Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| SS Seq | CCSSSSSCCCCCCHHHHHHHHHHHCCCCSSSSCCHHHHHHHHHHHHHHCCCCSSSSCCCCCHHHHHHHHHHHHHCCCCSSSSSSCHHHCCCHHHHHHHHHHHHCCCCCSSSSSCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCSSSSCCCCCHHHHHHHHHHCCCCCCCSSSSCCCCCCCCSSSSCCCCCCCCCCCCC NKDVFVCMPTGAGKSLCYQLPALLAKGITIVVSPLIALIQDQVDHLLTLKVRVSSLNSKLSAQERKELLADLEREKPQTKILYITPEMAASSSFQPTLNSLVSRHLLSYLVVDEAHCVSQWGHDFRPDYLRLGALRSRLGHAPCVALTATATPQVQEDVFAALHLKKPVAIFKCGLLDEDGSEPLPGPRGEVPGGSAH |
1 | 5lb3B | 0.88 | 0.81 | 22.74 | 1.33 | DEthreader | | NKDVFVCMPTGAGKSLCYQLPALLAKGITIVVSPLIALIQDQVDHLLTLKVRVSSLNSKLSAQERKELLADLEREKPQTKILYITPEMAASSSFQPTLNSLVSRHLLSYLVVDEAHCVSQGHDFRP-DYLRLGALRSRLGHAPCVALTATATPQVQEDVFAALHLKKVAIFKTPC-DKANRDG---------G----- |
2 | 5lb3B1 | 0.99 | 0.87 | 24.47 | 1.81 | SPARKS-K | | NKDVFVCMPTGAGKSLCYQLPALLAKGITIVVSPLIALIQDQVDHLLTLKVRVSSLNSKLSAQERKELLADLEREKPQTKILYITPEMAASSSFQPTLNSLVSRHLLSYLVVDEAHCVSQWGHDFRPDYLRLGALRSRLGHAPCVALTATATPQVQEDVFAALHLKKPVAIFKTP----------------------- |
3 | 5lb3B | 0.86 | 0.86 | 24.18 | 0.55 | MapAlign | | NKDVFVCMPTGAGKSLCYQLPALLAKGITIVVSPLIALIQDQVDHLLTLKVRVSSLNSKLSAQERKELLADLEREKPQTKILYITPEMAASSSFQPTLNSLVSRHLLSYLVVDEAHCVSQWGHDFRPDYLRLGALRSRLGHAPCVALTATATPQVQEDVFAALHLKKVAIFKTKALGQEADKGLSGCGIVYCRTREA- |
4 | 5lb3B1 | 0.99 | 0.87 | 24.47 | 0.41 | CEthreader | | NKDVFVCMPTGAGKSLCYQLPALLAKGITIVVSPLIALIQDQVDHLLTLKVRVSSLNSKLSAQERKELLADLEREKPQTKILYITPEMAASSSFQPTLNSLVSRHLLSYLVVDEAHCVSQWGHDFRPDYLRLGALRSRLGHAPCVALTATATPQVQEDVFAALHLKKPVAIFKTP----------------------- |
5 | 5lb3B1 | 0.99 | 0.87 | 24.47 | 1.54 | MUSTER | | NKDVFVCMPTGAGKSLCYQLPALLAKGITIVVSPLIALIQDQVDHLLTLKVRVSSLNSKLSAQERKELLADLEREKPQTKILYITPEMAASSSFQPTLNSLVSRHLLSYLVVDEAHCVSQWGHDFRPDYLRLGALRSRLGHAPCVALTATATPQVQEDVFAALHLKKPVAIFKTP----------------------- |
6 | 5lb3B | 0.89 | 0.89 | 25.14 | 1.07 | HHsearch | | NKDVFVCMPTGAGKSLCYQLPALLAKGITIVVSPLIALIQDQVDHLLTLKVRVSSLNSKLSAQERKELLADLEREKPQTKILYITPEMAASSSFQPTLNSLVSRHLLSYLVVDEAHCVSQWGHDFRPDYLRLGALRSRLGHAPCVALTATATPQVQEDVFAALHLKKPVAIFKTPCFRNLFKELISDPYGNADKGLSC |
7 | 5lb3B1 | 0.99 | 0.87 | 24.47 | 2.85 | FFAS-3D | | NKDVFVCMPTGAGKSLCYQLPALLAKGITIVVSPLIALIQDQVDHLLTLKVRVSSLNSKLSAQERKELLADLEREKPQTKILYITPEMAASSSFQPTLNSLVSRHLLSYLVVDEAHCVSQWGHDFRPDYLRLGALRSRLGHAPCVALTATATPQVQEDVFAALHLKKPVAIFKT------------------------ |
8 | 5lb3B | 0.88 | 0.88 | 24.86 | 0.70 | EigenThreader | | NKDVFVCMPTGAGKSLCYQLPALLAKGITIVVSPLIALIQDQVDHLLTLKVRVSSLNSKLSAQERKELLADLEREKPQTKILYITPEMAASSSFQPTLNSLVSRHLLSYLVVDEAHCVSQWGHDFRPDYLRLGALRSRLGHAPCVALTATATPQVQEDVFAALHLKKPVAIFKTPISDPYGNLKDFCLKALGQEADKG |
9 | 5lb8A | 0.98 | 0.87 | 24.48 | 1.77 | CNFpred | | NKDVFVCMPTGAGKSLCYQLPALLAKGITIVVSPLIALIQDQVDHLLTLKVRVSSLNSKLSAQERKELLADLEREKPQTKILYITPEMAASSSFQPTLNSLVSRHLLSYLVVDEAHCVSQWGHDFRPDYLRLGALRSRLGHAPCVALTATATPQVQEDVFAALHLKKPVAIFKTPC---------------------- |
10 | 4cdgA | 0.40 | 0.36 | 10.74 | 1.33 | DEthreader | | GEDCFILMPTGGGKSLCYQLPACVSPGVTVVISPLRSLIVDQVQKLTSLDIPATYLTGDKTDSEATNIYLQLSKKDPIIKLLYVTPEKICANRLISTLENLYERKLLARFVIDEAHCVSQGHDFRQ-DYKRMNMLRQKFPSVPVMALTATANPRVQKDILTQLKILRPQVFSMSNRHNIFCHV--------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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