Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620 640 660 680 700
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCHHHHHCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSCCCCCHHHHHHHHHCCCCCCC MRPGTGAERGGLMVSEMESHPPSQGPGDGERRLSGSSLCSGSWVSADGFLRRRPSMGHPGMHYAPMGMHPMGQRANMPPVPHGMMPQMMPPMGGPPMGQMPGMMSSVMPGMMMSHMSQASMQPALPPGVNSMDVAAGTASGAKSMWTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNSQTKESRWAKPKELEDLEGYQNTIVAGSLITKSNLHAMIKAEESSKQEECTTTSTAPVPTTEIPTTMSTMAAAEAAAAVVAAAAAAAAAAAAANANASTSASNTVSGTVPVVPEPEVTSIVATVVDNENTVTISTEEQAQLTSTPAIQDQSVEVSSNTGEETSKQETVADFTPKKEEEESQPAKKTYTWNTKEEAKQAFKELLKEKRVPSNASWEQAMKMIINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEAKESFQRFLENHEKMTSTTRYKKAEQMFGEMEVWNAISERDRLEIYEDVLFFLSKKEKEQAKQLRKRNWEALKNILDNMANVTYSTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEEKQKSLLRERRRQRKNRESFQIFLDELHEHGQLHSMSSWMELYPTISSDIRFTNMLGQPGSTALDLFKFYVEDLKARYHDEKKIIKDILKDKGFVVEVNTTFEDFVAIISSTKRSTT |
1 | 4xriA | 0.07 | 0.06 | 2.55 | 1.13 | EigenThreader | | --------PDINIILENSLSPDATLRHAAEQQLTHAAETNFSQYLLTLVQALANESSEGHIRAAAGIALKNAFSAREFARQAALQAKWLNQ-----------------------------------------TDQETRTRVKQLALETLASPNSKAGAQVIAAIAAIELPRNQWPELMHALVRNASEG----------------------GQHQKQASLTAIGFICETLVGHSNAILTAVVQGARKEEAITALGDSLEFVGNNFKHEGERNYIMQVVCEATQSTVCEEEIAIEDDNAQVESSEQMRPFYNLTKQDED----------ASDDEYNISRAAYQCLQLYAQAVGSTIIPPVIQFVEHNLR--HADWHFRDAAVSAFGAIMDGPEEKVLEPIVKTGMQPLIAMMEDESIQVRDSTAYALGRITEACSEAIDPNTHLEPLIRSLFNGLMNSPKMAASCCWALMNIAERFAGAAQNPLTPHFNQSVTNLLTVTNGDSTVRTAAYEVLSVFVQNDSLSAVASLSTVILQRLEETLPLQQQVV--SVEDKLILEDMQTSLCTVLQATVQRLDKEIAPQGDRIMQVLLQILSPEGVFAAISALANAMEEEFAKYMEAFAPFLYNALGNQEEPSLCSMAIGLVSDVTRSLGERSQPYCDNFMNYLLGNLRSTTYLTIVAQVLQQAATITAGPDGSYEMIDYVISLREGIMD |
2 | 6n7pJ | 0.13 | 0.04 | 1.22 | 1.06 | FFAS-3D | | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DRIARDNFKSLLREPIKIKANTRWSDIYPHIKSDPRFLHMNGSSCLDLFLDFVDEQRMYIFAQRSIAQQTLIDQ---NFEWNDADSDEITKQNIEKVLENDRKFDK------VDKEDISLIVDGLIKQRNEKIQQKLQNER----RILEQKKHYFWLLLQRTYTKTGKPKPSTWDLASKELGESLEYKAL-GDEDNIRRQIFEDFKPE-------------------------------------------- |
3 | 5a9qA | 0.08 | 0.08 | 2.95 | 1.10 | SPARKS-K | | VIENSESLDCQLLAVTHAGVRLYFSTCPFRRPNTLTLVHVRLPPGFSASSTVEKPSKVHRALYSK-GILLMAASENDND-ILWCVNHDTFPFQKPMMETQMTAGVDGHSWALSAIDTPLNKDHIPITDSPVVVQQHMLPP--------------KKFVLLSAQGSLMFHKL----RPVDQLRHLL---------------------------VEIERFFKLHQILACSTCDREVSAWATRAFFRYGGEAQMRFTTLPVYDASLVVESSVPCQLLESVLQELKGLQEFLDRNSQFAGGEAQLSTIIVAELQKELQEQLKITTFKDLVIRD--KELTGALIASLINCYIRDNAAQKISNQVDVELSLTAAEKKDPQGLGLHFYKHGEPEEDFQERLNSYKCITDTLQELV-----EAGHHFEQMLKLSQRLF------SIALYNWLIQVDLADKLLQLVRMAKRYMDLLWRYYEKNRS------FSNAARVLSRLDMHTEISLQQRLEYIARAILSAEFLHELEEKMEVARIQLQIQETLQRQYSHHSSVQ--DAVSQLDSELMDITKGEFFKL-AECKLAIIHCAPILVQTLWQDIIEKELSDSSDRMHALSLKIVLLGKIYAGTPRFFPL------DFIVQFLEQQVCTLNWDVGFVIQTMNEILEVYDQLFKSIHVLLIRYVENPSRRFTNLDAVCGYLVELQSMSSSVA |
4 | 1vt4I | 0.05 | 0.04 | 1.92 | 1.53 | MapAlign | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-----------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG----------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG----------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-------------------------------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-----GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--GGGGGGGGGGGGGGGGGGGGGGGGGGGG------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GGGGGGGGGGGGGGGGGGGGGGGGG--GGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---------------GGGGGGGGGGGGGGGGGGGGGGG-------- |
5 | 6n7pJ | 0.13 | 0.03 | 1.18 | 2.59 | HHsearch | | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DRIARDNFKSLLREPIKIKANTRWSDIYPHIKSDPRFLHMNGSSCLDLFLDFVDEQRMYIFAQ--------RSIAQQTLIDQNEWNDEITKQNIEKVLEN------DRKFDKVDKEDISLIVDGLIKQRNEKIQQK---LQNERRI-LEQKKHYFWLLLQRTYTKTGKPKPSTWDLASKELGESLEYKALGD-EDNIRRQIFEDFKPE-------------------------------------------- |
6 | 2jktA | 0.08 | 0.06 | 2.43 | 1.10 | EigenThreader | | AVSKGDGMRGLAVFISDIRNCKSKEAEIKRINKELANIRSKFKGDKALDLGHDIDFGHMEAVNLLSSNRYTEKQIGYLFISVLVNSNSELIRLINNAIKNDLASRNPTFMGLALHCIANVGSREMAEAFAG---------------------------------------------EIPKILVAGDTM----------------------DSVKQSAALCLLRLYRTS------------------------------PDLVPMGDWTSRVVHLLNDGVVTAATSLITTLAQ--------KNPEEFKTTSASTDLQDYTYYFVPA------PWLSVKLLRLLQCYPPPEDPAVRGRLTECLETILNKAQEPPKSKKAVLFEAISLIIHHDSEPNLLVRACNQLGQFLQHRETNLRYLALESMCTLASSEFSHEAVKTHIETVINALKTE--------RDVSVRQRAVDLLYA----MCDRSNAQQIVAEML--SYLETADYSIREEIVLKVAILAEKYAV--------DYTWYVDTILNLIRIAGDYVSEEVWYRVIQIVINRD-------DVQGYAAKTVFEALKVGGYILGEFLIQFNLLHSKFHPTRALLLSTYIKFVNLFPEV--------KATIQDVLRSDSQLK-NADVELQQRAVEYLRLSTVASTDILATVL------------EEMP---------PFPERE |
7 | 4fqgA | 0.18 | 0.05 | 1.51 | 1.03 | FFAS-3D | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SHMKREEAIQNFKALLSDMVRSSDVSWSDTRRTLRKDHRWESGSEREEKEKLFNEHIEALT-----------KKKREHFRQLLDETSAITLTSTWKEVKKIIKEDPRCIKFSDRKKQREFEEYIRDKYITAKADFRTLLKETKFITYRSKKLI--QESDQHLKDVEKILQNDKRYLVL----DCVPEERRKLIVAYVDD---------------------------------------------------------------------------------------------------------------------------- |
8 | 4fqgA | 0.21 | 0.05 | 1.65 | 1.04 | SPARKS-K | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SHMKREEAIQNFKALLSDMVRSSDVSWSDTRRTLRKDHRWESGSLLER---------EEKEKLFNEHIEALTKKKREHFRQLLDETSAITLTSTWKEVKKIIKEDPRCIKFSDRKKQREFEEYIRDKYITAKADFRTLLKET-----------KFITYRSKLKDVEKILQ------NDKRYLVLDPEERRKLIVAYVDD---------------------------------------------------------------------------------------------------------------------------- |
9 | 2pffB | 0.04 | 0.04 | 2.13 | 1.47 | MapAlign | | LSELIRTTLDAEKVFTQGLNILEWLENPSNTPDKDYLLSIPISCPLIGVIQLAHYVVTAKLLGFTPGELRSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRKAITVLFFIGVRCYEAYPNTSLPPSILEDSLENNEGVPSPMLVQVTNLPAGKQVEISAKNLVVSGPPQSLYGLNLTLRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGMGMDLYKTSKAAQDVWNRADNHFKDTILDIVIPVNLTIHFGGEKGKRIRENYSHST---SYTFRSEKGL--LSATQFTQPALTLMEKAAFEDLKLVEVVFYRGMTMQVVAASFSQEALQYVVERVGKRE-NQQYVAAGDLDTVSLSLEEVGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
10 | 4fqgA | 0.19 | 0.05 | 1.50 | 2.26 | HHsearch | | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SHMKREEAIQNFKALLSD-MVRSSDVSWSDTRRTLRKDHRWESGSREEKEKLFNEHIEALTKK-----------KREHFRQLLDETSAITLTSTWKEVKKIIKE------DPRCIKFSSSKKQREFEEYIRDKYIT------------------AKADFRTLLKE---TKFITYDQHLKDVEKILQNDKRYLVLDCV-PEERRKLIVAYVDD-------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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