Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540
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| SS Seq | CCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHCCCCCCC MMDSPFLELWQSKAVSIREQLGLGDRPNDSYCYNSAKNSTVLQGVTFGGIPTVLLIDVSCFLFLILVFSIIRRRFWDYGRIALVSEADSESRFQRLSSTSSSGQQDFENELGCCPWLTAIFRLHDDQILEWCGEDAIHYLSFQRHIIFLLVVVSFLSLCVILPVNLSGDLLDKDPYSFGRTTIANLQTDNDLLWLHTIFAVIYLFLTVGFMRHHTQSIKYKEDPEDICWKNLSIQGLRWWLQWLGINFTLFLGLFFLTTPSIILSTMDKFNVTKPIHALNNPIISQFFPTLLLWSFSALLPSIVYYSTLLESHWTKSGENQIMMTKVYIFLIFMVLILPSLGLTSLDFFFRWLFDKTSSEASIRLECVFLPDQGAFFVNYVIASAFIGNGMELLRLPGLILYTFRMIMAKTAADRRNVKQNQAFQYEFGAMYAWMLCVFTVIVAYSITCPIIAPFGLIYILLKHMVDRHNLYFVYLPAKLEKGIHFAAVNQALAAPILCLFWLYFFSFLRLGMKAPATLFTFLVLLLTILVCLAHTCFGCFKHLSPLNY |
1 | 6oceA | 0.21 | 0.18 | 5.67 | 1.17 | DEthreader | | ---------------------------------------------T--VSDIGLSAAINVSMAVAFLLVFAFLRLQPINDRVYFP-K--W---------------------KFLSWMPAALKMPEDELINHAGLDSAVYLRIYLTGIKIFVPISILASLVLFPVNWTNDTLDSMSKIDKLS-ISNIPYGSNRFVTHLVMAYAVTFWTCYVLFREYEIITRFLDPEDVYWNNLSIPFVSLTVRRLIVAVAFFFLNFFYVIPIAFVQSLASLEGIKFLIDVIKSFIQGFLPGIALKVFLILLPTILMFMSKFEGLISQSSLERRSASKYYIFLFFNVFLGSIVTGSALDQLKAYQSANEI--PR--TIGVAIPMRATFFITYVMVDGWTGVAGEILRLRALIIFHLKNFVKTEK-DREEAM-DPG-SICFDWCEPRIQLYFLLGLVYAVVTPLLLPFILVFFGLAYVVYRHQIINVYNQQYEGAQFWPSVHGRIIIALIVSQLLLIGLLSTK-GFEE-TTPVLVVLPVLTFWFYKYCKNRFEPAFVRNPLA |
2 | 5z1fA | 0.18 | 0.15 | 4.97 | 3.00 | SPARKS-K | | ----------------------------------------------FGSFLVSLGTSFVIFVILMLLFTWLSRK------------SGNAPIYYPNRILKGLEPWETSLTRNPFAWMREALTSSEQDVVNLSGVDTAVHFVFLSTVLGIFACSSLLLLPTLLPL-----SMAN------------ITKKSSRLWAFLGAVYWISLVTYFFLWKAYKHVSSLRSADAILVRDMPAPTQKEFIDSYFREILLWQNLNIKLFSRIIRQYFIYFFVAVTILFPIAFVSESFLPQIALIVFLAMLPKLLLFLSKAEGIPSQSHAIRAASGKYFYFSVFNVFIGVTLAGTLF-----------NTDMIINLLATSLPKSATFFLTYVALKFFIGYGLELSRIIPLIIFHLKKKYLCKTEAEVK-EAWYPGDLSYATRVPGDMLILTITFCYSVIAPLILIFGITYFGLGWLVLRNQALKVYVPSYESGRMWPHIHQRILAALFLFQVVMFGYLGAKTFF---YTALVIPLIITSLIFGYVCRFYGGFEHTALEVA |
3 | 5yd1A | 0.17 | 0.13 | 4.35 | 1.74 | MapAlign | | ------------------------------------------------LKDIGVSAGINILTAFIFFIIFAFLRLQPFNDRV-----------------------YFSKWLKFLHWMPEALKMPERELIDHAGLDSVVYLRIYWLGLKIFAPIAMLAW-AVLVP-----------------------VNSNRFWAHIIMAYAFTIWTCYMLMKEYETVANMREPRDIYWPNLAIPYVSLTVRRLVMNVAFFFLTFFFIIPIAFVQSLAT----------IKSLIQGLLAGIALKLFLIFLPAILMTMSKFEGFTSVSFLERRSASRYYIFNLVNVFLGSVIAGAAFEQ--------------LKTIGMAIPMKATFFITYIMVDGWAGVAGEILMLKPLIIYHLKNA-------FEEAM--NPGSIGFNTGEPQIQLYFLLGLVYAPVTPMLLPFILVFFALAYVVYRHQIINVYNQEYESAAFWPDVHGRVITALIISQLLLMGLLGTKHA--ASAAPFLIALPVITIGFHRFCKGRFEPAFVRYPL- |
4 | 5yd1A | 0.18 | 0.14 | 4.44 | 1.03 | CEthreader | | ----------------------------------------------LKDIGVSAGINILTAFIFFIIFAFLRLQPFN-------------------------DRVYFSKWLKFLHWMPEALKMPERELIDHAGLDSVVYLRIYWLGLKIFAPIAMLAWAVLVPVNS------------------------NRFWAHIIMAYAFTIWTCYMLMKEYETVANMREPRDIYWPNLAIPYVSLTVRRLVMNVAFFFLTFFFIIPIAFVQSLATI----------KSLIQGLLAGIALKLFLIFLPAILMTMSKFEGFTSVSFLERRSASRYYIFNLVNVFLGSVIAGAAFEQLK--------------TIGMAIPMKATFFITYIMVDGWAGVAGEILMLKPLIIYHLKNAFEE---------AMNPGSIGFNTGEPQIQLYFLLGLVYAPVTPMLLPFILVFFALAYVVYRHQIINVYNQEYESAAFWPDVHGRVITALIISQLLLMGLLGTKHAAS------AAPFLIALPVITIGFHRFCKGRFEPAFVR |
5 | 6oceA | 0.21 | 0.19 | 5.89 | 1.65 | MUSTER | | ---------------------------------------------TVSDIGLSAAINVSMAVAFLLVFAFLRLQPIN------------DRVYFPKWL-------NMRSYLKFLSWMPAALKMPEDELINHAGLDSAVYLRIYLTGIKIFVPISILASLVLFPVNWTNDTLDVVHSKIDKLSISNIPYGSNRFVTHLVMAYAVTFWTCYVLFREYEIITTMPEPRDVYWNNLSIPFVSLTVRRLIVAVAFFFLNFFYVIPIAFVQSLASLEGIEKAIDVIKSFIQGFLPGIALKVFLILLPTILMFMSKFEGLISQSSLERRSASKYYIFLFFNVFLGSIVTGSALDQLKAYIHQSAN--EIPRTIGVAIPMRATFFITYVMVDGWTGVAGEILRLRALIIFHLKNFFLVKTE-KDREEAMDPGSICFDWCEPRIQLYFLLGLVYAVVTPLLLPFILVFFGLAYVVYRHQIINVYNQQYESAQFWPSVHGRIIIALIVSQLLLIGLLSTKGFEE----TTPVLVVLPVLTFWFYKYCKNRFEPAF-VRN |
6 | 6oceA | 0.23 | 0.20 | 6.18 | 6.52 | HHsearch | | ---------------------------------------------TVSDIGLSAAINVSMAVAFLLVFAFLRLQPIN----D--------RVYFPKWL-------NMRSYLKFLSWMPAALKMPEDELINHAGLDSAVYLRIYLTGIKIFVPISILASLVLFPVNWTNDTLDVVHSKIDKLSISNIPYGSNRFVTHLVMAYAVTFWTCYVLFREYEIITTMREPRDVYWNNLSIPFVSLTVRRLIVAVAFFFLNFFYVIPIAFVQSLASLEGIEPLIDVIKSFIQGFLPGIALKVFLILLPTILMFMSKFEGLISQSSLERRSASKYYIFLFFNVFLGSIVTGSALDQLKAYIHQANE---IPRTIGVAIPMRATFFITYVMVDGWTGVAGEILRLRALIIFHLKNFFVKTEKDRE--EAMDPGSICFDWCEPRIQLYFLLGLVYAVVTPLLLPFILVFFGLAYVVYRHQIINVYNQQYESAQFWPSVHGRIIIALIVSQLLLIGLLSTKGFE--ETTPVLVVLPVLTFWF--YKYCKNRFEPAFVRNP |
7 | 5z1fA | 0.19 | 0.16 | 5.05 | 3.67 | FFAS-3D | | ----------------------------------------------FGSFLVSLGTSFVIFVILMLLFTWLSRKSGNAPIYYPN-----------RILKGLEPWEGTSLTRNPFAWMREALTSSEQDVVNLSGVDTAVHFVFLSTVLGIFACSSLLLLPTLLPLSMANITKKSS-------------RLWAFLGAVYWISLVTYFFLWKAYKHVSSLVTEAPEPRQLLWQNLNIKLFSRIIRQYFIYFFVAVTILFYMIPIAFVSAITR------------TVLESFLPQIALIVFLAMLPKLLLFLSKAEGIPSQSHAIRAASGKYFYFSVFNVFIGVTLAGTL-----------FNTDMIINLLATSLPKSATFFLTYVALKFFIGYGLELSRIIPLIIFHLKKKYLCK-TEAEVKEAWYPGDLSYATRVPGDMLILTITFCYSVIAPLILIFGITYFGLGWLVLRNQALKVYVPSYESYGRMWPHIHQRILAALFLF-QVVMFGYLGAKTF---FYTALVIPLIITSLIFGYVCRQKFYGGTALE- |
8 | 6oceA | 0.15 | 0.12 | 4.14 | 1.70 | EigenThreader | | -----------------------------------------------TVSDIGLSAAINVSMAVAFLLVFAFLRLQPIN-------DRVYFPKWLNMRSYLKFLSWMPAALKMPEDELINHAGLY---------------LTGIKIFVPISILASLVLFPVNWTNDTLDSMKVVHSKIDKLSISNIPYGSNRFVTHLVMAYAVTFWTCYVLFREYEIITTMRLRFLASEKRRSIPFVSLTVRRLIVAVAFFFLNFFYVIPIAFVQ----SLASV-----IKSFIQGFLPGIALKVFLILLPTILMFMSKFEGLIS----QSSLERRSASKYYIFLFFNVFLGSIVTGSALDQLVAIPMR--------------ATFFITYVMVDGWTGVAGEILRLRALIIFHLKNFFLVKDREEA----MDPGSICFDWCEPRIQLYFLLGLVYAVVTPLLLPFILVFFGLAYVVYRHQIINVNQQYESGAQFWPSVHGRIIIALIVSQLLLI------GFEET----TPVLVVLPVLTFWFYKYCKNRFEPAFVRNP |
9 | 5yd1A | 0.19 | 0.15 | 4.69 | 2.14 | CNFpred | | -----------------------------------------------KDIGVSAGINILTAFIFFIIFAFLRLQPF----NDRVYFSKW---------------------LKFLHWMPEALKMPERELIDHAGLDSVVYLRIYWLGLKIFAPIAMLAWAVLVPVN------------------------SNRFWAHIIMAYAFTIWTCYMLMKEYETVANM-EPRDIYWPNLAIPYVSLTVRRLVMNVAFFFLTFFFIIPIAFVQSLAT----------IKSLIQGLLAGIALKLFLIFLPAILMTMSKFEGFTSVSFLERRSASRYYIFNLVNVFLGSVIAGAAFEQL---------------TIGMAIPMKATFFITYIMVDGWAGVAGEILMLKPLIIYHLKNAF----------EAMNPGSIGFNTGEPQIQLYFLLGLVYAPVTPMLLPFILVFFALAYVVYRHQIINVYNQEYEAAAFWPDVHGRVITALIISQLLLMGLLGTKHAA--SAAPFLIALPVITIGFH--RFCKGRFEPAFVRYP |
10 | 5z1fA | 0.18 | 0.15 | 4.74 | 1.17 | DEthreader | | -----------------------------------------------F-GSFLVSLGTSFVIFVILMLLFTWLSRKSGNAPIYYPNRI-L--KGL---------EPWEGTSLRNAWMREALTSSEQDVVNLSGVDTAVHFVFLSTVLGIFACS-SLLLLPTLLPL----S---M-----A----NITKKSSRLWAFLGAVYWISLVTYFFLWKAYKHVSRALEPEQLLWQNLNIKLFSRIIRQYFIYFFVAVTILFYMIPIAFVSAIT-----------RT-VLESFLPQIALIVFLAMLPKLLLFLSKAEGIPSQSHAIRAASGKYFYFSVFNVFIGVTLAGTLFN--T---------DMIINLLATSLPKSATFFLTYVALKFFIGYGLELSRIIPLIIFKKYLCTEAEV-KE--AW--YPGDLSYATRVPGDMLILTITFCYSVIAPLILIFGITYFGLGWLVLRNQALKVYVPSYSYGRMWPHIHQRILAALFLFQVVMFGYLGAKT---FFYTALVIPLIITSLIFGYVCRQKFYGGFEHTALV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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