Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHCCCSSSSSSCCCCCCCSCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCSSSSSSSSSSSSSSSCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC MYAPGGAGLPGGRRRRSPGGSALPKQPERSLASALPGALSITALCTALAEPAWLHIHGGTCSRQELGVSDVLGYVHPDLLKDFCMNPQTVLLLRVIAAFCFLGILCSLSAFLLDVFGPKHPALKITRRYAFAHILTVLQCATVIGFSYWASELILAQQQQHKKYHGSQVYVTFAVSFYLVAGAGGASILATAANLLRHYPTEEEEQALELLSEMEENEPYPAEYEVINQFQPPPAYTP |
1 | 1qoyA | 0.04 | 0.03 | 1.58 | 1.00 | DEthreader | | --------------------AIETADGADLKYLDQVI-P-WQTFDETIK-E---------------LSRFK--------Q--EYSQ-AASVLVGDIKTLLMDSQDKYFEATQTVYEWCAVDDGITKLNEQKSLLVSSQSFNNASGKLLALDSQLTNDFSSYFQSQVIELKLSVQNFFTTLSNTVKQANKDIDAAKLKLTEIAAIGEIKTETETTRF--YVDYDD-MLSLLKEKMNTCN |
2 | 5b2gA | 0.13 | 0.10 | 3.53 | 1.13 | MapAlign | | -SRWYNQTPNRAKRVITTFRTGTWDAYGLQVMGIALAVLGWLAVMLCCALPMWRVTAFVTSQTIWEGLWMNCVVQSGQMQCKVYDSLLALQDLQAARALVIISIIVAALGVLLSVVGDESAKAKTMIVAGVVFLLAGLMVIVPVSWTAHNIIQDFYNPLV-----ASGQKREMGASLYVGWAASGLLLLGGGLLCCS----------------------------------------- |
3 | 3x29A | 0.13 | 0.09 | 3.05 | 1.65 | HHsearch | | --------------------------SGLQLLGYFLALGGWVGIIASTALPQWKQSSYAGDAGLYEGLWMSCAS-----GQVQCKLYD--GHIQSARALMVVAVLLGFVAMVLSVVGMKNAKSRVAISGGALFLLAGLCTLTA--VSWYATLVTQEF-F--NPSTPVNARYEFGPALFVGWASAGLAMLGGSFLAAT----------------------------------------- |
4 | 3x29A | 0.10 | 0.07 | 2.48 | 1.10 | FFAS-3D | | -----------------------------QLLGYFLALGGWVGIIASTALPQWKQSSYAGDAILYEGLWMSCASGQVQCKLYDGHIQSARALMVVAVLLGFVAMVLSVVGM-----KNPTAKSRVAISGGALFLLAGLCTL--TAVSWYATLVTQEFF---NPSTPVNARYEFGPALFVGWASAGLAMLGGSFLAAT----------------------------------------- |
5 | 7nmqA | 0.10 | 0.08 | 2.83 | 1.00 | DEthreader | | ----------------------YALGPEGLKKALAETGSHILVMDLYAKTMIKQPNVNLSNI-------------------LKNIHL-NQELSRINANYWLTAKPQIQKTARNIVNYDEQFDLITTINTSKEVTDVIKMLQDFKGKLYQNSTDFKNNVGGLTAILGQAAVLTAKETLAYLYQTVDQAILSLTNIQKQNTMGANYTDLLDNIDSMQDHKFS-------D--KAKESWNH |
6 | 6w2wA | 0.15 | 0.13 | 4.37 | 0.73 | SPARKS-K | | SEEVNERVKQLAEKAKEATDKEEVIEIVKELAELAKQVAEIVYQLAEVAEHS---------TDPELILQEALRLAEEQGDE----------ELAEAARLALKAARLLEEARQLLSKDPENEAAKECLKAVRAALEAALLALLLLAKATAALRAVEAACQLAKQYPNSD----IAKKCIKAASEAAEEASKAAEEAQRHPDSQKARDEIKEASQKAEEVKERCERA------------- |
7 | 5b2gA2 | 0.14 | 0.10 | 3.30 | 1.11 | MapAlign | | ----------------------------LQVMGIALAVLGWLAVMLCCALPMWRVTAFVTSQTIWEGLWMNCVVQSGQMQCKVYDSLLALQDLQAARALVIISIIVAALGVLLSVVGDESAKAKTMIVAGVVFLLAGLMVIVPVSWTAHNIIQDFYNPLV-----ASGQKREMGASLYVGWAASGLLLLGGGLLCCS----------------------------------------- |
8 | 5vhxE | 0.15 | 0.11 | 3.80 | 0.95 | CEthreader | | ----------------------KTSRRGRALLAVALNLLALLFATTAFLTTYWCQGTQRQLRRFHTGIWYSCEEGEKCRSFIDLAPASEKGVLWLSVVSEVLYILLLVVGFSLMCLELLHSSDG-LKLNAFAAVFTVLSGLLGMVAHMMYTQVFQVTVSL-GPEDWRPHSWDYGWSFCLAWGSFTCCMAASVTTLNSYTK-------------------------------------- |
9 | 5vhxE | 0.16 | 0.11 | 3.79 | 0.75 | MUSTER | | -----------KTSRRG-----------RALLAVALNLLALLFATTAFLTTYWCQGTQRVPFQLRRFHTYSCEEGEKCRSFIDLAPASEKGVLWLSVVSEVLYILLLVVGFSLMCLELLHSGLKLNAFAAVFTVLSGLLGMVAHMMYTQVFQVTVSLGPEDWRPHSW----DYGWSFCLAWGSFTCCMAASVTTLNSYTK-------------------------------------- |
10 | 6ov2A | 0.15 | 0.11 | 3.52 | 1.58 | HHsearch | | ---------------------------GLELLGMTLAVLGWLGTLVSCALPLWKVTAFIGNQVVWEGLWMSCVVQS--TGQMQCKLPQ---DLQAARALCVIALLLALLGLLVAITGAQCAKARIVLTAGVILLLAGILVLI--PVCWTAHAIIQDF---YNPLVAEALKRELGASLYLGWAAAALLMLGGGLLCCTCP--------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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