Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCC PSQGNGFDPELYEGGRKGYGDFSRYDEGSGGSGDEGRDEAHKREWNLFYQKQMQLRKGKDPKIEEFVPPEKYTGEEDGAGGHSPAPPQTEECLRERPSTCPPRDQGTPEVQPTPAKDTWKGKRPRSQQENPESQPQKRPRPSAKPSVVAEVKGSVSASEQGTLNPTAQDPFQLSAPGVSLKEAANVVVKCLTPFYKEGKFASKELFKGFARHLSHLLTQKTSPGRSVKEEAQNLIRHFFHGRARCESEADWHGLCGPQR |
1 | 1vt4I | 0.10 | 0.10 | 3.81 | 0.51 | CEthreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
2 | 4ui9O | 0.06 | 0.06 | 2.66 | 0.63 | EigenThreader | | HWKHSLSELIDISIAQKTAIWRLYGRSTMALQQAQMLLSMESFAVALCHLAELHAEQGCFAAASEVLKHLKERFPPNSQHAQLWMLCDQKIQFDRAMNDGKYHLADSLVTGITALNSIEGVYRKAVVLQAQNQCQKLKNTEMVISVLLSVAELYWRSSSPTIALPMLLQALALSKEYRLQYLASETVLNLAFAQLILG--IPEQALSLLHMAIEPILADGAILDKGRAMFLVAKCQVASAASYDQPKKAEALEAAIENL |
3 | 2akhY | 0.13 | 0.12 | 4.31 | 0.54 | FFAS-3D | | -SFISGIMPYISASITVVHPTLAEIKK----EGESGRRKISQYTLAIFQSIGIATGLPNMPGMQGLVINPGFAFTERGIGNGISIIIFAGIVAGLPPAIAHTIEQARQGDLHIVVNYAKRQQGRRVYAAQSTHLPLKVNMAGVIPAIFASSIILFGGGTGWNWLTTISLYLQPGQPLYVLLYASAIIFFCFFPGIRPGEQTAKYIDKLIPEFMRDAMKVPFYFGGTSLLIVVVVIMDFMAQVQTLMMSSQYESALKK-- |
4 | 5yfpA | 0.05 | 0.04 | 2.07 | 0.87 | SPARKS-K | | GQDISHDQMIRILTTLLIFSPLILFCKEISQKSYQAIVENWNVSIQPVYMELWTKKISQLQG----------IDTNDEKMNELSLSQLLNEWDTFRKERKTNDINPVFKNSFSLLTECLQTMRQECIVYHISSKHNFEEYFNDPDAPPILLDTVKVMQSDREAAVIETQLVS-RIFQPIVTRLSSYFVELVKA----EPTVAP----ALTFYLENEIKSLESSNHEFLLSAVTRMYTQIKQVWQVLHFER-ISNATTNG |
5 | 2a7oA | 0.32 | 0.07 | 2.21 | 0.56 | CNFpred | | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RKEMSQFIVQCLNPYRKVGRITTTEDFKHLARKLTHGVMNKE--NENVKHKTKEYIKKYMQ------------------- |
6 | 3pyaA | 0.04 | 0.03 | 1.55 | 0.83 | DEthreader | | LSGWGDAYLFSYHDRIMPGFEVAKLKLTRIPKEMHPTTLLHSLLFSPSSTA--------FNGGVPNVFVCWDIDTAVFNFKFCNQAVLKRLPGEFFIDYNQ--QLWDFQYERLSEW------------------------------YAAIFESE-----------S-ERMWAKSVKAILAGVLIGTLNQMSFDLFMSHGRD----VNNLLYLSWGDWMEKWGDEGELMVKMIILMDLTNFFT----------------- |
7 | 6vbu8 | 0.07 | 0.07 | 2.87 | 0.79 | MapAlign | | KTALDLAALSTEHSQYKDWWWKVQIGKCYYRLGLYREAEKQFKSATFLYLAKVYISLDQPLTALNLFKQGLDKFPGEVTLLCGIARIYEEMNNISSATEYYKEVLKQDNTHVEAIACIGSNHFYTDQPEVALRFYRRLLQMGVYNCQLFNNLGLCCFYAQQYDMTLTS-FERALSLAENEEEVADVWYNLGHVAVGTGDTNLAHQCFRLAAYNNLAVLEMRGHVEQAKALLQTASSLFATISDKIGDLQRSYAAAKKSE |
8 | 5cwpA | 0.17 | 0.15 | 4.94 | 0.62 | MUSTER | | MSSDEEEARELIERAKEAAERAQEAAE----RTGDPRVRELARELKRLAQEAAEEVK-RDPSSSDVNEALKLIVEAIEAAVRALEAAERT---------------GDPEVRELARELVRLAVEAAEEQRNPSSSD-------VNEALKLIVEAIEAAVRALEAAERTGDPEVRELARELVRLAVEAAEEVQNPSSEEVNEALKKIVKAIQEAVESLREAEESGDPEKREKARERVREAVERAEEVRDPSGWLE------ |
9 | 2c5zA | 0.15 | 0.05 | 1.56 | 1.31 | HHsearch | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------VSQ--SQRLEHNWNKFFASFVPNLIKKNPQSKQF-DHENIKQCAKDIVKILTTKKDLTKGKRHKVKEFINSYMDILKKKQKKA---------- |
10 | 3azoA | 0.09 | 0.09 | 3.39 | 0.46 | CEthreader | | DGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLI-VATDRTGWWNLHRVDPATQLCRREEEFAGPLWTPGRWFAPLANGLIAVVHGKGAAVLGILDPESGELVDA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
|