>O75474 (233 residues) MPCRREEEEEAGEEAEGEEEEDDSFLLLQQSVTLGSSGEVDRLVAQIGETLQLDAAQDSP ASPCAPPGVPLRAPGPLAAAVPADKARPPAVPLLLPPASAETVGPAPSGALRCALGDRGR VRGRAAPYCVAEVAAGPSALPGPCRRGWLRDAVTSRRLQQRRWTQAGARAGDDDPHRLLQ QLVLSGNLIKEAVRRLQRAVAAVAATGPASAPGPGGGRSGPDRIALQPSGSLL |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | MPCRREEEEEAGEEAEGEEEEDDSFLLLQQSVTLGSSGEVDRLVAQIGETLQLDAAQDSPASPCAPPGVPLRAPGPLAAAVPADKARPPAVPLLLPPASAETVGPAPSGALRCALGDRGRVRGRAAPYCVAEVAAGPSALPGPCRRGWLRDAVTSRRLQQRRWTQAGARAGDDDPHRLLQQLVLSGNLIKEAVRRLQRAVAAVAATGPASAPGPGGGRSGPDRIALQPSGSLL |
Prediction | CCCHHHHHHHCCCCCCCCCCCCCCSSSSSSSSSCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC |
Confidence | 97324545410223222222455348865125417731599999999877612100249999877888999999998877786656788777788888865678888774133115643346888986544357888888987657777763234444312356656577889979999999983456999999988767777631788789999998889973127887879 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | MPCRREEEEEAGEEAEGEEEEDDSFLLLQQSVTLGSSGEVDRLVAQIGETLQLDAAQDSPASPCAPPGVPLRAPGPLAAAVPADKARPPAVPLLLPPASAETVGPAPSGALRCALGDRGRVRGRAAPYCVAEVAAGPSALPGPCRRGWLRDAVTSRRLQQRRWTQAGARAGDDDPHRLLQQLVLSGNLIKEAVRRLQRAVAAVAATGPASAPGPGGGRSGPDRIALQPSGSLL |
Prediction | 75155465564544464565543110103321414334403300440252141433654444344343443454444344144744444344354443436454443421221113444534534322333534544341423154334444442442444446446454566301400330045251034004314443451455246434456464644551404364446 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCHHHHHHHCCCCCCCCCCCCCCSSSSSSSSSCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC MPCRREEEEEAGEEAEGEEEEDDSFLLLQQSVTLGSSGEVDRLVAQIGETLQLDAAQDSPASPCAPPGVPLRAPGPLAAAVPADKARPPAVPLLLPPASAETVGPAPSGALRCALGDRGRVRGRAAPYCVAEVAAGPSALPGPCRRGWLRDAVTSRRLQQRRWTQAGARAGDDDPHRLLQQLVLSGNLIKEAVRRLQRAVAAVAATGPASAPGPGGGRSGPDRIALQPSGSLL | |||||||||||||||||||
1 | 2dr1A | 0.12 | 0.12 | 4.13 | 0.52 | CEthreader | KEYRKVHMDTVERLREFLEVEKGEVLLVPSSGTVSKGGKVLVTIIGAFGKRYKEVVESNGRKAVVLEYEPGKAVKPEDLDDALRKNPDVEAVTITYNETSTGVLNPLPEAVSAMGGADIKFDKWGLDVVFSSSQKAFGVPPGLAIGIPLYVKYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVREGVREIGLDILAEPGITAVLTPPGIKGDEVYEA | |||||||||||||
2 | 6gmhQ | 0.07 | 0.06 | 2.71 | 0.55 | EigenThreader | GGGGGGGGGGGGGGGGGGGGGGGGG-------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGNASQCFEKVLKAYPNNYETMKILGSLYAASEEKRDIAKGHLKKVTEQYPDDVEAWIELAQILEQTDIQGALSAYG | |||||||||||||
3 | 6y4bA | 0.08 | 0.08 | 3.00 | 0.47 | FFAS-3D | --------EQFILENSLIKNKPIKIVI---GISMQSPHSGDSFRAFVDLLRKTNEQCIRDENIRISELIVVITDGLHRHNLRLYKNVSTTEAESEAAGLGQKWVADNRQFLEAIGQCGISYKVIH----WEELKSVAFEEYEKPNSEFRSINLTQTHLEKLVNFLLETRDSSFTQEDCVSATR--KYLLEEAASAFEFASLKLSESNPLPFIEYGMRGGKKLPSFWKEES--- | |||||||||||||
4 | 5mqfM | 0.12 | 0.11 | 3.80 | 0.86 | SPARKS-K | RSGHFEKARDVYEEAIRT---------------VMTVRDFTQVFDSYAQ---FEESMIAAKMETASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEWHKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHLWVAFAKFYEDNDARVILEKATKVNFKQVDDLASVWCQCGELELEALRLLRKATALPARRA----EYFDGSEPVQNRVYKSLKVWSM | |||||||||||||
5 | 2jswA | 0.15 | 0.03 | 1.16 | 0.44 | CNFpred | ----------------------------------------------------------------------------------------------------------------------------------------------------ASAAQRELVAQGKVGAIPANALD---DGQWSQGLISAARMVAAATNNLCEAANAAVQ---------------------------- | |||||||||||||
6 | 6rc9A | 0.05 | 0.04 | 1.77 | 0.67 | DEthreader | ----------NAINPRLTPWTYRNSE-----LEMFGLKL-DFGPTPWRPWLFEAYFANIVVFGWPLLFSFEYVGDTADLQLDLDYVPWIGYRNN-RSFKWSYTLLPALVETYFSP------TLITPGLAWTGGWLVTF------W--FRGSSVWD-LKGVWADQAQ---SDS-----PE-HP-----NA--LA--FQ--V-SVVEAKPKKVT-----Q---S-D-KLDLKNLD | |||||||||||||
7 | 6w0pA | 0.05 | 0.05 | 2.27 | 0.82 | MapAlign | RDIALTKLKEAFADLVKKNQKFFNHFYQKSDILIDGDSDQQGIRYCLFQMIQAGEAYSGHAFWDNETYCLPFYLYSNQEAAKDLIMFRYNTLEEAKARAKELDSIGACFPVATRNGKEACNLWQHASTYHYMKIYNDHKFMQNYGIEMLVEISKFLLSRGQYNQDKTKFSFHNTYTNFMAKKCFQYLDKILKKDLAKMKDASRKMVILYDKETLLFEQNDGFFDMPHVDIKTI | |||||||||||||
8 | 4k0mC | 0.17 | 0.13 | 4.38 | 0.60 | MUSTER | -------KVYTIDEAARTAKFDET---VEVHAKLGIDP----------------SDQNVRGTVSLPHGLGKQRVLAIAKGEKIKEAEEAGADYVGGEEIIQAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA------------------------AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | |||||||||||||
9 | 2pffB | 0.19 | 0.18 | 5.82 | 0.50 | HHsearch | MAKRPFDKNSALFRAVGEGNAQLVAIFGGQGNTDDYFEELRDLIKFSAETLSLDAEKVFTQGLNI--LEWLENPSNYLLSIPIYVVTA-KL-LGFTPGELRSYLKGHSQGLETDSWCYEAYPNTSLPPSILEDEGVSSNLTQEQVQDYVNKTN--SHLPAG--KQVEIGAVVSGPPQSLYGLNL--TLRKAKARKLKFSNRFLPVASPSHLLVPASDLINKDLVKNNVSFNCI | |||||||||||||
10 | 6bx3B | 0.09 | 0.09 | 3.31 | 0.49 | CEthreader | -NILLQDPFAVLKEHPEKLTHTIENPLRTECLQFSPCGDYLALGCANGALVIYDMDTFRPICVPGNMLGAHVRPITSIAWSPDGRLKEIRFDSPIWGCQWLDAKRRLCVATIFEESDAYVIDFSNDPVASLLSKSVLVCTVHTKHPNIIIVGTSKGWLDFYKFHSLYQTECIHSQNGERLAINCSDRTIRQYEISIDDENSAVELTLEHKYQDVINKLQWNCILFSNNTAEYL | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |