Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340
| | | | | | | | | | | | | | | | | |
| SS Seq | CCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSSSSSSCCCCCSSSSSSSSSSSSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHCC KYNFFTFLPGVLFNQFKYFFNLYFLLLACSQFVPEMRLGALYTYWVPLGFVLAVTVIREAVEEIRCYVRALVVVSLVMVALQHFAGRWYLQIIRFLLLFSNIIPISLRVNLDMGKIVYSWVIRRDSKNSYKRSAALSQFVIHRSLCISTMQAVFSSVFYFASVPLYQGFLIIGYSTIYTMFPVFSLVLDKDVKSEVAMLYPELYKDLLKGRPLSYKTFLIWVLISIYQGSTIMYGALLLFESEFVHIVAISFTSLILTELLMVALTIQTWHWLMTVAELLSLACYIASLVFLHEFIDVYFIATLSFLWKVSVITLVSCLPLYVLKYLRRRFSPPSYSKLTS |
1 | 6lcpA | 0.15 | 0.12 | 3.93 | 1.17 | DEthreader | | ----ILDIELNNA-E---YYEKIDQP---------------------------------------HDEDMTF----------Q-----------------------RLQDGVPDTIRFLQRLVLHGRWSYRRLAETISNFFYKNMIWTWSIFWYQCYCNFDIAYIFEYTYILMFNLFFTSVPVILMVLDQDVSDTVSLAVPQLYRRGIERKEWTQTKFWLYMIDGVYQSVMSFFIPFIFVVSERTRLGAYIAHPAVITINGYILINTYRWDWLMLLSIVLSDVFIFFWTGVYTASFAAQVYQELTFWMCLIVTPALCLLPRLVVKCIQKQRFPYDVDIIRE |
2 | 7ky5A1 | 0.17 | 0.15 | 5.02 | 2.49 | SPARKS-K | | QGNFAVIIDGDALKVALNLLCKNCKAVLCCRVSP--------------------AQKAAVVKLVKKTLD--VMTLAIGDGSNDIAGEEGRQAVMCS-------DYAIGQF-----RYVTRLVLVHGKWCYKRLAEMIPQFFYKNVIFTLSLFWYGIYNNFDGSYLFEYTYLTFYNLAFTSVPVILLAVDQDVSDTVSMLVPQLYRVGILRKEWNQTKFLWYMLDGVYQSVICFFFPYLAYHDHRYFVGVFVTAIAVTSCNFYVFMEQYRWDWFCGLFICLSLAVFYGWTGIWTSSGAARVFAQPAYWAVLFVGVLFCLLPRFTIDCIRKIFYPKDIEIVRE |
3 | 6lcpA | 0.14 | 0.14 | 4.79 | 1.63 | MapAlign | | EDLAGKNGPEQQQATEHFMLALALCHTVVALVATARDMGFTVLGMSDGGINVNDMRRETAQHLEMFAVEGLRTLCIAERELSEEEYREWRREHDLAATAVMSSDFAIGQFRFLQRLVL-----VHGRWSYRRLAETISNFFYKNMIWTWSIFWYQCYCNFDIAYIFEYTYILMFNLFFTSVPVILMGLDQDVSDTVSLAVPQLYRRGIERKEWTQTKFWLYMIDGVYQSVMSFFIPFIFVVSERTRLGAYIAHPAVITINGYILINTYRWDWLMLLSIVLSDVFIFFWTGVYFYQAAPQVYQELTFWMCLIVTPALCLLPRLVVKCIQKQRFPYDVDIIRE |
4 | 6lcpA | 0.13 | 0.13 | 4.37 | 1.10 | CEthreader | | DDEELKRARKDHNAPSPTYALVIDGFTLRWVLSDSLKQKFLLLCKQCKSVLCCRVSPAQKAAVVSMVKGLDVMTLSIGDGANDIAGEEGRQAVMSS-------DFAIGQFRFLQRLV-----LVHGRWSYRRLAETISNFFYKNMIWTWSIFWYQCYCNFDIAYIFEYTYILMFNLFFTSVPVILMGVDQDVSDTVSLAVPQLYRRGIERKEWTQTKFWLYMIDGVYQSVMSFFIPFIFVVSERTRLGAYIAHPAVITINGYILINTYRWDWLMLLSIVLSDVFIFFWTGVYTATAAPQVYQELTFWMCLIVTPALCLLPRLVVKCIQKQRFPYDVDIIRE |
5 | 6k7gA4 | 0.19 | 0.11 | 3.69 | 1.61 | MUSTER | | ------------------------------------------------------------------------------------------------------------------------------AWNYNRVSKCILYCFYKNIVLYIIEIWFAFVNGFSGQILFERWCIGLYNVMFTAMPPLTLGI-RSCRKENMLKYPELYKTSQNALDFNTKVFWVHCLNGLFHSVILFWFPLKALQSDYLLLGNFVYTFVVITVCLKAGLETSYWTWFSHIAIWGSIALWVVFFGIYSSLEAAMLFSSGVFWMGLLFIPVASLLLDVVYKVIKRTAFK-------- |
6 | 6rohA3 | 0.18 | 0.16 | 5.36 | 3.80 | HHsearch | | GKSLGFALEPELEDYLLTVAKL-CKAVICCRVSPLQKAL-VVKMVKSSSLLLAIGDGANDVSMIQA--------AHVGVGIS---GMEGMQAARSA-------DIAVGQFKFLKKLL-----LVHGSWSYQRISVAILYSFYKNTALYMTQFWYVFANAFSGQSIMESWTMSFYNLFFTVWPPFVIVFDQFVSSRLLERYPQLYKLGQKGQFFSVYIFWGWIINGFFHSAIVFIGTILIYRYDHWSWGVTVYTTSVIIVLGKAALVTNQWTKFTLIAIPGSLLFWLIFFPIYASIFVKHTYGSGVFWLTLIVLPIFALVRDFLWKYYKRMYEPETYHVQQF |
7 | 6lcpA4 | 0.14 | 0.14 | 4.69 | 1.77 | FFAS-3D | | --TFWAAVPYISLEIVRTLQAFFIISDDVGQIEYSDKTGTLTQNVDGVPDTIALLADAGIKDVMTLSIGDGANDVAMIQEADVGVGIAG----------EEGRQAVMSSDFAIGQFFLQRLVLVHGRWSYRRLAETISNFFYKNMIWTWSIFWYQCYCNFDIAYIFEYTYILMFNLFFTSVPVILGVLDQDVSDTVSLAVPQLYRRGIERKEWTQTKFWLYMIDGVYQSVMSFFIPFIFVVSERTRLGAYIAHPAVITINGYILINTYRWDWLMLLSIVLSDVFIFFWTGVYTATAAPQVYQELTFWMCLIVTPALCLLPRLVVKCIQKQRFPYDVDIIRE |
8 | 6lknA | 0.14 | 0.13 | 4.33 | 1.63 | EigenThreader | | SERK--EDRLHELLIEYRKKLLHEF------PKSTRSFKKAWTEHQEYGIDGSTLSLILNSIFLQICMKCTAVLCCR------MAPLQKAQIVRMVKNLKGSPIGIKGKEGRQAARNSDYSVPKFKHAHGHLYYVRIAHLVQYFFYKNLCFILPQFLYQFFCPLYDAAYLTMYNICFTSLPILAYSLLEQHINIDTLTSDPRLYMKISGNAMLQLGPFLYWTFLAAFEGTVFFFGTYFLFVYGNWTFGTIVFTVLVFTVTLKLALDTRFWTWINHFVIWGSLAFYVFFSFFWGYFVFAQMLSSVSTWLAIILLIFISLFPEILLIVLKNVR---------- |
9 | 7ky6A | 0.17 | 0.15 | 5.01 | 2.22 | CNFpred | | ------------IRRKFLLLCKNCRAVLCCRVSPSQKAAVVKLVKDSDVMTLAIGDGSNDVAMIQ--------SADVGIGIA---GEEGRQAVMC-------SDYAIGQFRYLARLV-----LVHGRWSYKRLAEMIPEFFYKNMIFALALFWYGIYNDFDGSYLYEYTYMMFYNLAFTSLPVIFLILDQDVNDTISLVVPQLYRVGILRKEWNQRKFLWYMLDGLYQSIICFFFPYLVYH-HRYFVGVYVTTIAVISCNTYVLLHQYRWDWFSGLFIALSCLVVFAWTGIWSSKAAARIYGAPSFWAVFFVAVLFCLLPRFTYDSFQKFFYPTDVEIVRE |
10 | 7ky5A | 0.18 | 0.14 | 4.66 | 1.17 | DEthreader | | ---TVLDLEVNNT---Y--LYNAKLDYP-------------------------------------CPEDLTF----------NKDD--------------------RLQDGVPDSIRYVTRLVLHGKWCYKRLAEMIPQFFYKNVIFTLSLFWYGIYNNFDGSYLFEYTYLTFYNLAFTSVPVILLVLDQDVSDTVSMLVPQLYRVGILRKEWNQTKFLWYMLDGVYQSVICFFFPYLAYHMDRYFVGVFVTAIAVTSCNFYVFMEQYRWDWFCGLFICLSLAVFYGWTGIWTSSFGARVFAQPAYWAVLFVGVLFCLLPRFTIDCIRKIFYPKDIEIVRE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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