Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| SS Seq | CCCCCCSSHHHHHHHHHHHHSHCCCSSSSSSCCCCCCCSSSSCCCSSSSSSCCSSSSSSSSSCCCCCSSSCSSSSSSSSSSCCCCCCSSSSSSSCCCCCCCCCCSSSSCCSSSSSSCCCCCCCCCCCHHHHHCCCSSSSSSSSSSCCCCCSSSSSSSSCHHHSCCCCSSCCSSSSCCCCCSSSSHHHCCCSSSCCCCCCCCCCHHHHHHHHHHCCCCCCCCSSCCCCCCC MDSSNCKVIAPLLSQRYRRMVTKDGHSTLQMDGANRAFSIRFTDTAVVAHMDGKPNLIFQVANTRPSPLTSVRVSAVLYQERENGKLYQTSVDFHLDGISSDECPFFIFPLTYYHSITPSSPLATLLQHENPSHFELVVFLSAMQEGTGEICQRRTSYLPSEIMLHHCFASLLTRGSKGEYQIKMENFDKTVPEFPTPLVSKSPNRTDLDIHINGQSIDNFQISETGLTE |
1 | 2qksA | 0.24 | 0.20 | 6.37 | 1.17 | DEthreader | | R----T-DLKWRWFFVSLL-SIALATGAFIKMSQPKKRTLMFSEHAVISMRDGKLTLMFRVGNLRNSHMVSAQIRCKLLKSRQ--FLPLDQLELDVGFSTGADQLFLVSPLTICHVIDAKSPFYDLSQSMQTEQFEVVVILEGIVETTGMTCQARTSYTEDEVLWGHRFFPVISLE-EGFFKVDYSQFHATFEVPTPPYSEQEEM------------------------- |
2 | 3jycA2 | 0.27 | 0.23 | 7.08 | 3.73 | SPARKS-K | | -----NRFVKKNGQCNVEFTN----------MDKKRAQTLLFSHNAVVAMRDGKLCLMWRVGNLRKSHIVEAHVRAQLIKPRIGEYIPLDQIDIDVGFDKGLDRIFLVSPITILHEINEDSPLFGISRDLETDDFEIVVILEGMVEATAMTTQARSSYLASEILWGHRFEPVLFEE-KNQYKVDYSHFHKTYEVPTPRCSAKDLVENKFLLSNS---------------- |
3 | 1xl6A | 0.19 | 0.15 | 4.92 | 1.37 | MapAlign | | ----ITGLYLVTNALFALAYLRPGSFTDAYARFTRPTAGVLFSSRMVISDFEGKPTLMMRLANLRIEQIIEADVHLVLVRSEIEGMVFRRFHDLTL---TRSRSPIFSLSWTVMHPIDHHSPIYGETDETLRSHSEFLVLFTGHHEAFAQNVHARHAYSCDEIIWGGHFVDVFTTLPDGRRALDLGKFHEIAQH------------------------------------ |
4 | 3jycA | 0.27 | 0.24 | 7.34 | 1.11 | CEthreader | | QSIVGCIIDSFMIGAIMAKMA----------RPKKRAQTLLFSHNAVVAMRDGKLCLMWRVGNLRKSHIVEAHVRAQLIKPRIGEYIPLDQIDIDVGFDKGLDRIFLVSPITILHEINEDSPLFGISRDLETDDFEIVVILEGMVEATAMTTQARSSYLASEILWGHRFEPVLFEE-KNQYKVDYSHFHKTYEVPTPRCSAKDLVENKFLLSNS---------------- |
5 | 3jycA | 0.29 | 0.27 | 8.09 | 2.25 | MUSTER | | CVTEECPLAVFMVVVQSIVGCIIDGAIMAKMRPKKRAQTLLFSHNAVVAMRDGKLCLMWRVGNLRKSHIVEAHVRAQLIKPRIGEYIPLDQIDIDVGFDKGLDRIFLVSPITILHEINEDSPLFGISQDLETDDFEIVVILEGMVEATAMTTQARSSYLASEILWGHRFEPVLFE-EKNQYKVDYSHFHKTYEVPSTPRCSAKDLVENKFLLSNS--------------- |
6 | 3jycA | 0.28 | 0.24 | 7.46 | 3.67 | HHsearch | | QSIVGCIIDSFMIGAIMAKMA----------RPKKRAQTLLFSHNAVVAMRDGKLCLMWRVGNLRKSHIVEAHVRAQLIKPREGEYIPLDQIDIDVGFDKGLDRIFLVSPITILHEINEDSPLFGISRDLETDDFEIVVILEGMVEATAMTTQARSSYLASEILWGHRFEPVLF-EEKNQYKVDYSHFHKTYEVPTPRCSAKDLVENKFLLSNS---------------- |
7 | 3syaA2 | 0.29 | 0.24 | 7.27 | 2.46 | FFAS-3D | | ------------------RYVRKDGKCN---VPKKRAETLVFSTHAVISMRDGKLCLMFRVGDLRNSHIVEASIRAKLIKSKQTSEGEFIQTDINVGYYTGDDRLFLVSPLIISHEINQQSPFWEISKAQPKEELEIVVILEGMVEATGMTCQARSSYITSEILWGYRFTPVLTLE-DGFYEVDYNSFHETYET-STPSLSAKELAELAN-------------------- |
8 | 3syaA | 0.22 | 0.20 | 6.16 | 1.53 | EigenThreader | | CPEGIILLLIQSVLGSIVNAFMVGCMFVKISQPKKRAETLVFSTHAVISMRDGKLCLMFRVGDLRNSHIVEASIRAKLIKSQTGEFIPLNQTDINVGYYTGDDRLFLVSPLIISHEINQQSPFWEISKAQLPKELEIVVILEGMVEATGMTCQARSSYEIL--WGYR-FTPVLTLEG---FYEVDYNFHETYETSTPSLSANRAESN----------------------- |
9 | 3spgA | 0.28 | 0.24 | 7.31 | 3.03 | CNFpred | | QSIVGCIIDSFMIGAIMAKMAA----------PKKRAQTLLFSHNAVVAMRDGKLCLMWRVGNLRKSHIVEAHVRAQLIKPRIGEYIPLDQIDIDVGFDKGLDRIFLVSPITILHEINEDSPLFGISRDLETDDFEIVVILEGMVEATAMTTQARSSYLASEILWGHRFEPVLFEE-KNQYKVDYSHFHKTYEVPSPRCSAKDLVEN----------------------- |
10 | 3syaA | 0.25 | 0.21 | 6.60 | 1.17 | DEthreader | | K------LKWRFNLLIFVV-VNAFMVGCMFVISQKRAETLVFSTHAVISMRDGKLCLMFRVGDLRNSHIVEASIRAKLIKSKQ--FIPLNQTDINVGYYTGDDRLFLVSPLIISHEINQQSPFWEISKQLPKEELEIVVILEGMVEATGMTCQARSSYITSEILWGYRFTPVLTLE-DGFYEVDYNSFHETYETSTPSLSELAEL------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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