSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSCCCCCCHHHHHCCCCCCSCCCCSSSSCCCCCCCCSSSSSSCCCCCCCCCCCCSSSSSSSSCC MLCLGWIFLWLVAGERIKGFNISGCSTKKLLWTYSTRSEEEFVLFCDLPEPQKSHFCHRNRLSPKQVPEHLPFMGSNDLSDVQWYQQPSNGDPLEDIRKSYPHIIQDKCTLHFLTPGVNNSGSYICRPKMIKSPYDVACCVKMILEVKP | |||||||||||||||||||
1 | 5dzoA | 0.17 | 0.10 | 3.32 | 1.11 | FFAS-3D | ------------------------------MVKVGGEAGPSVTLPCHY---------------------------SGAVTSMCWNRGSCSLNGTHVTYRKDTRYKLLGDSLTIENTAVSDSGVYCCRVEHRGWFNDMK--ITVSLEIVP | |||||||||||||
2 | 5wy8B | 0.18 | 0.13 | 4.36 | 1.33 | CNFpred | --------------------SADGCTDWSIIKKYQVLVGEPVRIKCALFYG-----------YIRTNYSLAQS----AGLSLMWYKSSGPGDFEEPIAFDGSRMSKEEDSIWFRPTLLQDSGLYACVIRNS----TYCMKVSISLTVGE | |||||||||||||
3 | 5c6wJ | 0.16 | 0.11 | 3.79 | 1.00 | DEthreader | ------------------QGLEMKQSALTQPASVSASPGQSITISCTG-TS----SDV---G-----A----------YDWVSWYQQHPGKAPKLLIRPVSHRFSGSKASLTISGLQAEDEADYYCASAT--L-LDTYVFGGTKVTVLG | |||||||||||||
4 | 2p1yA2 | 0.21 | 0.15 | 4.91 | 0.99 | SPARKS-K | -----------SADDAKKDAAKKDGQVRQSPQSLTVWEGETAILNCSYEN--------------------------SAFDYFPWYQQFPGEGPALLISKEDGRFTEKKLSLHIADSQPGDSATYFCAAIDTN-AYKVIFGKGTHLHVLP | |||||||||||||
5 | 4mngE | 0.16 | 0.13 | 4.23 | 0.82 | MapAlign | -VTLNCLYETSWWSYYIFWYKQMIFLFCALGKSVIRQTGSSAEITCDL----------------------------AEGSYIHWYLHQEGKAPQRLLGISPGKYDTYNLRMILRNLIENDSGVYYCATWDEK--YYKKLFGGTKLIITD | |||||||||||||
6 | 4yfcB1 | 0.17 | 0.12 | 3.97 | 0.38 | CEthreader | -----------------------CTDWSVDIKKYQVLVGEPVRIKCALFYGYI---------------RTNYSLAQSAGLSLMWYKSSGPGDFEEPIAFDGSRMSKEEDSIWFRPTLLQDSGLYACVIRN----STYCMKVSISLTVG- | |||||||||||||
7 | 3zyjA | 0.16 | 0.14 | 4.70 | 0.75 | MUSTER | NCDILWLSWWIKDMAPSNTACCARCNTPPNLKGRYIGN--------FTCYAPVIVEPPADLNVTEGMAAELKCRASTSLTSVSWIT--PNGTVMTHGAYKVRIAVLSDGTLNFTNVTVQDTGMYTCMVSNSVG----NTTASATLNVT- | |||||||||||||
8 | 3oq3B1 | 0.15 | 0.12 | 4.05 | 0.41 | HHsearch | MIDIEITEFFRDTPAKDSKWLNPSCMFGGT-MNDMAALGEPFSAKCPPIEDS--LLSHR--Y-------------NDKDNVVNWEKIGKTR----RP----LNRRVKNGDLWIANYTSNDSHRYLCTVTT------KGDCVQGIVRSHI | |||||||||||||
9 | 4yfcB1 | 0.18 | 0.13 | 4.14 | 1.11 | FFAS-3D | ------------------------CTDSVDIKKYQVLVGEPVRIKCAL----------------FYGYIRTNYSLQSAGLSLMWYKSSGPGDFEEPIAFDGSRMSKEEDSIWFRPTLLQDSGLYACVIRNSTY----CMKVSISLTVG- | |||||||||||||
10 | 6jo7A2 | 0.13 | 0.09 | 3.27 | 0.38 | EigenThreader | -----------------AAAS----SSLVSESVVSLAAGTQAVLRCQSPRMV----------------WTQDRLHDRAQQVVHWDRQGVSHDRADRLLYGPDRVSVNDFSLRIDELERADEGIYSCHLHHHYCG---LHERRVFHLQVT | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |