Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| SS Seq | CHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSHHHHHHHHCCCHHHHHHHHHHHHHCCCCSSSSCCCSSSSSSSSSCCCHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCSSSSSHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCSSSSSCCCSSSSSCCCCCCHHHHHHHHHHHHHHHHHCC DFLAVKRLVQRVFPACTCTCTRPPSEQEGAVGGERPVPKYPPQEAEQLSHQAAPGPRRVCMGHERALPIQLTVQALDMPEEAIETLLCYLELHPHHWLELLATTYTHCRLNCPGGPAQLQALAHRCPPLAVCLAQQLPEDPGQGSSSVEFDMVKLVDSMGWELASVRRALCQLQWDHEPRTGVRRGTGVLVEFSELAFHLRSPGDLTAEEKDQICDFLYGRVQARE |
1 | 5lstA2 | 0.41 | 0.30 | 8.73 | 0.83 | DEthreader | | HDSTDFLAVKRLVQ-F-A-------------------RRV--------------------CMGHERALPILTVQALDMPEEAIETLLCYLEL-HPHHWLELLA--THCRLNCPGGPAQLQALAH-RCPPLAVCLAQQ-L------SVEFDMVKLVDSM-GWELASVRRALCQLQWD--------GTGVLVEFSELAHLRSPDLTEEKDQICDFLYGRVQARERQAR |
2 | 5lstA | 0.92 | 0.78 | 22.00 | 1.67 | SPARKS-K | | DFLAVKRLVQRVFPACTCTCEQLSHQAAPGPRRV-------------------------CMGHERALPIQLTVQALDMPEEAIETLLCYLELHPHHWLELLATTYTHCRLNCPGGPAQLQALAHRCPPLAVCLAQQLS---------VEFDMVKLVDSMGWELASVRRALCQLQWDHEPRTGVRRGTGVLVEFSELAFHLRSPGDLTAEEKDQICDFLYGRVQARE |
3 | 5lstA2 | 0.97 | 0.82 | 23.07 | 1.82 | MapAlign | | DFLAVKRLVQRVFPACTCTCEQ-------------------------LSHQAAPGPRRVCMGHERALPIQLTVQALDMPEEAIETLLCYLELHPHHWLELLATTYTHCRLNCPGGPAQLQALAHRCPPLAVCLA---------QQLSVEFDMVKLVDSMGWELASVRRALCQLQWDHEPRTGVRRGTGVLVEFSELAFHLRSPGDLTAEEKDQICDFLYGRVQAR- |
4 | 5lstA | 0.98 | 0.83 | 23.31 | 2.11 | CEthreader | | DFLAVKRLVQRVFPACTCTCEQL-------------------------SHQAAPGPRRVCMGHERALPIQLTVQALDMPEEAIETLLCYLELHPHHWLELLATTYTHCRLNCPGGPAQLQALAHRCPPLAVCLAQQ---------LSVEFDMVKLVDSMGWELASVRRALCQLQWDHEPRTGVRRGTGVLVEFSELAFHLRSPGDLTAEEKDQICDFLYGRVQARE |
5 | 5lstA2 | 0.99 | 0.84 | 23.55 | 0.58 | MUSTER | | DFLAVKRLVQRVFPACTCTC-------------------------EQLSHQAAPGPRRVCMGHERALPIQLTVQALDMPEEAIETLLCYLELHPHHWLELLATTYTHCRLNCPGGPAQLQALAHRCPPLAVCLAQ---------QLSVEFDMVKLVDSMGWELASVRRALCQLQWDHEPRTGVRRGTGVLVEFSELAFHLRSPGDLTAEEKDQICDFLYGRVQARE |
6 | 5lstA | 0.97 | 0.83 | 23.19 | 2.79 | HHsearch | | DFLAVKRLVQRVFPACTCTCEQLS-------------------------HQAAPGPRRVCMGHERALPIQLTVQALDMPEEAIETLLCYLELHPHHWLELLATTYTHCRLNCPGGPAQLQALAHRCPPLAVCLAQQ---------LSVEFDMVKLVDSMGWELASVRRALCQLQWDHEPRTGVRRGTGVLVEFSELAFHLRSPGDLTAEEKDQICDFLYGRVQARE |
7 | 5lstA2 | 0.97 | 0.82 | 23.07 | 1.34 | FFAS-3D | | DFLAVKRLVQRVFPACTCTCEQLSH-------------------------QAAPGPRRVCMGHERALPIQLTVQALDMPEEAIETLLCYLELHPHHWLELLATTYTHCRLNCPGGPAQLQALAHRCPPLAVCLAQQLS---------VEFDMVKLVDSMGWELASVRRALCQLQWDHEPRTGVRRGTGVLVEFSELAFHLRSPGDLTAEEKDQICDFLYGRVQARE |
8 | 5lstA | 0.64 | 0.53 | 15.04 | 1.33 | EigenThreader | | DFLAVKRLVQRVFPACTCTCEQLSH--------------------------QAAPGPRRVCMGHRALPIQLTVQALDMPEEAIETLLCYLELHPHHWLLATT--YTHCRLNCPGGPAQLQALAHRCPPLAVCLAQQLS---------VEFDMVKLVDSMGWELASVRRALCQLQWDEPRTGV---RGVLVEFSELAFHLRSPGDLTAEEKDQICDFLYGRVQARER |
9 | 5lstA | 1.00 | 0.85 | 23.79 | 2.03 | CNFpred | | DFLAVKRLVQRVFPACTCTC-------------------------EQLSHQAAPGPRRVCMGHERALPIQLTVQALDMPEEAIETLLCYLELHPHHWLELLATTYTHCRLNCPGGPAQLQALAHRCPPLAVCLAQQL---------SVEFDMVKLVDSMGWELASVRRALCQLQWDHEPRTGVRRGTGVLVEFSELAFHLRSPGDLTAEEKDQICDFLYGRVQARE |
10 | 5lstA | 0.51 | 0.37 | 10.77 | 0.83 | DEthreader | | HDSTDFLAVKRLVQ-F-A-------------------PRRV-------------------CMGHERLPIQLTVQALDMPEEAIETLLCYLEL-HPHHWLELLA--THCRLNCPGGPAQLQALAH-RCPPLAVCLAQQ-L-------SVEFDMVKLVDSMGWELASVRRALCQLQWD--------GTGVLVEFSELAHLRSPDLTEEKDQICDFLYGRVQARERQAR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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