>O75879 (219 residues) MAAPMLRWGCRGRRWAFARVDGGSCHRRGAPTGSTSNQIRGESSVAQQPLHTAQKTRKGE HKWAAVVGLEIHAQISGSLIYGVCAGKKQSQVIPKTVRIKQIQLELLEVVLEPDMSCGEE AATAVRELQLILQALGTSQANMAEGQLRVDANISVHHPGEPLGVRTEVKNLNSIRFLAKA IDYEIQRQINELENGGEILNETRSFHHKLGCTMSMRDKE |
Sequence |
20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | MAAPMLRWGCRGRRWAFARVDGGSCHRRGAPTGSTSNQIRGESSVAQQPLHTAQKTRKGEHKWAAVVGLEIHAQISGSLIYGVCAGKKQSQVIPKTVRIKQIQLELLEVVLEPDMSCGEEAATAVRELQLILQALGTSQANMAEGQLRVDANISVHHPGEPLGVRTEVKNLNSIRFLAKAIDYEIQRQINELENGGEILNETRSFHHKLGCTMSMRDKE |
Prediction | CCCHHHHHCCSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCCCCCSSSSSSSSSSSSSCCCCCSSCCCCCCCCCCCCCCCSSSSCCCCCCSSSSSSCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCSSSCCSSSSCCCCCCCCCSSSSCCCCCHHHHHHHHHHHHHHHHHHHHHCCCSSSSSCCSCCCCCSSSSCCCCC |
Confidence | 961013418862565677433345789999877251236687765556357402156772667999999975304896120356776446788626730457974699960788899999999999999999984775676235825530247654789877732564267689999999999999999999919938855055738999582155789 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | MAAPMLRWGCRGRRWAFARVDGGSCHRRGAPTGSTSNQIRGESSVAQQPLHTAQKTRKGEHKWAAVVGLEIHAQISGSLIYGVCAGKKQSQVIPKTVRIKQIQLELLEVVLEPDMSCGEEAATAVRELQLILQALGTSQANMAEGQLRVDANISVHHPGEPLGVRTEVKNLNSIRFLAKAIDYEIQRQINELENGGEILNETRSFHHKLGCTMSMRDKE |
Prediction | 750300013041364323302431404133442330002235442153010324434646644141310202442433322444444434554332131430100001000202241061023005302300310220434355222314131103447762423241441410420340041015201510676650331024125756403522658 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
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SS Seq | CCCHHHHHCCSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCCCCCSSSSSSSSSSSSSCCCCCSSCCCCCCCCCCCCCCCSSSSCCCCCCSSSSSSCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCSSSCCSSSSCCCCCCCCCSSSSCCCCCHHHHHHHHHHHHHHHHHHHHHCCCSSSSSCCSCCCCCSSSSCCCCC MAAPMLRWGCRGRRWAFARVDGGSCHRRGAPTGSTSNQIRGESSVAQQPLHTAQKTRKGEHKWAAVVGLEIHAQISGSLIYGVCAGKKQSQVIPKTVRIKQIQLELLEVVLEPDMSCGEEAATAVRELQLILQALGTSQANMAEGQLRVDANISVHHPGEPLGVRTEVKNLNSIRFLAKAIDYEIQRQINELENGGEILNETRSFHHKLGCTMSMRDKE | |||||||||||||||||||
1 | 4wj3B | 0.38 | 0.27 | 7.98 | 1.00 | DEthreader | ------L-TQ-------------------------------------------------LNEEAVRMACPIVGKG--HLDITLE------DGTTKRIGITRAHLPLLEIVSEPDIRSAKEAVAYVKAIHALVRYLGICDGNMAEGSLRCDCNVSVRPKQAEFGTRAEIKNVNSFRFIEKAINHEIQRQIELIEDGGKVVQETRLYDPNKDETRSMRGKE | |||||||||||||
2 | 3ip4B1 | 0.31 | 0.29 | 8.69 | 3.13 | SPARKS-K | ------------MHFETVELKTDSKMFSPSPAHFGAEPNSNTNVIDLAYPGVLPVVNKRAVDWAMRAAMALNMEIATESKIDIEVDGE-----TKRIGITRLHMELIEIVSEPDIRSPKEAYAYLEKLRSIIQYTGVSDVKMEEGSLRCDANISLRPYGEKFGTKAELKNLNSFNYVRKGLEYEEKRQEEELLNGGEIGQETRRFDESTGKTILMRVKE | |||||||||||||
3 | 3ip4B | 0.23 | 0.23 | 7.14 | 1.26 | MapAlign | --FETVIGLEVHVELKTDSKMFSPSPAHFGAEPNSNTNVIDLAYPGVLPVVNKRAVDWAMRAAMAYQISQFDQPIGENGYIDIEV---DGETKRIGITRLHMEEGTPLIEIVSEIRSPKEAYAYLEKLRSIIQYTGVSDVKMEEGSLRCDANISLRPGQEKFGTKAELKNLNSFNYVRKGLEYEEKRQEEELLNGGEIGQETRRFDESTGKTILMRVKE | |||||||||||||
4 | 3h0rE | 0.33 | 0.31 | 9.33 | 1.18 | CEthreader | -----EKYEAVIGLEIHVQMDTKTKMFCGCKVEFGAEPNTNVCPVCLGMPGALPIVNKRAVEYAIRASLALNCEVNGWVELNLPNG------EKKKVRIRRLHIELMEIVTEPDIRTPEEARLFLEKLRNIMRYAGVSKADMEKGQLRCDINVSIRPKGSEFGTRVEIKNVNSFRFVQKALEYEIERQINVVEEGGEVVQETRTFDPQTGKTYPMRTKE | |||||||||||||
5 | 3ip4B1 | 0.32 | 0.29 | 8.81 | 1.80 | MUSTER | WAMRAMALNMEIAT--ESKFDRKNYFYPDNPKAYQISQFDQP--IGENGYIDIEV--DGETKRIGITRLHM-EEDAGKSTHK----------EYSLVDLNRQGTPLIEIVSEPDIRSPKEAYAYLEKLRSIIQYTGVSDVKMEEGSLRCDANISLRPYGEKFGTKAELKNLNSFNYVRKGLEYEEKRQEEELLNGGEIGQETRRFDESTGKTILMRVKE | |||||||||||||
6 | 3h0rE | 0.46 | 0.32 | 9.45 | 3.76 | HHsearch | ------------------------------------------------------------EKYEAVIGLEIHVQMDGWVELNLPNG------EKKKVRIRRLHIELMEIVTEPDIRTPEEARLFLEKLRNIMRYAGVSKADMEKGQLRCDINVSIRPKGKEFGTRVEIKNVNSFRFVQKALEYEIERQINVVEEGGEVVQETRTFDPQTGKTYPMRTKE | |||||||||||||
7 | 3ip4B1 | 0.32 | 0.29 | 8.82 | 2.39 | FFAS-3D | --AMRAAMALNMEIATESKFDRKNYFYPDNPKAYQISQFDQPIGENGYI----DIEVDGETKRIGITRLHME-EDAGKSTHK---------GEYSLVDLNRQGTPLIEIVSEPDIRSPKEAYAYLEKLRSIIQYTGVSDVKMEEGSLRCDANISLRPYGEKFGTKAELKNLNSFNYVRKGLEYEEKRQEEELLNGGEIGQETRRFDESTGKTILMRVKE | |||||||||||||
8 | 3kfuF1 | 0.29 | 0.26 | 8.05 | 1.02 | EigenThreader | -----------MYEAVIGHLKTRRADYFGAEPNTHTCPVCLGLPGALPVPNRVAVEHGLRLALALGNYQISQYLGRGGSLPLG----------ERRVRIKRLHLEEDELVTEPDLKTPEEARLFLQRIQALVQTLGISDASPEEGKLRADVNVSVRRVGEPLGTKVEIKNLNSFKSVQRALEYEIRRQTEILRRGEKVKQATMGFEEGSGKTYPMADYR | |||||||||||||
9 | 2df4B | 0.39 | 0.26 | 7.70 | 2.09 | CNFpred | ----------------------------------------------------------------QISQFDQPIGENGYIDIEVD-------GETKRIGITRLHMPLIEIVSEPDIRSPKEAYAYLEKLRSIIQYTGVSDVKMEEGSLRCDANISLRPYGQKFGTKAELKNLNSFNYVRKGLEYEEKRQEEELLNGGEIGQETRRFDESTGKTILMRVKE | |||||||||||||
10 | 3ip4B1 | 0.39 | 0.27 | 8.10 | 1.00 | DEthreader | ------L-TD-------------------------------------------------VNKRAVDWAMPIGENG---YIDIEVD-----G-ETKRIGITRLHMELIEIVSEPDIRSPKEAYAYLEKLRSIIQYTGVSDVKMEEGSLRCDANISLRPYQEKFGTKAELKNLNSFNYVRKGLEYEEKRQEEELLNGGEIGQETRRFDESTGKTILMRVKE | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |