>O95057 (198 residues) MPEQSNDYRVVVFGAGGVGKSSLVLRFVKGTFRDTYIPTIEDTYRQVISCDKSVCTLQIT DTTGSHQFPAMQRLSISKGHAFILVFSVTSKQSLEELGPIYKLIVQIKGSVEDIPVMLVG NKCDETQREVDTREAQAVAQEWKCAFMETSAKMNYNVKELFQELLTLETRRNMSLNIDGK RSGKQKRTDRVKGKCTLM |
Sequence |
20 40 60 80 100 120 140 160 180 | | | | | | | | | MPEQSNDYRVVVFGAGGVGKSSLVLRFVKGTFRDTYIPTIEDTYRQVISCDKSVCTLQITDTTGSHQFPAMQRLSISKGHAFILVFSVTSKQSLEELGPIYKLIVQIKGSVEDIPVMLVGNKCDETQREVDTREAQAVAQEWKCAFMETSAKMNYNVKELFQELLTLETRRNMSLNIDGKRSGKQKRTDRVKGKCTLM |
Prediction | CCCCCCCSSSSSSCCCCCCHHHHHHHHHHCCCCCCCCCCCCSSSSSSSSSCCSSSSSSSSSCCCCCHHHHHHHHHHCCCCSSSSSSSCCCHHHHHHHHHHHHHHHHHHCCCCCCCSSSSSSCCCCCCCCCCHHHHHHHHHHHCCSSSSCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCSSC |
Confidence | 998666237999969998588988887628556876887765777999999999999997478851556789986426989999996999789999999999999985778997199997577764367599999999999399189823688989899999999999985324466766666667777788863569 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 | | | | | | | | | MPEQSNDYRVVVFGAGGVGKSSLVLRFVKGTFRDTYIPTIEDTYRQVISCDKSVCTLQITDTTGSHQFPAMQRLSISKGHAFILVFSVTSKQSLEELGPIYKLIVQIKGSVEDIPVMLVGNKCDETQREVDTREAQAVAQEWKCAFMETSAKMNYNVKELFQELLTLETRRNMSLNIDGKRSGKQKRTDRVKGKCTLM |
Prediction | 866462400000001210201000100145414762301013414230404644020000010323314313632144010000000013560063045015303613643640000000011127735144730451077270300000024743044003400530364457564756655565567655431105 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
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SS Seq | CCCCCCCSSSSSSCCCCCCHHHHHHHHHHCCCCCCCCCCCCSSSSSSSSSCCSSSSSSSSSCCCCCHHHHHHHHHHCCCCSSSSSSSCCCHHHHHHHHHHHHHHHHHHCCCCCCCSSSSSSCCCCCCCCCCHHHHHHHHHHHCCSSSSCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCSSC MPEQSNDYRVVVFGAGGVGKSSLVLRFVKGTFRDTYIPTIEDTYRQVISCDKSVCTLQITDTTGSHQFPAMQRLSISKGHAFILVFSVTSKQSLEELGPIYKLIVQIKGSVEDIPVMLVGNKCDETQREVDTREAQAVAQEWKCAFMETSAKMNYNVKELFQELLTLETRRNMSLNIDGKRSGKQKRTDRVKGKCTLM | |||||||||||||||||||
1 | 2f9mA | 0.28 | 0.26 | 7.86 | 1.33 | DEthreader | --MYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLSKSTIGVEFATRSIQVDGKTIKAQIWDTAGQEYRR-ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHAD-S-NIVIMLVGNKSDLRHRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHD-------------- | |||||||||||||
2 | 6zioA | 0.37 | 0.32 | 9.45 | 1.71 | SPARKS-K | ---GMTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNSKSFADINLYREQIKRVKDS-DDVPMVLVGNKSDLPTRTVDTKQAHELAKSYGIPFIETSAKTRQGVEDAFYTLVREIRQYRMKK----------------------- | |||||||||||||
3 | 2f9mA | 0.30 | 0.26 | 7.81 | 0.55 | MapAlign | ---YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTGVEFATRSIQVDGKTIKAQIWDTAGQERYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHA--DSNIVIMLVGNKSDLRLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQ------------------------ | |||||||||||||
4 | 2f9mA | 0.29 | 0.27 | 8.14 | 0.41 | CEthreader | --MYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIVEFATRSIQVDGKTIKAQIWDTAGQERYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHA--DSNIVIMLVGNKSDLRLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHD-------------- | |||||||||||||
5 | 2gf0B | 1.00 | 0.88 | 24.61 | 1.72 | MUSTER | --EQSNDYRVVVFGAGGVGKSSLVLRFVKGTFRDTYIPTIEDTYRQVISCDKSVCTLQITDTTGSHQFPAMQRLSISKGHAFILVFSVTSKQSLEELGPIYKLIVQIKGSVEDIPVMLVGNKCDETQREVDTREAQAVAQEWKCAFMETSAKMNYNVKELFQELLTLETRRNMSLN---------------------- | |||||||||||||
6 | 1ukvY | 0.27 | 0.27 | 8.20 | 0.90 | HHsearch | -SEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKKTVELDGKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYAT--STVLKLLVGNKCDLKDRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKESMSQQNLNETTQKKEDNVNLKGQSLC-- | |||||||||||||
7 | 2fn4A | 0.40 | 0.34 | 10.14 | 2.83 | FFAS-3D | -PPPSETHKLVVVGGGGVGKSALTIQFIQSYFVSDYDPTIEDSYTKICSVDGIPARLDILDTAGQEEFGAMREQYMRAGHGFLLVFAINDRQSFNEVGKLFTQILRVKD-RDDFPVVLVGNKADLEQRQVPRSEASAFGASHHVAYFEASAKLRLNVDEAFEQLVRAVRKYQEQ------------------------ | |||||||||||||
8 | 1ukvY | 0.25 | 0.24 | 7.37 | 0.65 | EigenThreader | -SEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYSTIGVDFKIKTVELDGKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYA--TSTVLKLLVGNCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKESMLNETTQKKEDKGNVNLKGQSLC---- | |||||||||||||
9 | 2gf0A | 1.00 | 0.87 | 24.46 | 1.78 | CNFpred | ---QSNDYRVVVFGAGGVGKSSLVLRFVKGTFRDTYIPTIEDTYRQVISCDKSVCTLQITDTTGSHQFPAMQRLSISKGHAFILVFSVTSKQSLEELGPIYKLIVQIKGSVEDIPVMLVGNKCDETQREVDTREAQAVAQEWKCAFMETSAKMNYNVKELFQELLTLETRRNMSLN---------------------- | |||||||||||||
10 | 6s5fA | 0.26 | 0.23 | 7.16 | 1.33 | DEthreader | --IWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAVSDPTVGVDFFSRLVEIEGKRIKLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPY-QIVFVLVGHKCDLDTRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYELVKRGEITI------------------- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |