Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400
| | | | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCSHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC MEPGRRGAAALLALLCVACALRAGRAQYERYSFRSFPRDELMPLESAYRHALDKYSGEHWAESVGYLEISLRLHRLLRDSEAFCHRNCSAAPQPEPAAGLASYPELRLFGGLLRRAHCLKRCKQGLPAFRQSQPSREVLADFQRREPYKFLQFAYFKANNLPKAIAAAHTFLLKHPDDEMMKRNMAYYKSLPGAEDYIKDLETKSYESLFIRAVRAYNGENWRTSITDMELALPDFFKAFYECLAACEGSREIKDFKDFYLSIADHYVEVLECKIQCEENLTPVIGGYPVEKFVATMYHYLQFAYYKLNDLKNAAPCAVSYLLFDQNDKVMQQNLVYYQYHRDTWGLSDEHFQPRPEAVQFFNVTTLQKELYDFAKENIMDDDEGEVVEYVDDLLELEETS |
1 | 5udiA | 0.09 | 0.08 | 3.20 | 1.27 | FFAS-3D | | VKDSLEQCHFTWEMPDLENRVLDQIEFLD----------TKYSVGIHNLLAYVKHLKGQNEEALKSLKEAENLMQELAEAQTYLDKVENIKKLSNPFRYRMECPEIDCEEGWALLKCGGKNYER----------AKACFEKVLEVDPSAGYAISAYRLNHKPFSLLPLRQAVRLNPDNGYIKVLLLKLQDEGQEAEEALANMSSQTYVFRYAAKFYRRKGSVDKALELLKKALQEIGLCYKAQMIQIKEATKGQPRGQNREKLDKMIRSAIFHFESAVEKKPTF----------EVAHLDLARMYIEAGNHRKAEENFQKLLCMKPVVEETMQDIFHYGRFQEFQKKSDVNIEQANSLKKLVLRKLRRESLSLLGFVYKLEGNMNEAEEYYERAERL---- |
2 | 6c9mA | 0.12 | 0.10 | 3.70 | 1.21 | CNFpred | | LKWDKDNLQILRDLSLLQIQMRDLEGYRET--RYQLLQLRPAQRASWIGYAIAYHLLEDYEMAAKILEEFRKTQQTSP-----------------------DKVDYEYSELLLYQNQVLREAG----------LYREALEHLCTYEVEETKGELLLQLCRLEDAADVYRGLQERNPENWAYYKGLEKALKPANMLERLKIYE-PRGLVPRRLPLNFLSGEKFKECLDKFLRMN--FSKGCPPVFNTLRSLYKDKEKVAIIEELVVGYETSLKSCRLFNPNDD---GKEEPPTTLLWVQYYLAQHYDKIGQPSIALEYINTAIESTPTLIELFLVKAKIYKHA----------GNIKEAARWMDEAQDRFINSKCAKYMLKANLIKEAEEMCSKFTREGTSA |
3 | 1w3bA | 0.13 | 0.11 | 3.97 | 1.01 | MUSTER | | QEPDNTGVLLLLSSIHFQCRRLDRSAHF----STLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKA---GRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQ-----------------PHFPDAYCNLANALKEK-----SVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHY---KEAIRISPTFADAYSNMGNTLKEMQD-------------------- |
4 | 4ui9X | 0.08 | 0.08 | 3.07 | 0.39 | CEthreader | | QQKKALLPSEIEVKYKLAECYTVLKQDKDAIAILDGIPSRQRTPKINMMLANLYKKAGQERPSVTSYKEVLRQCPLALDAILGLLSLSKGAEVASMTMNVIQTVPNLDWLSVWIKAYAFVHTGDNSRAISTICSLEKKSLLRDNVDLLGSLADLYFRAGDNKNSVLKFEQAQMLDPYLIKGMDVYGYLLAREGRLEDVENLSDQHAEPWVVSGCHSFYSKRYSRALYLGAKAIQLNSVQALLLKGAALRNMGIRLAPCRLDCYEGLIECYLASNSIREAMVMANNVYKTLGANAQTLTLLATVCLEDPVTQEKAKTLLNKALTQEPDYIKAVVKKAELLSREQKYEDGIALLRNALANQSDCVLHRILGDFLVAVNEYQEAMDQYSIALSLDP-------- |
5 | 4gpkA | 0.08 | 0.05 | 2.19 | 0.73 | EigenThreader | | RDVEEDVKGKLDEWLNALVHERIYEELQGEMKHVLD---FEIINYYKLLYTRYLIMKRDISALEEELDKLKK----------------------------------------------------------VYKKYS----PFQKLLYMYGRGLLCCLQYRWKDGLDYLLKTEVMAHETGLYYNIALAYTHLHHLAIHFVNKFRNIINCQILIAVSYTEKGQYEEALKMYESILREATSF------------------------------------------------ADKDVLLAITLSNMGSIYYKKGKYQQAKKYYLDSLQLQKQDLNYLDTIYEMALVCIKLEELEEARTLIDKGIDAAKFLENEAIVELAEHFSSLSRFEESNRYYRLVIDLMN--- |
6 | 4ui9X | 0.10 | 0.09 | 3.49 | 1.27 | FFAS-3D | | IDHVRDMAAAGLHSNVRLLSLLLTLSNNNPE-----LFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKTVLKQDKDAIAILDGIPSRQRTPKIQERPSVTSYKEVLRVASMTMNVIQTVPNLDWTGDNSRAISTICSLDLLGSLADLYFRAGDNKNSVLKFEQAQMLDPYLIKGMDVYYLLAREGRLEDRLFNISDQHAEPWVVSGCHSFYSKRYSRALYLGAKAIQLLRNMVQEAIIHFREAIRLAPCRDCYEGLIECYLEAMVMANNVYKTLGANA---------QTLTLLATVCLEDPVTQEKAKTLLNKALTQEPDYIKAVVKKAELLSREQKY----------EDGIALLRNALANVLHRILGDFLVAVNEYQEAMDQYSIALSLD--- |
7 | 4ui9C | 0.11 | 0.10 | 3.61 | 0.95 | SPARKS-K | | FLHGCNSKKAYFLYMYSRYLSGEKKKDDEPLEKGQVKNEALLDGFGLYLYGVVLRKLDLVKEAIDVFVEATHVLPLHWGAWLELCNLITDKEMLKFLSLPDTW------MKEFFLAHIYTELQL----------IEEALQKYQNLIIVSQIAVAYHNIRDIDKALSIFNELRKQDPYRIENMDTFSNLLYVRSMKHNLCEIDKYRVETCCVIGNYYSLRSQHEKAALYFQRALKLAWTLMGHEYMEMKNTSANKRDYRAWYGLGQTYEICLYYYRRAHQLRPN----------DSRMLVALGECYEKLNQLVEAKKCYWRAYAVGDVEK---MALVKLAKLHEQLTESE---QAAQCYIKYIQDIYSSTAFRYLAQYYFKCKLWDEASTCAQKCCAFNDTR |
8 | 4hnwA | 0.10 | 0.08 | 2.98 | 1.17 | CNFpred | | ----------YRDLATLQSQIG--------------------DFKNALVSRKKYWEAFGYRANWTSLAVAQDVNGERQQAINTLSQFEKLAEGKISDSEKYEHSECLMYKNDIMYKAASDNQDK----------LQNVLKHLNDIELLERKATIYMKLGQLKDASIVYRTLIKRNPDNFKYYKLLEVSLGIQGDNKL--------KKALYGKLEQFYP--TFLQDKEELSKKLREYVLPQLER-----------GVPATFSNVKPLYQRRSPLLEKIVLDYLSGLDPTQDPIPFIWTNYYLSQHFLFLKDFPKAQEYIDAALDHTPTLVEFYILKARILKHLGLM---DTAAGILEEGRQLDQDRFINCKTVKYFLRAN------NIDKAVEVASLFTKND |
9 | 7cm3A | 0.05 | 0.03 | 1.55 | 0.67 | DEthreader | | TFDALKILYISSLHEVR-IKISPALE------------------------------------------------------------DFVYKIFGGKLGSLVFLLSLFVAVILDNLELDELK-LKQ--K--QS--------------------------FRNFCRVVVRA-F---DLLGLVTYLDWV------NLKIMADVIRGGVMDIFIYLVSLIFLCMPAQLLMVLRCLRPLRFVVRELFSGFNFNETALLTVDQRR-ED--S--T--SMYKSFFII-VG--------MFLLLLCYAFAGVVLFG-TVKYINFSSAKAITVLFRI-------M--CM-QFCTPDCGNYGALYFCSFYVIIAIMLNLLVAIIVENFSLFYSTEEQLLSLSLSYRSIRLEY |
10 | 6af0A | 0.08 | 0.08 | 3.07 | 0.71 | MapAlign | | LQGNQREKLGIITCICWLYLWKSRERNALKSFEEAIRVSQGRNMLAVMGKARALFSLGRYPESLAAYQDVVAKPRKIAWERCLKHANILLGYYLDASGHVPTNSPEFIRLYKKAMTEYTQKSFKLDKNLPLTCALAHKAIQAIASDGWYLLARKEHYDGNLERASDYYRRADDARRGYLPAKFGAAQLSVLKNDLGDQAIRKLLPPQLLNNIGCFYSQEGKHRLATEFFQAALDSCARILVGMGNLHLMAAREM-RRETEQDRQKRSAAYNRAVE-FFDKALVEDRKDYALQIDAHVYVNMGHIYAELRQFSKAIESYEIALSKKANDAGIISCLGRTWLNKGRALHFKFNVAFVQIQIALVEEAAEGLEEAIKILDEIAASPSPPYPRHDIEQRANM--- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
|