Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Download alignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420
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| SS Seq | CCCCCCCHHHHHCCCCCCCCCCCCCCCSSSSSSCCCSSSSSCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCSSSSSSCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSCC MAPFGRNLLKTRHKNRSPTKDMDSEEKEIVVWVCQEEKLVCGLTKRTTSADVIQALLEEHEATFGEKRFLLGKPSDYCIIEKWRGSERVLPPLTRILKLWKAWGDEQPNMQFVLVKADAFLPVPLWRTAEAKLVQNTEKLWELSPANYMKTLPPDKQKRIVRKTFRKLAKIKQDTVSHDRDNMETLVHLIISQDHTIHQQVKRMKELDLEIEKCEAKFHLDRVENDGENYVQDAYLMPSFSEVEQNLDLQYEENQTLEDLSESDGIEQLEERLKYYRILIDKLSAEIEKEVKSVCIDINEDAEGEAASELESSNLESVKCDLEKSMKAGLKIHSHLSGIQKEIKYSDSLLQMKAKEYELLAKEFNSLHISNKDGCQLKENRAKESEVPSSNGEIPPFTQRVFSNYTNDTDSDTGISSNHSQDSETTVGDVVLLST |
1 | 2cs4A | 0.32 | 0.07 | 2.08 | 1.26 | FFAS-3D | | --------------------SSGSSGMELKVWVDGVQRIVCGVTEVTTCQEVVIALAQAI-----------GRTGRYTLIEKWRDTERHLAPHENPIISLNKWGQYASDVQLILRRTGPSGPSS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
2 | 2cs4A | 0.32 | 0.07 | 2.08 | 4.35 | HHsearch | | -------------------GSSGSSGMELKVWVDGVQRIVCGVTEVTTCQEVVIALAQ-----------AIGRTGRYTLIEKWRDTERHLAPHENPIISLNKWGQYASDVQLILRRTGPSGPSSG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
3 | 3tcaA | 0.12 | 0.07 | 2.36 | 0.48 | CEthreader | | -----------------------VKKLVVKVHMDDSSTKSLMVDERQLARDVLDNLFEKTH---------CDCNVDWCLYEIYPQIERVFEDHENVVEVLSDWTRDTENKVLFLEKEERYAVFKNPQNFYLMNAKNKEYLLEESFCGTSIIVPEL-------------------------------------------------------------EGALYLKEDGKKSWKRRYFLLRASGIYYVPKGKTKTSRDLACFIQFENVNIYYGIQCKMKYKAPTDHCFVLKHPQIQKESQYIKYLCCDDARTLSQWVMGIRIAKYGKTLYDNYQRAVARA-------------------------------------------------------------------------------------------------- |
4 | 7ko4P | 0.08 | 0.05 | 2.06 | 0.98 | EigenThreader | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------LKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEELKTVTNNLKSLEAQAEKYSQKEDRYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSI- |
5 | 2tmaA | 0.10 | 0.05 | 1.85 | 1.21 | FFAS-3D | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALND-------------------------------------------- |
6 | 6yvuA | 0.11 | 0.11 | 3.78 | 0.95 | SPARKS-K | | VVVQDSQTATQLLERGRLRDKIYTRPISAP----GKVELA----------------INLIRFDESITKAMEFIFGNSLICED--------------PETAKKITFHPKIARSITDVYDPEGTLSESLLVDIQKYNQIQKQIETIQADLNHVTEELQTQYATSQKTKTIQSDLNLSLHKLDLAKRNLDANSSQIIARNEEILRDIGECENEIKTKQMSLKKCQEEVSTIEKDMKEYDSSKLNELKKELKLLELEEQESESERKYDLFQNLELETEQLSSELDSNKTLLHNHLKSIESLKLENSDLEGKIRGVEDDLVTVQTELNEEKKRLMDIDDELNELETLIKKKQDEKKSSELELQKLVHDLNKYKSNTNNMEKIIEDLDTYELRKKVNPNIMNMIENVEKKEAALKTMIKTIEKDKMKIQETISKLNEYKRE |
7 | 5xg2A | 0.16 | 0.07 | 2.36 | 0.81 | CNFpred | | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------TKGAIVRWGKRKEKLIEEIRAREEERNALVVRLGEIDRTFAVAREEFDTVVKELEEARKSLYEGEA-------RIKRAEEEKERLKAEILTGERLPGLRERAENLRRLVEEKRAEISELERRLSSIT-QSFELRIKLSDLEKELELARKDLEKVLAEERAVREEIEVAKRRINELDTLIERERGELAKLRGRIERLER------------------------------------------------------------------ |
8 | 2pffB | 0.07 | 0.04 | 1.52 | 0.50 | DEthreader | | -------PSKVGQFDQVLNLCLTEFENCYLEGN--DIHALAAK---LL-QEN-TTL-KTKELIK------------------------------------------------NSALFAAQLVAIFRAIAEDIQIPFKATTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGQDVWNRADNHFKDYGFIHFGGEKG------------------------EIN-STSYTFRSEKGLLSTFTQPALTLMEKAA--D--L-------------------GLIPADATFLSLADVMSGGGGGGGG------------------------------------------------------------------------------------------------ |
9 | 5ejqA | 0.09 | 0.06 | 2.38 | 0.95 | MapAlign | | QRFTLNGARKQVPSVTELESIKENRPIFVRITATGSLKGLH-IDSATTCQESSNDLSQRS------RMRVNSKENGFTIIESFNGIERDIAPTDKLCDVLSKVENLQVNFKFVFKKKLFFDN------------------------------------------------------ITNVPTTSINVENEFYYHQLFNDLFNYCKDQDYQISIGSLKLQFESSDYTDEIRAWLPGNGRGKYFTTDIEKNRFDDFINKYKPEDAKKQMVQLLEKHPLANCSLVVCEHQSESLPYPKNFVLALNVNGINIYDPATSKMLESVKYSNQSSVSIILENKSTLQAFTGDVQKLVSLIKEYSLYLRNNALEH--------------------------------------------------------------------- |
10 | 1sjjA | 0.09 | 0.09 | 3.28 | 0.82 | MUSTER | | AETAANRICKVLAVNQENEQLMEDY-SDLLEWIRRTIPWLENRAPENTMQAMQQKLEDFRDYRRLHKPPKVQEKCQ-TLQTKLRLSNRPMPSEGKINNAWGGLEQAEKGYEEWLLNEIRRLERLDHLAEKRQKASIHESWTDGKEAMLQQKDYETATLSEIKALLKKHEAFESAAHQDRVEQIAAIAQELNELDYDSPSVNARCQKICDQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDIEEIQGLTTAHEQFKATLPDADKERQAILGIHNEVSKIVQTYHVNMPYTTITPQEINGKWEHVRQLVPRRDQALMEEHARQQQNERLRKQFGAQANVIGPWIQTKMEEIGRISIEMHGTLEDVNYKPKIDQLEGDHQQIQEALIFDNK-----HTNYTMEHIRVGWEQLLTTI |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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