>O75874 (165 residues) GTVFREAIICKNIPRLVSGWVKPIIIGRHAYGDQYRAMYNQDKSIEDFAHSSFQMALSKG WPLYLSTKNTILKKYDGRFKDIFQEIYDKQYKSQFEAQKIWYEHRLIDDMVAQAMKSEGG FIWACKNYDGDVQSDSVAQGYGSLGMMTSVLVCPDGKTVEAEAAH |
Sequence |
20 40 60 80 100 120 140 160 | | | | | | | | GTVFREAIICKNIPRLVSGWVKPIIIGRHAYGDQYRAMYNQDKSIEDFAHSSFQMALSKGWPLYLSTKNTILKKYDGRFKDIFQEIYDKQYKSQFEAQKIWYEHRLIDDMVAQAMKSEGGFIWACKNYDGDVQSDSVAQGYGSLGMMTSVLVCPDGKTVEAEAAH |
Prediction | CCSSCCCSCCCCCCCCCCCCCCCSSSSSCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCSSSSSCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCSSSSSSHHHHHHHHHHCCCCSSSSSCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCSSSSSCCC |
Confidence | 934066411379875558621676762056443333355528999999999999999619937998341568998769999999999862313333318158764379999999738996699976877437888888751760112434238999758964289 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 | | | | | | | | GTVFREAIICKNIPRLVSGWVKPIIIGRHAYGDQYRAMYNQDKSIEDFAHSSFQMALSKGWPLYLSTKNTILKKYDGRFKDIFQEIYDKQYKSQFEAQKIWYEHRLIDDMVAQAMKSEGGFIWACKNYDGDVQSDSVAQGYGSLGMMTSVLVCPDGKTVEAEAAH |
Prediction | 842234404154044113314430202354354425444423620340021004204746230000123202440342024004400754256406736031322202300120044453000003123020101210333213132211211573421112248 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 | | | | | | | | | |||||||||||||
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SS Seq | CCSSCCCSCCCCCCCCCCCCCCCSSSSSCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCSSSSSCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCSSSSSSHHHHHHHHHHCCCCSSSSSCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCSSSSSCCC GTVFREAIICKNIPRLVSGWVKPIIIGRHAYGDQYRAMYNQDKSIEDFAHSSFQMALSKGWPLYLSTKNTILKKYDGRFKDIFQEIYDKQYKSQFEAQKIWYEHRLIDDMVAQAMKSEGGFIWACKNYDGDVQSDSVAQGYGSLGMMTSVLVCPDGKTVEAEAAH | |||||||||||||||||||
1 | 1lwdA | 0.68 | 0.68 | 19.33 | 1.50 | DEthreader | LGGTVFREPIICKIPRVPGWTKPITIGRHAHGQYKAGMYNTDESISGFAHSCFQYAIQKKWPLYMSTKNTILKAYDGRFKDIFQEIFEKHYKTDFDKYKIWYEHRLIDDMVAQVLKSSGGFVWACKNYDGDVQSDILAQGFGSLGLMTSVLVCPDGKTIEAEAAH | |||||||||||||
2 | 3us8A3 | 0.68 | 0.61 | 17.25 | 2.26 | SPARKS-K | GVIFREPIICKNVPRLVPGWTKPIIVGRHAFGDQYR--YNLDESITEFARASFNYGLQRKVPVYLSTKNTILKAYDGRFKDIFQKVFDEEFAAQFKAEKLWYEHRLIDD-VASALKWSGGYVWACKNYDGDVQSDIVAQGFGSLGLTSVL--------------- | |||||||||||||
3 | 2qfwD | 0.71 | 0.71 | 20.14 | 0.79 | MapAlign | LGGTV-FREPPRIPRLVPRWEKPIIIGRHAHGDQYKAMYNTDESIEGFAHSSFKLAIDKKLNLFLSTKNTILKKYDGRFKDIFQEVYEAQYKSKFEQLGIHYEHRLIDDMVAQMIKSKGGFIMALKNYDGDVQSDIVAQGFGSLGLMTSILVTPDGKTFESEAAH | |||||||||||||
4 | 2qfwD | 0.75 | 0.75 | 21.29 | 0.59 | CEthreader | GTVFREPIVIPRIPRLVPRWEKPIIIGRHAHGDQYKAMYNTDESIEGFAHSSFKLAIDKKLNLFLSTKNTILKKYDGRFKDIFQEVYEAQYKSKFEQLGIHYEHRLIDDMVAQMIKSKGGFIMALKNYDGDVQSDIVAQGFGSLGLMTSILVTPDGKTFESEAAH | |||||||||||||
5 | 6aj6A2 | 0.72 | 0.72 | 20.47 | 2.46 | MUSTER | GTVFREPIICSNVPRLVTTWKKPVVIGRHAFGDQYSGMYNTDDSIRDFARSCFEFALARKWPLYLSTKNTILKHYDGRFKDIFAEMYKALYETKFKTCGIFYEHRLIDDMVAHCMRSEGGYVWACKNYDGDVQSDSLAQGFGSLGMMTSILMTPDGKTVEVEAAH | |||||||||||||
6 | 6aj6A2 | 0.65 | 0.65 | 18.67 | 1.67 | HHsearch | GTVFREPIICSNVPRLVTTWKTDAVVKEPGTFEMRFIMYNTDDSIRDFARSCFEFALARKWPLYLSTKNTILKHYDGRFKDIFAEMYKALYETKFKTCGIFYEHRLIDDMVAHCMRSEGGYVWACKNYDGDVQSDSLAQGFGSLGMMTSILMTPDGKTVEVEAAH | |||||||||||||
7 | 6aj6A2 | 0.72 | 0.72 | 20.31 | 2.67 | FFAS-3D | GTVFREPIICSNVPRLVTTWKKPVVIGRHAFGDQYSATDNTDDSIRDFARSCFEFALARKWPLYLSTKNTILKHYDGRFKDIFAEMYKALYETKFKTCGIFYEHRLIDDMVAHCMRSEGGYVWACKNYDGDVQSDSLAQGFGSLGMMTSILMTPDGKTVEVEAAH | |||||||||||||
8 | 6aj6A2 | 0.68 | 0.68 | 19.32 | 1.02 | EigenThreader | -GTVFREPIICNVPRLVTTWKKPVVIGRHAFGDQYSAMYNTDDSIRDFARSCFEFALARKWPLYLSTKNTILKHYDGRFKDIFAEMYKALYETKFKTCGIFYEHRLIDDMVAHCMRSEGGYVWACKNYDGDVQSDSLAQGFGSLGMMTSILMTPDGKTVEVEAAH | |||||||||||||
9 | 4l06A | 0.99 | 0.99 | 27.84 | 2.00 | CNFpred | GTVFREAIICKNIPRLVSGWVKPIIIGRHAYGDQDRAMYNQDKSIEDFAHSSFQMALSKGWPLYLSTKNTILKKYDGRFKDIFQEIYDKQYKSQFEAQKIWYEHRLIDDMVAQAMKSEGGFIWACKNYDGDVQSDSVAQGYGSLGMMTSVLVCPDGKTVEAEAAH | |||||||||||||
10 | 2qfwD | 0.64 | 0.64 | 18.18 | 1.50 | DEthreader | LGGTVFREPIVIPIPRVPRWEKPIIIGRHAHGDQYKAMYNTDESIEGFAHSSFKLAIDKKLNLFLSTKNTILKKYDGRFKDIFQEVYEAQYKSKFEQLGIHYEHRLIDDMVAQMIKSKGGFIMALKNYDGDVQSDIVAQGFGSLGLMTSILVTPGKTFESEAAHG | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |