Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460
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| SS Seq | CCCCCCCCCCCSSSSSSSSSCCCSSSSSCCCCCCSSSSHHHCCCCCCCCCCCSSSSSSSSCCCCCCCSSSSSSSSCCCCCCCCCCCCCCCSSSSSSSSCCCCCCCCCCCCCCCCCCCCCCSSSSSCCCCSSSSSSSCCCCCCCCCCCCCCSSSSSSSSCCCCCCCSSSSHHHHCCCCCCCCSSSSSSSSSCCCSSSSSCCCCCSSSSSSSCCCCCCCCCCCCCSSSSSSSSCCCCCSSSSSSSSCCCCCCCCCCCCCCCSCCSSSCCCCCCCCCCCCCCSSSSSSCCCCCCCSSSSSSSSCCCCCCCCCCCCCSSSSSSSSCCCCCCSSSSSCCCCCCCSSSSSCCCCCCSSSSCCCCCSSSSSSSSCCCCCCCCCCCSSSSSSSSCCCCCCSSSSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSCCCCCCCCCCCCCCCCCCCCCCCC SNTFQFTNEAREMGVIAAMRDGFGFIKCVDRDVRMFFHFSEILDGNQLHIADEVEFTVVPDMLSAQRNHAIRIKKLPKGTVSFHSHSDHRFLGTVEKEATFSNPKTTSPNKGKEKEAEDGIIAYDDCGVKLTIAFQAKDVEGSTSPQIGDKVEFSISDKQRPGQQVATCVRLLGRNSNSKRLLGYVATLKDNFGFIETANHDKEIFFHYSEFSGDVDSLELGDMVEYSLSKGKGNKVSAEKVNKTHSVNGITEEADPTIYSGKVIRPLRSVDPTQTEYQGMIEIVEEGDMKGEVYPFGIVGMANKGDCLQKGESVKFQLCVLGQNAQTMAYNITPLRRATVECVKDQFGFINYEVGDSKKLFFHVKEVQDGIELQAGDEVEFSVILNQRTGKCSACNVWRVCEGPKAVAAPRPDRLVNRLKNITLDDASAPRLMVLRQPRGPDNSMGFGAERKIRQAGVID |
1 | 6y6eA | 0.24 | 0.12 | 3.73 | 1.80 | FFAS-3D | | -------------------------------------------------------------------------------------VDSTVYKGQVLKSLDRN-------------DPLPGRIRYRALDSEVEVPFGDKDQKGDFTLRHGDWVQFLLATDRRDQLQRATSIALLDKVSGEKREQGTIASLKEGFGFLRCVERQARLFFHFTEVLDTSREIDINDEVEFTVIQ--ESRLQAIRIKHLPPNSVQFETLVASNIEGCVTREAPKSIKSQDRVEG---------------------------------------------------------------------GVITYEHVKKTIMYFLKDC--EKPPRIGERVRFDIYMVKRNKECIAVNVQQVSLH--------------------------------------------------------- |
2 | 6y6eA | 0.25 | 0.13 | 3.90 | 1.44 | SPARKS-K | | ------------------------------------------------------------------------------------AVDSTVYKGQVLKSLDRNDP-------------LPGRIRYRALDSEVEVPFGDKDQKGDFTLRHGDWVQFLLATDRRDQLQRATSIALLDEVSGEKREQGTIASLKEGFGFLRCVERQARLFFHFTEVLDTSREIDINDEVEFTVIQES--RLQAIRIKHLPPNSVQFETLVASNIEGCVTREA-----------------PKSIKSQD---------------------------------------------------RVEGGVITYE-HVKKTIMYFLKDCE--KPPRIGERVRFDIYMVKRNKECIAVNVQQVSLH--------------------------------------------------------- |
3 | 6y6eA | 0.22 | 0.11 | 3.42 | 2.38 | CNFpred | | ------------------------------------------------------------------------------------AVDSTVYKGQVLKSLDR---------------PLPGRIRYRALYSEVEVPFGDKDQKGDFTLRHGDWVQFLLATDRRDQLQRATSIALLDETFGEKREQGTIASLKEGFGFLRCVERQARLFFHFTEVLDTSREIDINDEVEFTVIQE--SRLQAIRIKHLPPNSVQFETLVASNIEGCVTREAPKS---DRVEGGVITYEH----VKKTIMYFLKD---CEKPPRIGERVRFDIYMVKRNKECIAVNVQQVSLH-------------------------------------------------------------------------------------------------------------------------- |
4 | 7dcyA | 0.10 | 0.07 | 2.77 | 1.34 | MapAlign | | -----------LQGILTLGNKNSGFIRSLDDKTVYYVHYSNLT---GALDGDLVEFCKLDKPQFGDKFDAAVITILK--------RARILYAGNFL-VDQN--------------EFALEYKIVADNPRFMIVNPDSIP----NNLASNTKIAFQIDEYDDNNLCKVSVQQVLQHKAYRQDLTLAFVTVDLDDAIYVKPTGFVLYVAIAEQLSNQLCSLNPAQKRYVVVCEISIKTNKLYPATIISKNRFSYNNKIALPYRVHPQSLIETVGELNITKPQFNLDTVTSSQIASWLNKDNPSYEIFVILLLTLGAFYSVTHFPIRRYIDIHLEAGKTFSGFISAITSFGIFMRMDEN-NFDGLIKITTIPTNKVYKIGDRLEAKLSEIDFIQKRAILTLI-------------------------------------------------------------- |
5 | 6y6eA | 0.25 | 0.13 | 3.90 | 2.48 | HHsearch | | ------------------------------------------------------------------------------------AVDSTVYKGQVLKSLDRN-------------DPLPGRIRYRALDYEVEVPFGDKDQKGDFTLRHGDWVQFLLATDRRDQLQRATSIALLDETSGEKREQGTIASLKEGFGFLRCVERQARLFFHFTEVLDTSREIDINDEVEFTVIQE-SRLQ-AIRIKHLPPNSVQFETLVASNIEGCVTREAPK--------------------------------SIK----------------S--------------------QDRVEGGVITYEH-VKKTIMYFLKDCEK--PPRIGERVRFDIYMVKRNKECIAVNVQQVSLH--------------------------------------------------------- |
6 | 6y4hA | 0.38 | 0.13 | 3.86 | 1.33 | FFAS-3D | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSDAGQVYRGFIAVMKENFGFIETLSHDEEVFFHFSNYMGNPNWLELGQEVEYTLARNGNTSLPAENVRMLPKNSIPQPAVLETTHNGVVARPLRCINPDQQEYAGLIEILDELRTTVSQHEFGITSLVNKRDLLQKGDLVSFRIDESGRAACVNAVRQK------------------------------------------------------------------------------------------------------------------------------- |
7 | 3go5A | 0.15 | 0.08 | 2.86 | 1.38 | SPARKS-K | | ----------------------------------------------------------------------------------GNTNLASFIVGLIIDENDR------------------FYFVQKD-GQTYALAKEEG------QHTVGDTVKGFAYTDKQK--LRLTTLEVTA--TQDQFGWGRVTEVRDLGVFVDTGLPDKEIVVSLDILPELKEWPKKGDQLYIRLEVDKKDRI-WGLLAYQEDFQRLARPAYN----------------------------------------------------NQNQN----------------------WPAIVYRLKLSGTFVYLP--ENNLGFIHPSERYA--EPRLGQVLDARVIGFREVDRTLNLSLK---PRSFELENDAQ--ILTYLESNGGFTLNDKSSPDDIKATFGISKGQFKKALGGLKAGKIK |
8 | 3go5A | 0.16 | 0.07 | 2.24 | 2.28 | CNFpred | | ---------SFIVGLIIDENDRFYFVQKD--GQTYALAKEE----GQHTVGDTVKGFAYTDM--KQKLRLTTL------EVTATQ--DQFGWGRVTEVR-----------------KDLGVFVDTGLDKEIVVSLDILPELKELWPKKGDQLYIRLEVDK-KDRIWGLLAYQ-YNNMQNQNWPAIVYRLKLSGTFVYLPENNMLGFIHPSERY---AEPRLGQVLDARVIGFRDRTLNLSL---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
9 | 2wp8J | 0.09 | 0.07 | 2.79 | 1.34 | MapAlign | | ---GGLKNGVLYQGNIQISNFLEGSVSLPRFSKPVLIVGQKNL--NRAFNGDQVIVELWKAPRSKKIQPTAKVVYIQR-------RSWRQYVGQLAPSSVDPQ-----------SSSTQNVFVILMDLPKVRIRTRRA-----AEL-LDKRIVISIDSWTTHKYPLGHFVRDLAEGHDWKARDKLICSIDINDALHAKKGNWEVGVHIAMLPMLLGTDLCSLKPYVDRFAFSVIWELKSVIRSRISVARKIYDAFPQTAMLRRHAAPFEILNEMLNTRKNMSISLESSKALADSLPYFNTLVRIMSTRCMMAAQYFYSGFRHYGLAVDIYMDCESTETGYVIKVFNNGIVVLVPKF-GVEGLIRLDNLDKPRDVYVFDKVEVQVRSVITSKRKAELLLK-------------------------------------------------------------- |
10 | 6y4hA | 0.38 | 0.13 | 3.92 | 2.02 | HHsearch | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGSDAGQVYRGFIAVMKENFGFIETLSHDEEVFFHFSNYMGNPNWLELGQEVEYTLARNGGNCLPAENVRMLPKNSIPQPAVLETTHNGVVARPLRCINPDQQEYAGLIEILDELTTVISQHEFGITSLVNKRDLLQKGDLVSFRIDE-----SGRAACVNAVRQK-------------------------------------------------------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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