Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Download alignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCC MNKKKKPFLGMPAPLGYVPGLGRGATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQMKKNQAADDDDEDLNDTNYDEFNGYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERREQREKEEIEKYRMERPKIQQQFSDLKRKLAEVTEEEWLSIPEVGDARNKRQRNPRYEKLTPVPDSFFAKHLQTGENHTSVDPRQTQFGGLNTPYPGGLNTPYPGGMTPGLMTPGTGELDMRKIGQARNTLMDMRLSQVSDSVSGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKAVVAQAVRHLPQSVRIYIRAAELETDIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDARIMLSRAVECCPTSVELWLALARLE |
1 | 7ay1A | 0.05 | 0.03 | 1.47 | 0.67 | DEthreader | | --------------------------------NEEQSGDEL--LDV--------------------------------VTVPS--------------------QNLVPHRSYVS-----YSLSRMPN-------------------------------------------------RASSPISHFLDLLSNIVMYAPLLKLKNFKVLGSSVANETFCEIMGFYDVLRRNS-----------------QQLKETGHV------------EGLQKIFSAVQFYQPKIQQFLRALDRTFQIRQFQRSLLNLALLVTVLTSLSK-LLEPSQFVQMLSWTSKICKSCKSLMNLLFSLVSYKSPVILLRDLSQFVAAVCLVLSQAEKVLEVDIQLGTLLTFFHELVTALVDTLLKDLCKYTTSGLTPLCYSFISYVQNKSET-PIPNLIS |
2 | 5o9zG | 0.94 | 0.65 | 18.33 | 1.88 | SPARKS-K | | -----KPFLGMPAPLGYVPGLGRGAT---------------------------------------------------------------------KDDEEADAIYAALDKRMDERRKERREQREKEEIEKYRMERPKIQQQFSDLKRKLAEVTEEEWLSIPEVGDARNKRQRNPRYEKLTPVPDSFFAKHLQTGENHTSVDPRQTQFGGYLTDLNSMIPTHGGDINDI---------------------------------------------------------------KKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKAVVAQAVRHLPQSVRIYIRAAELETDIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDARIMLSRAVECCPTSVELWLALARLE |
3 | 2xm6A | 0.09 | 0.07 | 2.84 | 0.68 | MapAlign | | ---------------------------------------------------------VNLEQLKQKAESGEAKAQLELGYRYFQGNETTKDLTQAMDWFRRAAEQGYTPAEYVLGLRYMNDYAQAVIWYKKAALKGLPQAQQNLGVMYH----------EGNGVKVDKAESVKWFRLAAEQGRDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQGNVWSCNQLGYMYSRGLGVERNDAISAQWYRKSAELGQLHLADMYYFGIGVTQDYTQSRVLFSQSAEQGNSIAPLKALEWYRKSA--EQGNSDGQYYLAHLYDKVKNREQAISWYTKSAEQG--DATAQANLGAIYFHKKAVEWFRKAAA-K-GEKAAQFNLGNALLDEQQAAIWMRKAAE-QG-LSAAQVQLGEIYDYVQAWAWFDTASTND-MNLFGTENRNITE |
4 | 4ui9C | 0.10 | 0.10 | 3.59 | 0.43 | CEthreader | | ----------FSDLREIKKQLLLIAGLTRERGLLHSSKWSAELAFSLPALPLAELQPPPPITEEDAQDMDAYTLAKAYFDVKEYDRAAHFLHGCNSKKAYFLYMYSRYLSGEKKKDDETVDSLGPLEKGQVKNEALRELRVELSKLHQARELDGFGLYLYGVVLRKLDLVVEATHVLPLHWGAWLELCNLITDKEMLKFLSLPDTWMKEFFLAHIYTELQLIEEALQKYQNLIDVGFSKSSYIVSQIAVAYHNIRDIDKALSIFNELRKQDPYRIENMDTFSNLLYVRSMKSELSYLAHNLCEIDKYRVETCCVIGNYYSLRSQHEKAALYFQRALKLNPRYLGAWTLMGHEYNTSAAIQAYRHAIEVNKRDYRAWYGLGQTYEMPFYCLYYYRRAHQLRPNDSRMLVALGECYQLVEAKKCYWRAYAVGDVEKMALVKLAKLH |
5 | 5o9zG | 1.00 | 0.69 | 19.36 | 1.71 | MUSTER | | -----KPFLGMPAPLGYVPGLGRGAT---------------------------------------------------------------------KDDEEADAIYAALDKRMDERRKERREQREKEEIEKYRMERPKIQQQFSDLKRKLAEVTEEEWLSIPEVGDARNKRQRNPRYEKLTPVPDSFFAKHLQTGENHTSVDPRQTQFGG---------------------------------------------------------------YLTDLNSMIPTHGGDINDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKAVVAQAVRHLPQSVRIYIRAAELETDIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDARIMLSRAVECCPTSVELWLALARLE |
6 | 5o9zG | 0.98 | 0.67 | 18.74 | 4.10 | HHsearch | | -----KPFLGMPAPLGYVPGLGRGAT---------------------------------------------------------------------KDDEEADAIYAALDKRMDERRKERREQREKEEIEKYRMERPKIQQQFSDLKRKLAEVTEEEWLSIPEVGDARNKRQRNPRYEKLTPVPDSFFAKHLQTG--------------------------------------------------------------------ENHTSVDPRGYLTDLNSMIPTHGGDINDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKAVVAQAVRHLPQSVRIYIRAAELETDIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDARIMLSRAVECCPTSVELWLALARLE |
7 | 5o9zG | 0.97 | 0.67 | 18.75 | 2.00 | FFAS-3D | | -----KPFLGMPAPLGYVPGLGRGATK---------------------------------------------------------------------DDEEADAIYAALDKRMDERRKERREQREKEEIEKYRMERPKIQQQFSDLKRKLAEVTEEEWLSIPEVGDARNKRQRNPRYEKLTPVPDSFFAKHLQTGENHTSVDPRQTQFGGYLTDLNSMIP---------------------------------------------------------------THGGDINDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKAVVAQAVRHLPQSVRIYIRAAELETDIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDARIMLSRAVECCPTSVELWLALARLE |
8 | 5nrlJ | 0.08 | 0.08 | 3.12 | 1.00 | EigenThreader | | ECPRSSDIWLENIRLHESDVHYCKTLVATAINFNPTSPLLWFKAIDLESTTVNKYRVVRKALQEIPRDEGLWKLAVSFEADAPNSNLTCQAIVYAILEWLREELNNVDQILEKVQIAVLKKLIQWDTVLWSRLKMATESYLLAFFQELLFQTDDMREKSPGLLMMYVSEYWKAQKGDTRQTLVLIDQIIDFAPHNEDFKISGTERLYYKYVNFLRYQDLNEEAIKFLNERCLKSFPICHKFFLQLGQIYHSMIEMSRETYLSGTRLVPNCPLLWVSLSKIDEIDLKNP---VRARSILDRGLLKNPDDVLFYIAKIQMEIRLGNLDQAELLVTQALQKFPSNALLWVEQIKLFKHGTIFQDALRRTQNDHRVLLEIGVSFYAEAQYETSLKWLERALKKCSRYGDTWVWLFRTYARLGKDLYNMFDQCEPTYGPEWIAASKNVK |
9 | 3jcmG | 0.36 | 0.20 | 6.10 | 1.18 | CNFpred | | ----------------------------------------------------------------------------------------------------------TLELKLAQKKKKRANEK------------SNVKRQFADLKESLAAVTESEWMDIPDATDFTRRNKRNRIQEKTYAAPDSLIP-----------------------------------------------GNVDLNKLTEEREKLLQSQIDENL----------------------SLSDATLEDLQKMRTILKSYRKADPTNPQGWIASARLEEKARKFSVAKKIIENGCQ--PRSSDIWLENIRLHEVHYCKTLVATAINFNP---LLWFKAIDLESTTVNKYRVVRKALQEIPRDEGLWKLAVSFEDKAQVIKMLEKATQFIPQSMDLLTAYTNLQ |
10 | 6reyc | 0.05 | 0.03 | 1.62 | 0.67 | DEthreader | | SRPLYDVERYSK------ATAEMLEEWRPL--MQKAI-Y------------------------------------------F-PT-L--ELHHKGFKLWFDELIGLWVLVITRILRSLNLPVPRFLTGR----------------------------------------------E-RKGKDK--FNPRRFCLFKGIFNFD-FLPVL-KP---------HLEHLVAVAIIAGLIRGSKLWL--LALITVETYNDWG------------SFVDACR-LYVLQGGLAQQVELLHRLLKYEEFTARILEKLKGLLTILKWLASA-RSFSTAVTEQLQLLPLFFKIAAKCLLMSQGLLYPHQVPLVLQVLKQTAWAYTVLTYLQTMFYNLFFLAVDIRWLVISLLDVEMAATTLSGLLQCTMDMQHFELHAGVLPPIEMTVKKTLSFL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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