Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300
| | | | | | | | | | | | | | | |
| SS Seq | CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCSCCCCCHHHHCCCCCCCCCCSSSSCCCCCSSSCCCCCSSSSCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCSCSCCCCCC LNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNPLMTPDILGSSGAAVHTCVKATFHAFNKYKREGFCLQNVDKAPLAKRRKMKKTSTSTETRSSSSESSHSSSSHSHGKTTPTKTLQPSNPADSNNPETLFQFSDSVA |
1 | 3lijA | 0.35 | 0.26 | 7.72 | 1.00 | DEthreader | | YKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE-NQKKMKERLGTAYYIAPEVLRKK-YDEKCDVWSIGVILFILLAGYPPFGG--Q----TDQ-EILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKESLP-----AS-LTSQ-E-----------------------------------E--TKELTDIFRHIDKNGDG---------------D-N-----SET---QKFDQDG |
2 | 5ig1A2 | 0.32 | 0.22 | 6.58 | 1.73 | SPARKS-K | | VSGGELFDEIVTRKFYNEKDASACMHQILSALQHCHSKNIIHRDLKPENLLLASKDPNAPVKITDFGLAV-IMEQGPTYFGFAGTPGYLSPEVIRRVPYDTAVDVWACGVILYILLVGYPPFWEEDH-------QKLYAQIKNCQYDFPSPEWDSVTTAAKELIKAMLEPNPKRRPTVQELLQHPWIARRDVPGSV-------------HRQATLEELKKFNARRKL--------------------------------------------------------------------------- |
3 | 3q5iA | 0.28 | 0.27 | 8.30 | 0.45 | MapAlign | | YEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFS-KDYKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGG-------QNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKSDDIFKKLDKNGDGQLDKKELIEGYNVLRNFKLGELKNVEEEVDNILKEVVCMDKQILFSEERLRRAFNLFDTDKSGKITKEELANLFGLTSISEKTWNDVLGEAD |
4 | 3lijA | 0.28 | 0.27 | 8.21 | 0.26 | CEthreader | | YKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE-NQKKMKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPPFGGQT-------DQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKESLPSLANAI-ENMRKFQNSQKLAQAALLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFPQIESEVDAILGAADFDRNGYIDYSEFVT |
5 | 3i7bA | 0.30 | 0.28 | 8.54 | 1.40 | MUSTER | | YTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK-MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGAN-------EYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSL-------DNAILNIRQFQGTQKLAQAALLYKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMSAVEHVDFDKNGYI-EYSEFVT |
6 | 6ygnA | 0.22 | 0.20 | 6.27 | 0.73 | HHsearch | | ISGLDIFERINTSFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRR-SSTIKIIEFGQARQLKP-GDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAE-------TNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQKIERVST---KVIR--------TLKH-RRYY-HTLIKKDL--NMV-----VSAARISCGGAIRSQVSVAKVKVASIEIGPVSGQIMHAVGEEGGHIENYDQSQVTWYFGNSEK |
7 | 3soaA3 | 0.37 | 0.26 | 7.67 | 2.80 | FFAS-3D | | VTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDED-------QHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISHRSTVASCM---------HRQETVDCLKK-FNARRKLKG--------------------------------------------------------------------------- |
8 | 3hx4A | 0.27 | 0.26 | 8.12 | 0.85 | EigenThreader | | YTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE-ASKKMKDKIGTAYYIAPEVLHGTYDEK-CDVWSTGVILYILLSGCPPFNG-------ANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDSQDETKELTAIFHKMDAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYDRKTLLSRERLERAFRMFDSDNSGGVSDVDSETWKSVLSEVDKN |
9 | 5u6yA | 0.36 | 0.25 | 7.39 | 2.32 | CNFpred | | VTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDED-------QHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISHRSTVASCM-------------HRQETVDCLKKFNARRK--------------------------------------------------------------------------- |
10 | 3hx4A | 0.38 | 0.28 | 8.34 | 1.00 | DEthreader | | YTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE-ASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNG--A----NEY-DILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISV----SKLTSQDE-------------------------------------TKELTAIFHKMDKNGDGQLD--------------KN---------T----RMFSDN |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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