>O60825 (228 residues) MSGASSSEQNNNSYETKTPNLRMSEKKCSWASYMTNSPTLIVMIGLPARGKTYVSKKLTR YLNWIGVPTKVFNLGVYRREAVKSYKSYDFFRHDNEEAMKIRKQCALVALEDVKAYLTEE NGQIAVFDATNTTRERRDMILNFAEQNSFKVFFVESVCDDPDVIAANILEVKVSSPDYPE RNRENVMEDFLKRIECYKVTYRPLDPDNYDKDLSFIKVINVGQRFLVN |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | MSGASSSEQNNNSYETKTPNLRMSEKKCSWASYMTNSPTLIVMIGLPARGKTYVSKKLTRYLNWIGVPTKVFNLGVYRREAVKSYKSYDFFRHDNEEAMKIRKQCALVALEDVKAYLTEENGQIAVFDATNTTRERRDMILNFAEQNSFKVFFVESVCDDPDVIAANILEVKVSSPDYPERNRENVMEDFLKRIECYKVTYRPLDPDNYDKDLSFIKVINVGQRFLVN |
Prediction | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSCCCCCCHHHHHHHHHHHHHHCCCCSSSSSCCCCHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCSSSSSSCCCCCHHHHHHHHHHHHHHCCSSSSSSSSCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHSSSCCCCCCCCCCCCSSSSSSCCCSSSSC |
Confidence | 997555568998754558886447765555565689988999968999985799999999960139953898668510332146887331699998999999999999999999999975986999818887899999999999971995999999839699999999999724988789999999999999999864011327964444788769999578568829 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | MSGASSSEQNNNSYETKTPNLRMSEKKCSWASYMTNSPTLIVMIGLPARGKTYVSKKLTRYLNWIGVPTKVFNLGVYRREAVKSYKSYDFFRHDNEEAMKIRKQCALVALEDVKAYLTEENGQIAVFDATNTTRERRDMILNFAEQNSFKVFFVESVCDDPDVIAANILEVKVSSPDYPERNRENVMEDFLKRIECYKVTYRPLDPDNYDKDLSFIKVINVGQRFLVN |
Prediction | 855555544675434354452423654344244255120000000122321130042025205246140310202423443345534251033725623520340043005201410375602000010212245104201520573712000000204265003400440254143047243440152025204423531331457645560100000003431346 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
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SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSCCCCCCHHHHHHHHHHHHHHCCCCSSSSSCCCCHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCSSSSSSCCCCCHHHHHHHHHHHHHHCCSSSSSSSSCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHSSSCCCCCCCCCCCCSSSSSSCCCSSSSC MSGASSSEQNNNSYETKTPNLRMSEKKCSWASYMTNSPTLIVMIGLPARGKTYVSKKLTRYLNWIGVPTKVFNLGVYRREAVKSYKSYDFFRHDNEEAMKIRKQCALVALEDVKAYLTEENGQIAVFDATNTTRERRDMILNFAEQNSFKVFFVESVCDDPDVIAANILEVKVSSPDYPERNRENVMEDFLKRIECYKVTYRPLDPDNYDKDLSFIKVINVGQRFLVN | |||||||||||||||||||
1 | 2axnA | 0.72 | 0.60 | 17.06 | 1.17 | DEthreader | -----------------------------------NSPTVIVMVGLPARGKTYISKKLTRYLNWIGVPTKVFNVGEYRREAVK--QYSSNFFRDNEEAMKVRKQCALAALRDVKSYLAKEGGQIAVFDATNTTRERRHMILHFAKENDFKAFFIESVCDDPTVVASNIMEVKISSPDYKDCNSAEAMDDFMKRISCYEASYQPLDPKCDRD-LSLIKVIDVGRRFLVN | |||||||||||||
2 | 2axnA1 | 0.66 | 0.64 | 18.25 | 1.41 | SPARKS-K | --------LELTQSRVQKIWVPVDHRPSLPRSCGPNSPTVIVMVGLPARGKTYISKKLTRYLNWIGVPTKVFNVGEYRREAVKQYSSYNFFRPDNEEAMKVRKQCALAALRDVKSYLAKEGGQIAVFDATNTTRERRHMILHFAKENDFKAFFIESVCDDPTVVASNIMEVKISSPDYKDCNSAEAMDDFMKRISCYEASYQPLDPDKCDRDLSLIKVIDVGRRFLVN | |||||||||||||
3 | 2axnA | 0.75 | 0.64 | 18.02 | 1.03 | MapAlign | -----------------------------------NSPTVIVMVGLPARGKTYISKKLTRYLNWIGVPTKVFNVGEYRREAVKQYSSYNFFRPDNEEAMKVRKQCALAALRDVKSYLAKEGGQIAVFDATNTTRERRHMILHFAKENDFKAFFIESVCDDPTVVASNIMEVKISSPDYKDCNSAEAMDDFMKRISCYEASYQPLDPDKCDRDLSLIKVIDVGRRFLVN | |||||||||||||
4 | 2axnA | 0.66 | 0.64 | 18.25 | 0.80 | CEthreader | --------LELTQSRVQKIWVPVDHRPSLPRSCGPNSPTVIVMVGLPARGKTYISKKLTRYLNWIGVPTKVFNVGEYRREAVKQYSSYNFFRPDNEEAMKVRKQCALAALRDVKSYLAKEGGQIAVFDATNTTRERRHMILHFAKENDFKAFFIESVCDDPTVVASNIMEVKISSPDYKDCNSAEAMDDFMKRISCYEASYQPLDPDKCDRDLSLIKVIDVGRRFLVN | |||||||||||||
5 | 2axnA1 | 0.66 | 0.64 | 18.25 | 1.44 | MUSTER | --------LELTQSRVQKIWVPVDHRPSLPRSCGPNSPTVIVMVGLPARGKTYISKKLTRYLNWIGVPTKVFNVGEYRREAVKQYSSYNFFRPDNEEAMKVRKQCALAALRDVKSYLAKEGGQIAVFDATNTTRERRHMILHFAKENDFKAFFIESVCDDPTVVASNIMEVKISSPDYKDCNSAEAMDDFMKRISCYEASYQPLDPDKCDRDLSLIKVIDVGRRFLVN | |||||||||||||
6 | 2axnA | 0.67 | 0.64 | 18.37 | 1.35 | HHsearch | ------LELTQSRVQKIW-VPVDHRP-SLPRSCGPNSPTVIVMVGLPARGKTYISKKLTRYLNWIGVPTKVFNVGEYRREAVKQYSSYNFFRPDNEEAMKVRKQCALAALRDVKSYLAKEGGQIAVFDATNTTRERRHMILHFAKENDFKAFFIESVCDDPTVVASNIMEVKISSPDYKDCNSAEAMDDFMKRISCYEASYQPLDPDKCDRDLSLIKVIDVGRRFLVN | |||||||||||||
7 | 2axnA1 | 0.67 | 0.64 | 18.25 | 2.39 | FFAS-3D | ----------ELTQSRVQKIVPVDHRPSLPRSCGPNSPTVIVMVGLPARGKTYISKKLTRYLNWIGVPTKVFNVGEYRREAVKQYSSYNFFRPDNEEAMKVRKQCALAALRDVKSYLAKEGGQIAVFDATNTTRERRHMILHFAKENDFKAFFIESVCDDPTVVASNIMEVKISSPDYKDCNSAEAMDDFMKRISCYEASYQPLDPDKCDRDLSLIKVIDVGRRFLVN | |||||||||||||
8 | 2axnA1 | 0.65 | 0.61 | 17.39 | 0.80 | EigenThreader | RVQKIWVPVDHRPSLPRSCG--------------PNSPTVIVMVGLPARGKTYISKKLTRYLNWIGVPTKVFNVGEYRREAVKQYSSYNFFRPDNEEAMKVRKQCALAALRDVKSYLAKEGGQIAVFDATNTTRERRHMILHFAKENDFKAFFIESVCDDPTVVASNIMEVKISSPDYKDCNSAEAMDDFMKRISCYEASYQPLDPDKCDRDLSLIKVID-VGRRFLV | |||||||||||||
9 | 5htkA | 1.00 | 0.87 | 24.32 | 1.49 | CNFpred | ------------------------------ASYMTNSPTLIVMIGLPARGKTYVSKKLTRYLNWIGVPTKVFNLGVYRREAVKSYKSYDFFRHDNEEAMKIRKQCALVALEDVKAYLTEENGQIAVFDATNTTRERRDMILNFAEQNSFKVFFVESVCDDPDVIAANILEVKVSSPDYPERNRENVMEDFLKRIECYKVTYRPLDPDNYDKDLSFIKVINVGQRFLVN | |||||||||||||
10 | 2axnA1 | 0.72 | 0.60 | 17.06 | 1.17 | DEthreader | -----------------------------------NSPTVIVMVGLPARGKTYISKKLTRYLNWIGVPTKVFNVGEYRREAVK--QYSSNFFRDNEEAMKVRKQCALAALRDVKSYLAKEGGQIAVFDATNTTRERRHMILHFAKENDFKAFFIESVCDDPTVVASNIMEVKISSPDYKDCNSAEAMDDFMKRISCYEASYQPLDPKCDRD-LSLIKVIDVGRRFLVN | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |