Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480
| | | | | | | | | | | | | | | | | | | | | | | | |
| SS Seq | CCHHHHHHHHHHHHHHHHCCSSSHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCSSSSCSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCSSSCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GQGLVDQVEASVEEAISSGTWVDIAPLLPTSLSVEDAAILLQQVMRAFSKQASTVVFSDTVVVSEKFINDCTELFRELMHQKAEKEMKNNPVHLITEEDLKQISTLESVSTSKKDKKDERRRKATEGSGSMRGGGGGNAREYKIKKVKKKGRKDDDSDDESQSSHTGKKKPEISFMFQDEIEDFLRKHIQDAPEEFISELAEYLIKPLNKTYLEVVRSVFMSSTTSASGTGRKRTIKDLQEEVSNLYNNIRLFEKGMKFFADDTQAALTKHLLKSVCTDITNLIFNFLASDLMMAVDDPAAITSEIRKKILSKLSEETKVALTKLHNSLNEKSIEDFISCLDSAAEACDIMVKRGDKKRERQILFQHRQALAEQLKVTEDPALILHLTSVLLFQFSTHSMLHAPGRCVPQIIAFLNSKIPEDQHALLVKYQGLVVKQLVSQSKKTGQGDYPLNNELDKEQEDVASTTRKELQELSSSIKDLVLKSRKSSVTEE |
1 | 4y21A | 0.10 | 0.09 | 3.20 | 1.18 | FFAS-3D | | GKERFVKLLDQLHNSLRID-LSMYRNNFPAS-SPERLQDLLTSITFFRMKVQE-------LQSPPRASQVVKDCVKACLNSTYEYIFNN------CHELYGR--------------------------------------EYQTDPAKKGEVPPEEQGPSIKNLD-------FWSKLITLIVSIIEEDKNSYTPNVGKISAEVMWSLFAQDMKYAMEEHDKHRLCK------SADYMNLHFKVKWLYNEYAWFEPFVIQWLDENEEVSRDFLLECSVVDVFSQLNQSFEIIKKLECP-----DPQIVGHYMRRFAKTISNVLLQYADIVSKDNTQQLRVQLEKMFEAMGG---KELDAEASGTLKELQVKLNNVLDELTSFQPHIEECVRQMGDILSQVKGTGNVDLLDSNLTLFAKICEKTVLKVLKELWKLVMNTMERTIVLPPEFSKLKDHMVREEAKSLTPKQCAVVELALDTIKQY-FHAGGVGLKKT |
2 | 4hb2C | 0.11 | 0.09 | 3.28 | 1.04 | CNFpred | | VIDTEEIMISKLARQIDGWSWHNIN-SISGTMSEDTEKRFVVTVIKDLLKDNKAVVASDIMYVYPRFLKAHWNFLRTVILKLFIKIVQKCKYHFVIQQPRESE------------------------------------------------------------------------PFIQTIIRDIQKTTADLVHTFYKACGIIIRNRLLSDLMQLPNMAWDTIVEQSTANPTLLLDSETVKIIANIIKTNVAVCTSMGADFYPQLGHIYYNML-QLYRAVSSMISAQVAAEGLIATKTPKRGLRTIKKEILKLVE-LVEPLLNAVLEDYMNNRDAEVLNCMTTVVEKVGHM----IPQGVILILQSVFECTLDMINK-PEHRVEFYKLLKVINEKSFAAFLELPPAAFKLFVDAICWAFKHNNRDVEVNGLQIALDLVKNIERMGNVP-------------FANEFHKNYFFIFVSETFFVLTDSDHKSGFSK |
3 | 4knhA | 0.07 | 0.06 | 2.56 | 1.24 | MapAlign | | KLEALQALHAELVAVRRFEGLLALGKEPEYSLNEDFVNDCLKLADELDLNEILGDVETQSRPLWCGVIRFHQ-ERKYLLDCMRLILEI----------------------------------------AADEDIDAGLQESFGVAAEDKIFGIPPPWERQVKKFIPRCMEAMKGVRMLQCMADKANARNRPLNQETLDFSR-LSLVEQHECLASILHAAVQDKYDHFLIHLIPVLAAYITEFVLGAAVRAWWIAEHNGFYLLDEEDEQRTKQFLDALKGAFDFILSVAADCKARQWLQRKIFSHFLQHSLMVHLEQDMDLERFLIIIFWEDSNLAGFLQPLVSAFCEM-LRCLADNEECATAAHNFLWSQIFKELEYFESALMLECYLRLIAKLATESARPHRLRACIFYVLKALMIRKTHEELDAMQSNAFIQLLTTLLVPPFPEWLGSSIRTLGIEPYVDFVFDVFRILRLSCLDFVMVCLVTFNEDLIVL |
4 | 1vt4I | 0.12 | 0.11 | 3.92 | 1.03 | HHsearch | | YKDILSVFEDAFVDNFDCK---DVQDMPKSILSKEEIDHIIMSVSGTLRL--FWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTE-QRQPSMMMYIEQRDRLY-NDNQVFAKYNV--SRLQPYL------KL---RQARPA--KNVLIDGVL--GSGKDVCLSYDFKILNLKNCNSPETVLEMLQKLDPNWRSDHSSNIKLRIH-SIQAELRRLLKSPYENCLVLLNVQNAK-AWNAFNCKIVTDFLSAALDHHSMTLTPDEVKSLLLKYLLTTNPRRLSIIAESIRD--GLATWDNWKHVNCDKLTTIINVLPAEYRKMFD----RLSVFPPSAHIPTILLSLHKYSLVEKQPKESLELKVKLENEYALHRIVDHYLDQYFYSHIGHHLKERMTLFRMVFLDFRFLEQKIRHDSTAWNASG-SILNTLQNAILDFLPKI----EENLICSKYT--------DLLRIALMAEDEAIFEEAHKQVQRGGGGGG |
5 | 5f0jA | 0.10 | 0.09 | 3.31 | 0.77 | CEthreader | | AIQAVKVQSFQMKRCLDKNKLMDLGELRTSMLSPKSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITV-GVVYVKSFPQSRKDIL---------------KDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEPTDEETTGDISDSMDFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQIVLTGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIIIALIDRLALFAHREDGPGIPADIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMKCYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTY---------NNILTVLKLKHFHPLFEYFDYESRKSMSCYVLSNVLDYNTEIVSQDQVDSIMNLVSTLIQ------------------------- |
6 | 5ot4A2 | 0.10 | 0.09 | 3.41 | 0.83 | EigenThreader | | VEKLEQEAAKRGFDSYVQSLS---HNALLAKKNGLEAGFKNSPYKTYLPESEWER---------AQGVLGARYLQAVLSSNALITELKKPALLGPHDYIDKA---VTEENLGSLKKNMMKSFINNIKDETNLKALDALKALDGAKNLDKFKEVLGKLGITPADWVKDTDLKDMKQWARARQFELEINRVSSLGSGAHSKLMSTLTKLAKQLRHLMNHVAEHYLGKNASGIAELLTENKRLEGFRAQVAAINQALTTANSNQATDYKILIDAIKTQSGEMSKQQQIYAEYNSTSNSGEKPVTFSKDIVNRFLRPLKPQDYADTLFGEN---PTNPANKKFKDDLLREL--------TPTVFNEIKNDLRKQELLDSTELESIKGITGPIRTNKLKFINDIDPVHLYNAQMKERYEGLSRDCGLVVDQLRRQVVALEGHLKSLPKEGEFKAAGLTLEQKAEIKKLRTDLEAELSAVREDLDFYKKIQGKLETIVK |
7 | 5ic0A | 0.10 | 0.08 | 2.79 | 1.10 | FFAS-3D | | GQKECDNALRQLETVRELMSYFGCLDSVME--NSKVLGEAMTGISQNAKNGNLPEF--------GDAIATASKALCGFTEAAAQAAYL---------------------------------------------------------------------VGVSDPNSQAGQQGLVEPTQFARANQAIQMACPGCTQAQVLSAATIVAKHTSAQFVQSAKEVLVKTIKALDGDFTEENRAQCRAATAPLLEAVDNLSAFASNPERAAMEPIVISA-KTMLESAGGLIQTARALAVNPR-------DPPRWSVLAGH-SRTVSDSIKKLITSMRDKACETAIAALNSCLRDLDQPREGISQEALHTQMLTAVQEISHLIEPRAEASQLGHKVSQMA-------------QYFEPLTLAAVGAAHPQQMALLDQTKTLLLYTAKEAGGNPKQAA-----HTQEALEEAVQMMTEAVEDLTTTLNEAA----------- |
8 | 5h7cA | 0.17 | 0.12 | 4.02 | 0.82 | SPARKS-K | | --KFNKEQQNAFYEILHLPN-----------LNEEQRNAFIQSLKDDP---------------SANLLAEAKSLNVNQAVKQLAEKAKEATDKEEVIEIVKELAELAKQSTDS--------------------------------------------------------------ELVNEIVKQLAEVAKEADKELVIYIVKILAELAKELVNEIVKQLAEVAKEATDKELVIYIVKILAELAKLVNEIVKQLEEVAKEADKELVEHIEKILEELEQQSAFYEILSL------------PNLNEEQRNAFIQSLKDDVNQAVKQLAEKAKEADKEEVIEIVKELAELAKQS---TD----SELVNEIVKQLAEVAKEATDKELVIYIVKILAELAKQST----DSELVNEIVKQLAEVAKETDKELVIYIVKILAELAKQSTDS----------ELVNEIVKQLEEVAKELVEHIEKILEELKKQS------- |
9 | 4gmxC | 0.13 | 0.10 | 3.62 | 1.04 | CNFpred | | VIDTEEIMISKLARQIDGWSWHNIN-SISGTMSEDTEKRFVVTVIKDLLKDNKAVVASDMYVVGPRFLKAHWNFLRTVILKLFEFMHETHEGVQDM------------------------------------------ACDTFIKIVQKCKYHFVIQQPRESE------------PFIQTIIRDIQKTTADLVHTFYKACGIIILSDLMQLPNMAWDTIVEQSTANP-----------DSETVKIIANIIKTNVAVCTSMGADFYPQLGHIY--YNMLQLYRAVSSMISAQVAAEGLIATRGLRTIKKEILKLVE-LVEPLLNAVLEDYMNNRDAEVLNCMTTVVEKVGHMIP----QGVILILQSVFECTLDMINK-PEHRVEFYKLLKVINEKSFAAFLELPPAAFKLFVDAICWAFKHNNRDVEVNGLQIALDLVKNIERMGNVP-------------FANEFHKNYFFIFVSETFFVLTDSDHKSGFSK |
10 | 6sytA | 0.09 | 0.05 | 2.03 | 0.67 | DEthreader | | VALLSKNLMIVH---------SDLAVHFPA-IQYAVLYTLYCFIILNLLGILKKDLNQDTRLKGANLVEQEISLALRSHMSKAPSNTFHPFSDVISFILY-GNS--------------------------------------------------------------HRTNWLRLFYSCQRLDKTI--------------PR-NLLKT-DAVLWQWAIVLLLQYLEEWLRIRLSIMRVGLLAGQ-----------------------------------P--AVTVRHGFDLLTEMK-ALLCEAIQGIAVWSSS--I---NL-LWINSVAQRKASVEYQEHLCMSSPEVINYLGNNLKADFNYISLKEVLLLQLYCALIPLFSAPWMQALRYTMY------GAAKFARLATRLLAQCSE-----------KWGPELS-KAEYAAPEVATKLNA----------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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