Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCSSSSSSSSCCCCCCCCCCSSSCCCCCCCCCCSSSSSSCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCSSSSCHHHHHHHHHHHCHHHCCCCCSCCSCCCCCHHHHHHHHHHHHCSSSSSCCCCCSSSSSSSCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCSSSSSSSCCCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MEDSASASLSSAAATGTSTSTPAAPTARKQLDKEQVRKAVDALLTHCKSRKNNYGLLLNENESLFLMVVLWKIPSKELRVRLTLPHSIRSDSEDICLFTKDEPNSTPEKTEQFYRKLLNKHGIKTVSQIISLQTLKKEYKSYEAKLRLLSSFDFFLTDARIRRLLPSLIGRHFYQRKKVPVSVNLLSKNLSREINDCIGGTVLNISKSGSCSAIRIGHVGMQIEHIIENIVAVTKGLSEKLPEKWESVKLLFVKTEKSAALPIFSSFVSNWDEATKRSLLNKKKKEARRKRRERNFEKQKERKKKRQQARKTASVLSKDDVAPESGDTTVKKPESKKEQTPEHGKKKRGRGKAQVKATNESEDEIPQLVPIGKKTPANEKVEIQKHATGKKSPAKSPNPSTPRGKKRKALPASETPKAAESETPGKSPEKKPKIKEEAVKEKSPSLGKKDARQTPKKPEAKFFTTPSKSVRKASHTPKKWPKKPKVPQST |
1 | 6c0fK | 0.25 | 0.12 | 3.73 | 1.47 | SPARKS-K | | -----------------------------AIPRERVIKAVNELIKFTS--KPKNLLEDDEEKDLQLIVVNNKSFKSFKLKLLNVKHSFAVKDFKVLLILKDSDIKKVSE--DDLFDQLDSEGIK-VDEIICGKDLKTVYKAYEARNAFISQFSLILADDSIVTSLPKLMGGKAYNKETTPISIRFSLTTLTNNIKKVYMNQLPVKLPRGTTLNVHLGNLELRPEEFVDNVELISEQLIKAY-----QIRSIFIKTNRSPVLPLYYNQDVLDELE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
2 | 6o0dA | 0.08 | 0.07 | 2.60 | 1.00 | EigenThreader | | KCLKERQVALGFVPQCDEKGNYEPNAIGEEIAG---------------TKTPPGKIPATCQKCHYAVAMVKK----SSAF-----QFNQLKGKRSCHSGVSKTDGWK-----ALVTVLVEKKLLSWDG---------PAKSIQRAMSKFFSVSCIPGAT---------QTNLC---KQCKNSHDEPYYGNYGAFRCLKEDM-------GDVAFLRS---TALS------------------DEHSEVYELLCPLNKYKECNLGTVPAGISDKTEDINNFLMEAQKRLYLGVKLFHAMKALTLEKMKCDDWSAVSGGATEASCPKGCVKQILKGEADATPGSPYTDFGTLRAVALVNKDINWNNIKGKKSGDIAGWVIPVSLIRRQNDNSDIDSFFGSCAPGSDTKSNLCKLCTKCSL---SDKEAYYGNQGATVVFENTDGKNPAVWAKNLKSEDSNYKSCKLRKGFEKDMFQLFSSNKGNNLLFNDNTQ |
3 | 1dwuA | 0.22 | 0.09 | 2.90 | 1.39 | MapAlign | | ------------------------------MDRENILKAVKEARSLA--------KPRNFTQSLDLIINLKELLSNRLKEQVVLPNGRGK-EPKIAVIAK-----------GDLAAQAEEM---GL-TVIRQDELEELGKNKKMAKKIANEHDFFIAQADMMPLVGKTLGPVLGPRGKMPQPVPAN-ANLTPLVERLKKTVLINTRDK-PLFHVLVGNEKMSDEELAENIEAILNTVSRKYEKGLYHVKSAYTKLTMGPPAQIE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
4 | 1g8xA | 0.06 | 0.03 | 1.50 | 0.67 | DEthreader | | ----------------PDERDSEPVFLTYSFPIFAISDVAYRSMLDDRQNFNNRKAYF----FFHHKVEQYIWTFIDFGLDSQ-------------LDEQSV--FP-NATDNTLIKLEFGVYEIDWLEKNKDPLQQDLELCFKDS---VV---------------TKLFNDPNI---ASRAKKG-N---VAAQYKEQLA---------------SLMATLETT--NPH-FVRCILNGVLEGIRITRFPNR-------------KIFFAGLARIEEAREQRLGSEQTKSDYLKRANELVIGDTWSALEKAEQEHAEALRI------------------ELKRQKKIAVLQKNIKLNWATKSVYLGSNETGDSIT------------------------------K--LLAELERL----------------------------LH---------------------------------------------- |
5 | 1dwuA | 0.22 | 0.09 | 2.91 | 0.92 | CEthreader | | ------------------------------MDRENILKAVKEARSLAKPRNF--------TQSLDLIINLKELDLSRPEEQVVLPNGRGKE-PKIAVIAKG-----------DLAAQAEEMGL----TVIRQDELEELGKNKKMAKKIANEHDFFIAQADMMPLVGKTLGPVLGPRGKMPQPVPA-NANLTPLVERLKKTVLINT-RDKPLFHVLVGNEKMSDEELAENIEAILNTVSRKYEKGLYHVKSAYTKLTMGPPAQIEK--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
6 | 6c0fK | 0.26 | 0.12 | 3.84 | 1.13 | MUSTER | | -----------------------------AIPRERVIKAVNELIKFTSKPKNL---LEDDEEDLQLIVVNNKFTGTSKSFLLNVKHSFYKKDFKVLLILKDSDI--KKVSEDDLFDQLDSEGIK-VDEIICGKDLKTVYKAYEARNAFISQFSLILADDSIVTSLPKLMGGKAYNKETTPISIRTSLTTLTNNIKKVYMNQLPVKLPRGTTLNVHLGNLELRPEEFVDNVELISEQLIKAY-----QIRSIFIKTNRSPVLPLYYNQDVLDELE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
7 | 6c0fK | 0.26 | 0.12 | 3.79 | 3.44 | HHsearch | | -----------------------------AIPRERVIKAVNELIKFTSK--PKNLLEDDEEEDLQLIVVNNKFGTSFKLKLLNVKHSFYKKDFKVLLILKDSDIK--KVSEDDLFDQLDSEGIK-VDEIICGKDLKTVYKAYEARNAFISQFSLILADDSIVTSLPKLMGGKAYNKETTPISIRTHANTLTNNIKKVYMNQLPVKLPRGTTLNVHLGNLELRPEEFVDNVELISEQLIKA----Y-QIRSIFIKTNRSPVLPLYYNQDVLDELE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
8 | 6c0fK | 0.24 | 0.11 | 3.50 | 1.77 | FFAS-3D | | ------------------------------IPRERVIKAVNELIKFTSKPKNEDDEEELKKDLQLIVVNNKSFTGTSKSFLLNVKHSFAVKDFKVLLILKDSDI--KKVSEDDLFDQLDSEGIK-VDEIICGKDLKTVYKAYEARNAFISQFSLILADDSIVTSLPKLMGGKAYNVETTPISIRTHATTLTNNIKKVYMNQLPVKLPRGTTLNVHLGNLELRPEEFVDNVELISEQLIKA-----YQIRSIFIKTNRSPVLPLYYNQ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
9 | 6c0fK | 0.20 | 0.10 | 3.07 | 1.18 | EigenThreader | | -----------------------------AIPRERVIKAVNELIKFTSKPNLLEDDEEELKKDLQLIVVNNKSFTSFKLKLLNVKHSFAVKDFKVLLILKDIKKVSEDDLFDQLDSEG----IKVDEIICGKDLKTVYK-AYEARNAFISQFSLILADDSIVTSLPKLMGGKAYNKTTPISIRTHANKTLTNNIKKVYMNQLPVKLPRGTTLNVHLGNLEWLREEFVDNVELISEQLIKAY-----QIRSIFIKTNRSPVLPLYYNQDVLDELE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
10 | 6c0fK | 0.26 | 0.12 | 3.66 | 1.69 | CNFpred | | ------------------------------IPRERVIKAVNELIKFTSKP--KNLLEDDEKKDLQLIVVNNKSF-SFKLKLLNVKHSFYKPWFKVLLILKDSD--IKKVSEDDLFDQLDSEGI-KVDEIICGKDLKTVYKAYEARNAFISQFSLILADDSIVTSLPKLMGGKAYNKVTTPISIRTSLTTLTNNIKKVYMNQLPVKLPRGTTLNVHLGNLELRPEEFVDNVELISEQLIKA-----YQIRSIFIKTNRSPVLPLYYNQ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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