Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360
| | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCSCCCCCSSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSCCCCCSSSSSCCCCCSSCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MADYWKSQPKKFCDYCKCWIADNRPSVEFHERGKNHKENVAKRISEIKQKSLDKAKEEEKASKEFAAMEAAALKAYQEDLKRLGLESEILEPSITPVTSTIPPTSTSNQQKEKKEKKKRKKDPSKGRWVEGITSEGYHYYYDLISGASQWEKPEGFQGDLKKTAVKTVWVEGLSEDGFTYYYNTETGESRWEKPDDFIPHTSDLPSSKVNENSLGTLDESKSSDSHSDSDGEQEAEEGGVSTETEKPKIKFKEKNKNSDGGSDPETQKEKSIQKQNSLGSNEEKSKTLKKSNPYGEWQEIKQEVESHEEVDLELPSTENEYVSTSEADGGGEPKVVFKEKTVTSLGVMADGVAPVFKKRRTENGKSRNLRQRGDDQ |
1 | 5o9zQ | 1.00 | 0.20 | 5.59 | 1.13 | FFAS-3D | | -------QPKKFCDYCKCWIADNRPSVEFHERGKNHKENVAKRISEIKQKSLDKAKEEEKASKEFAAMEAAALKAYQEDLKR------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
2 | 5yfpH | 0.10 | 0.09 | 3.23 | 1.35 | SPARKS-K | | MLANPHFNAKDF------------VHDKLGNASAITIDKFTSNLTDLSIQVQEEVKLNINKSYNEIMTVNNDLNVAMLELKRVRANINDLNEVLDQCT-------KIAEKRLQLQDQIDQERMRRDR-----SSVLILEKFWDTELDQLFKNVEGAQKFINSTMNSANWMELNTTTGKMVQIFILNDIADKSRDKQNFIVSQCYPLKDVTVTQEEFSTKFSNSNSSLYECRDADECSRLLDVIRKAKDDLCDIFH-------VEEENSKRIRESFRYLQSTQQTPGRENNRS-----------------------PNKNKRRSMGGSITPDMSSTAQRLKFLDEGVEEIDIELARLRFESAVETLLDIESQLEDLS |
3 | 2pffB | 0.09 | 0.09 | 3.30 | 1.32 | MapAlign | | ELVGKFLGYVSSLVEPSKFDQVLNLCLTEFVKTKELIKNYITARLVGDLIKFSAETLSLLIPISCPLIGVIQLAHYVVTAKLLGFTPGELGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG- |
4 | 5o9zQ | 1.00 | 0.20 | 5.59 | 3.05 | HHsearch | | -------QPKKFCDYCKCWIADNRPSVEFHERGKNHKENVAKRISEIKQKSLDKAKEEEKASKEFAAMEAAALKAYQEDLKR------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
5 | 5wyjBB | 0.06 | 0.05 | 2.29 | 0.69 | CEthreader | | -------------------------------------------------------AAAFGVIASNANCVWIPASSGNSNGSGPGQLITSALEDVNIWDIKTGDLVSKLSDGLPPGASDARGAKPAECTYLEAHKDTDLLAVGYADGVIKWDLMSKTVLLNFNGHKAAITLLQFDGTGRLISGSKDSNIIVWDHKDSITGFWCSKDGMIKLWDLKTHQCIETHIAHTGECWGLAVKDDLLITTGTDSGIFEKQSKQRGLKIEFITNSSDKTSFFYIQYSSFILHPFQTIRSLYKIKSASWTTVSSSKLELVLTTSSNTIEYYSIPYEKRDPTSPAPLKTHTIELQGQRTDVRSIDISDDNKLLATASNGSLKIWNIK |
6 | 3au2A | 0.06 | 0.06 | 2.61 | 0.68 | EigenThreader | | ARIFEEIGLMSEFLGDNRAYHQAARTLYDLDTPIEEIAEAEKILEFLRTGKVRKHEELSRKVPRGVLEVMEKTARLLYEGLGIDSLEKLKAALDRGDLTRLKGFGGKRLSLARSLLEAIRALPGVERAELCRYKDDLDFLVASREGERAVEGFVRLPQ---------VEVYAKG--KERATVFLKNGLQVDLPPESYGAGLQYLTGSGETEEEVYAALGLPWIPPPLREDQAALEGRLPKLLELPQVKGDLQVHSTYSDGQNTLEELWEAAKTMGYRHPDG---TLDYPDWVLRELDLVLVSVHSRFNLPHPTARLLGRRAPIEADWEAVFQKAKEKGVAVEIDGYYDRMDLPDAHQGTAQRAWIGPERVLNTLDY |
7 | 2jxwA | 1.00 | 0.20 | 5.59 | 0.67 | FFAS-3D | | -------------------------------------------------------------------------------------------------------------------------DPSKGRWVEGITSEGYHYYYDLISGASQWEKPEGFQGDLKKTAVKTVWVEGLSEDGFTYYYNTETGESRWEKPDD------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
8 | 5jcss | 0.14 | 0.13 | 4.38 | 1.19 | SPARKS-K | | KFPILTNLIPKLIDSYKNVKSIYMNTKFISLNKGRDLIKLCERLDILFPDQLIQSSVYDSIFSEAADCLEPIIQAIGESLDIASSRISLFLTQHVPTLENLDDSIKIGRAVLLQKKSMNSTLFAFTNHISVCIQMTEPVLLVGETGTQQLAKMLAKKLTVINVSQQTE-----TGDGYK------PKTVAVPIQENFETLFNATFSLKKNEKFHKMLHRCFNKNQWKNVVKYKMAQSILKITNTENKKKKRRLNTHEKKLLLDKWADFNDSVKKFEAQSSSIENSFVFNFVERAGEWLLLDEVNLATADT-LESDLLTEPDSRSILLSEKGDAEPIF--RIFACMNPTDVG------KRDL----PMGIRSRFTEI |
9 | 2l5fA | 0.32 | 0.08 | 2.33 | 0.50 | CNFpred | | ----------------------------------------------------------------------------------------------------------------GSDVAAGTASGAKSMWTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKTYYYNSQTKESRWAKPKELEDLEGLE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
10 | 7dxjA | 0.06 | 0.03 | 1.51 | 0.50 | DEthreader | | -------------------NGAPRSLRAALRFAALLAAVPKMAGSVSLTLRYVTTGALELCVRLLSASFLTGGKPLDTTEYP-----------EQ--SDILNYIRTACCILLRVVGQLIILIDFRLVS-------------LKLQEFYKCDQGQDVTMNLVIAAHETSTTR------------M-----LGH-R-EKEYLAVQAITSLVLSAMTVLEQQP-RNKPLKA-LD-TRFG--RKLSIIRLLQINPFYLINYPLDVGPEFSALRLLLSEQL-------------PHRAM-GFPC-------K--------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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