>O75344 (146 residues) MGGSALNQGVLEGDDAPGQSLYERLSQRMLDISGDRGVLKDVIREGAGDLVAPDASVLVK YSGYLEHMDRPFDSNYFRKTPRLMKLGEDITLWGMELGLLSMRRGELARFLFKPNYAYGT LGCPPLIPPNTTVLFEIELLDFLDCA |
Sequence |
20 40 60 80 100 120 140 | | | | | | | MGGSALNQGVLEGDDAPGQSLYERLSQRMLDISGDRGVLKDVIREGAGDLVAPDASVLVKYSGYLEHMDRPFDSNYFRKTPRLMKLGEDITLWGMELGLLSMRRGELARFLFKPNYAYGTLGCPPLIPPNTTVLFEIELLDFLDCA |
Prediction | CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCSSCCCCSSSSSSSCCCCCCCCCCCSSSSSSSSSSSSCCSSSCCCCCCCCCSSSSCCCCCSSCHHHHHHHCCCCCCSSSSSSCCCCCCCCCCCCCCCCCCCSSSSSSSSSSSSCCC |
Confidence | 97568878998764533363899962557725659957999996488999999968999999999349944235666897579975998374349999852999928999988424757789999979994699999998775489 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 | | | | | | | MGGSALNQGVLEGDDAPGQSLYERLSQRMLDISGDRGVLKDVIREGAGDLVAPDASVLVKYSGYLEHMDRPFDSNYFRKTPRLMKLGEDITLWGMELGLLSMRRGELARFLFKPNYAYGTLGCPPLIPPNTTVLFEIELLDFLDCA |
Prediction | 87464455543665566355226615756552437440313124527375156634030203020336744111137474315050456300400330054045424030201252011653345603240202020302523578 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 | | | | | | | | |||||||||||||
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SS Seq | CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCSSCCCCSSSSSSSCCCCCCCCCCCSSSSSSSSSSSSCCSSSCCCCCCCCCSSSSCCCCCSSCHHHHHHHCCCCCCSSSSSSCCCCCCCCCCCCCCCCCCCSSSSSSSSSSSSCCC MGGSALNQGVLEGDDAPGQSLYERLSQRMLDISGDRGVLKDVIREGAGDLVAPDASVLVKYSGYLEHMDRPFDSNYFRKTPRLMKLGEDITLWGMELGLLSMRRGELARFLFKPNYAYGTLGCPPLIPPNTTVLFEIELLDFLDCA | |||||||||||||||||||
1 | 1jvwA | 0.25 | 0.23 | 7.23 | 1.33 | DEthreader | -ASH-EER-MNNYRKRVGRLFMEQKAAQAVKLPS--GLVFQRIARGSGKRAPADDKCEVHYTGRLR-DGTVFDSSRERGKPTTFRP--NEVIKGWTEALQLMREGDRWRLFIPYDLAYGTGGGG-MIPPYSPLEFDVELISIKDGK | |||||||||||||
2 | 3oe2A | 0.25 | 0.23 | 7.01 | 2.45 | SPARKS-K | -----GTDAPTEAALKAERTFMAGEKAKPGVKELADGILMTELTPGTGPKPDANGRVEVRYVGRLPD-GKIFDQS---TQPQWFRL--DSVISGWTSALQNMPTGAKWRLVIPSDQAYGAEGAGDLIDPFTPLVFEIELIAVSQ-- | |||||||||||||
3 | 1fd9A | 0.22 | 0.20 | 6.25 | 1.00 | MapAlign | -------------NKVKGEAFLTENKNKPGVVVLPSGLQYKVINSGNGVKPGKSDTVTVEYTGRLI-DGTVFDSTEKTGKPATFQVS--QVIPGWTEALQLMPAGSTWEIYVPSGLAYGPRSVGGPIGPNETLIFKIHLISVKKS- | |||||||||||||
4 | 1fd9A | 0.21 | 0.21 | 6.52 | 0.67 | CEthreader | AKRTAEFNKKADENKVKGEAFLTENKNKPGVVVLPSGLQYKVINSGNGVKPGKSDTVTVEYTGRLID-GTVFDSTEKTGKPATFQVS--QVIPGWTEALQLMPAGSTWEIYVPSGLAYGPRSVGGPIGPNETLIFKIHLISVKKS- | |||||||||||||
5 | 3oe2A | 0.24 | 0.22 | 6.83 | 2.20 | MUSTER | -----GTDAPTEAALKAERTFMAGEKAKPGVKELADGILMTELTPGTGPKPDANGRVEVRYVGRLPD-GKIFDQS---TQPQWFRLDS--VISGWTSALQNMPTGAKWRLVIPSDQAYGAEGAGDLIDPFTPLVFEIELIAVSQ-- | |||||||||||||
6 | 1q6uA | 0.27 | 0.26 | 8.00 | 1.88 | HHsearch | LSDQEKMEKDAADNEAKGKEYREKFAKEKGVKTSSTGLVYQVVEAGKGEAPKDSDTVVVNYKGTLID-GKEFDNSYTRGEPLSFRLD--GVIPGWTEGLKNIKKGGKIKLVIPPELAYGKAGVPG-IPPNSTLVFDVELLDVKPAP | |||||||||||||
7 | 3uf8A2 | 0.32 | 0.25 | 7.42 | 2.28 | FFAS-3D | ------------------------------VVTTESGLKYEDLTEGSGAEARAGQTVSVHYTGWLTD-GQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTIPPQLGYGARGAAGVIPPNATLVFEVELLDV---- | |||||||||||||
8 | 1fd9A | 0.21 | 0.21 | 6.51 | 1.18 | EigenThreader | AKRTAEFNKKADENKVKGEAFLTENKNKGVVVLP-SGLQYKVINSGNGVKPGKSDTVTVEYTGRLI-DGTVFDSTEKTGKPATFQVS--QVIPGWTEALQLMPAGSTWEIYVPSGLAYGPRSVGGPIGPNETLIFKIHLISVKKS- | |||||||||||||
9 | 1fd9A | 0.21 | 0.21 | 6.52 | 2.26 | CNFpred | AKRTAEFNKKADENKVKGEAFLTENKNKPGVVVLPSGLQYKVINSGNGVKPGKSDTVTVEYTGRLID-GTVFDSTEKTGKPATFQVS--QVIPGWTEALQLMPAGSTWEIYVPSGLAYGPRSVGGPIGPNETLIFKIHLISVKKS- | |||||||||||||
10 | 1q6uA | 0.29 | 0.27 | 8.12 | 1.33 | DEthreader | ---A--EK-AAD-NEAKGKEYREKFAKEVKTSST--GLVYQVVEAGKGEAPKDSDTVVVNYKGTLI-DGKEFDNSYTRGEPLSFRLD--GVIPGWTEGLKNIKKGGKIKLVIPPELAYGKAGVPG-IPPNSTLVFDVELLDVKPAP | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |