Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| SS Seq | CCCCHHHHHHHHHHHHSCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHSSSSSSSSSCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SHWDLGSSFFFAGTVITTIGFGNISPRTEGGKIFCIIYALLGIPLFGFLLAGVGDQLGTIFGKGIAKVEDTFIKWNVSQTKIRIISTIIFILFGCVLFVALPAIIFKHIEGWSALDAIYFVVITLTTIGFGDYVAGGSDIEYLDFYKPVVWFWILVGLAYFAAVLSMIGDWLRVISKKTKEEVGEFR |
1 | 3ukmA | 0.31 | 0.28 | 8.57 | 1.33 | DEthreader | | LEWDFTSALFFASTVLSTTGYGHTVPLSDGGKAFCIIYSVIGIPFTLLFLTAVVQRITVHVTRRPVL-YF-------SKQVVAIVHAVLLGFVTVSCFFFIPAAVFSVLEDWNFLESFYFCFISLSTIGLGDYVPEGYNQKFRELYKIGITCYLLLGLIAMLVVLETFCELHELKKF-KM------- |
2 | 4bw5A2 | 0.78 | 0.71 | 19.96 | 2.18 | SPARKS-K | | SHWDLGSAFFFAGTVITTIGYGNIAPSTEGGKIFCILYAIFGIPLFGFLLAGIGDQLGTIFGKSIARVEKVFRK-------IRVISTILFILAGCIVFVTIPAVIFKYIEGWTALESIYFVVVTLTTVGFGDFVAGGNAGIYREWYKPLVWFWILVGLAYFAAVLSMIGDWLRVLS----------- |
3 | 6rv2A | 0.35 | 0.33 | 9.74 | 0.82 | MapAlign | | VQWRFAGSFYFAITVITTIGYGHAAPSTDGGKVFCMFYALLGIPLTLVMFQSLGERINTLV---RYLLHRAKKGLGA---DVSMANMVLIGFFSCISTLCIGAAAFSHYEHWTFFQAYYYCFITLTTIGFGDYVALQKDQ-ALPQYVAFSFVYILTGLTVIGAFLNLVVLRFMTMNAEDEKR----- |
4 | 6rv2A | 0.33 | 0.32 | 9.47 | 0.69 | CEthreader | | VQWRFAGSFYFAITVITTIGYGHAAPSTDGGKVFCMFYALLGIPLTLVMFQSLGERINTLVRYLLHRAKKGLGA------DVSMANMVLIGFFSCISTLCIGAAAFSHYEHWTFFQAYYYCFITLTTIGFGDYVALQKALQTQPQYVAFSFVYILTGLTVIGAFLNLVVLRFMTMNAEDEKRD---- |
5 | 4bw5A2 | 0.78 | 0.71 | 19.96 | 1.93 | MUSTER | | SHWDLGSAFFFAGTVITTIGYGNIAPSTEGGKIFCILYAIFGIPLFGFLLAGIGDQLGTIFGKSIARVEKVFRKI-------RVISTILFILAGCIVFVTIPAVIFKYIEGWTALESIYFVVVTLTTVGFGDFVAGGNAINYREWYKPLVWFWILVGLAYFAAVLSMIGDWLRVLS----------- |
6 | 6rv2A | 0.34 | 0.32 | 9.61 | 2.64 | HHsearch | | VQWRFAGSFYFAITVITTIGYGHAAPSTDGGKVFCMFYALLGIPLTLVMFQSLGERINTLVRYLLHRAKKGLGA---DVS---MANMVLIGFFSCISTLCIGAAAFSHYEHWTFFQAYYYCFITLTTIGFGDYVALQKDQATQPQYVAFSFVYILTGLTVIGAFLNLVVLRFMTMNAEDEKRD---- |
7 | 4bw5A2 | 0.78 | 0.70 | 19.81 | 2.37 | FFAS-3D | | SHWDLGSAFFFAGTVITTIGYGNIAPSTEGGKIFCILYAIFGIPLFGFLLAGIGDQLGTIFGKSIARVEKVFRKI-------RVISTILFILAGCIVFVTIPAVIFKYIEGWTALESIYFVVVTLTTVGFGDFVAGGNGINYREWYKPLVWFWILVGLAYFAAVLSMIGDWLRVL------------ |
8 | 6wlvA | 0.32 | 0.30 | 9.02 | 1.43 | EigenThreader | | NNWNWPNAMIFAATVITTIGYGNVAPKTPAGRLFCVFYGLFGVPLCLTWISALGKFFGGRAKRLGQFLTRRG---VSLR-KAQITCTAIFIVWGVLVHLVIPPFVFMVTEEWNYIEGLYYSFITISTIGFGDFVAGVYHA----LYRYFVELWIYLGLAWLSLFVNWKVSMFVEVHKAIKKRR---- |
9 | 5vk5A | 0.98 | 0.98 | 27.57 | 1.27 | CNFpred | | SHWDLGSSFFFAGTVITTIGFGNISPRTEGGKIFCIIYALLGIPLFGFLLAGVGDQLGTIFGKGIAKVEDTFIKWNVSQTKIRIISTIIFILFGCVLFVALPAVIFKHIEGWSALDAIYFVVITLTTIGFGDYVAGGSDIEYLDFYKPVVWFWILVGLAYFAAVLSMIGDWLRVIAKKTKEAVGEFR |
10 | 6wlvA | 0.32 | 0.29 | 8.87 | 1.33 | DEthreader | | QNWNWPNAMIFAATVITTIGYGNVAPKTPAGRLFCVFYGLFGVPLCLTWISALGKFFGGRAKRLGQFLTRRG-VS--LR-KAQITCTAIFIVWGVLVHLVIPPFVFMVTEEWNYIEGLYYSFITISTIGFGDFVAVNPSANYHALYRYFVELWIYLGLAWLSLFVN-WK--VSMFVEVHK------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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