>O75896 (110 residues) MGASGSKARGLWPFASAAGGGGSEAAGAEQALVRPRGRAVPPFVFTRRGSMFYDEDGDLA HEFYEETIVTKNGQKRAKLRRVHKNLIPQGIVKLDHPRIHVDFPVILYEV |
Sequence |
20 40 60 80 100 | | | | | MGASGSKARGLWPFASAAGGGGSEAAGAEQALVRPRGRAVPPFVFTRRGSMFYDEDGDLAHEFYEETIVTKNGQKRAKLRRVHKNLIPQGIVKLDHPRIHVDFPVILYEV |
Prediction | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCSSSCCCCCHHHHHSSSSSSCCCCCHHHHHHHHHHCCCCCCSSCCCCCCCCCCCCSSSSSC |
Confidence | 99775666666886678888887666443322134555689852315764246277533444211244047872234567776368866425168983256775787609 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 | | | | | MGASGSKARGLWPFASAAGGGGSEAAGAEQALVRPRGRAVPPFVFTRRGSMFYDEDGDLAHEFYEETIVTKNGQKRAKLRRVHKNLIPQGIVKLDHPRIHVDFPVILYEV |
Prediction | 76464454443323444445556544555532442553434433345513212364352034125413346737544414413650445241516424141401000155 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 | | | | | | |||||||||||||
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SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCSSSCCCCCHHHHHSSSSSSCCCCCHHHHHHHHHHCCCCCCSSCCCCCCCCCCCCSSSSSC MGASGSKARGLWPFASAAGGGGSEAAGAEQALVRPRGRAVPPFVFTRRGSMFYDEDGDLAHEFYEETIVTKNGQKRAKLRRVHKNLIPQGIVKLDHPRIHVDFPVILYEV | |||||||||||||||||||
1 | 3s7eA | 0.04 | 0.04 | 1.98 | 0.59 | CEthreader | AGDITNPINLREGEPDLSNNFGKLFEVKPDKKNPQLQDLDMMLTCVEIKEGALMLPHFTGNLELVAVRKEQGSNREVRRYTARLKINASSELHLLGFGINAENNHRIFLA | |||||||||||||
2 | 6g43A | 0.08 | 0.07 | 2.93 | 0.67 | EigenThreader | VANPTQNLVQNWVAPLEIGDIPKSCLNT---KDPYGIPGEANNVPSFAVVSQETPTKDQLAGIIGLEIKVDSDVGIFQATFVTPEYKLEVFSIRDNLTYSDGTFDDLT-L | |||||||||||||
3 | 2zagD1 | 0.12 | 0.10 | 3.54 | 0.29 | FFAS-3D | -------------FNAISYLGGAITRREYNGDESGRGAVTTLLPLPRYGEKYVNLYAKVIVDVSSVKVTVGDRECDPLVTFTPSGKTIKGTGTCSD---GNAFPYVLH-- | |||||||||||||
4 | 5od4A | 0.12 | 0.12 | 4.14 | 0.69 | SPARKS-K | RRTSSTSFTTSFSTRMLHRDPPYERAGNSGLNHRIRSLRTVIDVAPPDGHQAIAN-----YEIEVRRIPVATPNDCFHTARLSTGSRGPATISWDADA-SYTYYLTISED | |||||||||||||
5 | 3uezA | 0.10 | 0.05 | 1.69 | 0.58 | CNFpred | -----------------------------------------------------------DGNYLCRMKLGETEVTKQEHLSVVKPLTLSVHSERSFSVLTVTCTVNAFPH | |||||||||||||
6 | 7ntxA2 | 0.06 | 0.05 | 2.05 | 0.83 | DEthreader | SDIDDPLPILKGYQA-RLKP-N-YQV-DRESM--SE--TIYGIHFCPEQKYYIKDI---QLGYEVTANF----DLN-VKVESWKEDEYSIIKIYMPLVVSIGFGLL---- | |||||||||||||
7 | 6enyG | 0.07 | 0.06 | 2.63 | 0.82 | MapAlign | ----SKHKSDFGKFVLSSGKFYGDEEKDKGLQTSQDAR----FYALSASVKLFPNSLEYNIMPDNTYEVKIDNSQVSGSLYAYDNFGVLGLDLWQVKSGTIFDNFLIT-- | |||||||||||||
8 | 1vw1A | 0.09 | 0.09 | 3.45 | 0.52 | MUSTER | KAASSDLKIYISPKLRIIHNGYEGQKRNQCNLMNKYGKLGDKFIVYTSLGVNPNNSSNKLMFYPVYQYSGNTSGLNQGRLLFHRDTTYPSKVEAWIPGAKRSLTNQNAAI | |||||||||||||
9 | 6uxdA | 0.08 | 0.05 | 2.13 | 0.41 | HHsearch | TSLNGETLPSAWISVWPKDSSP----LS-----------------EKNILIYFSNNERLAFPLWTSIDTP-TG--TVIIKTIEMQAASS--YPA-LPNF----------- | |||||||||||||
10 | 5e1rA | 0.07 | 0.07 | 2.95 | 0.51 | CEthreader | KSQRSSYSNQFGQFFEACPEEHRQLQEMDVLVNYAE--IKRGAMMVPHYNSKATVVVYVVEGTGRFEMACPHDQFQKVTARLARGVIPAGHPIAITASQNENLRLVGFGI | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |